RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 TMEM39BQ9GZU3 492 aa16.53■□□□□ 0.24
CPNE1-209ENST00000415920 STAP2Q9UGK3 403 aa16.53■□□□□ 0.24
CPNE1-209ENST00000415920 ZSWIM8A7E2V4 1837 aa16.53■□□□□ 0.24
CPNE1-209ENST00000415920 PDS5AQ29RF7 1337 aaKnown RBP16.52■□□□□ 0.24
CPNE1-209ENST00000415920 RBBP6Q7Z6E9 1792 aaKnown RBP16.52■□□□□ 0.24
CPNE1-209ENST00000415920 TESPA1A2RU30 521 aaPredicted RBP16.52■□□□□ 0.24
CPNE1-209ENST00000415920 TCP10L2B9ZVM9 353 aa16.52■□□□□ 0.24
CPNE1-209ENST00000415920 MAP4K4O95819 1239 aaPredicted RBP16.52■□□□□ 0.24
CPNE1-209ENST00000415920 ZAP70P43403 619 aa16.52■□□□□ 0.24
CPNE1-209ENST00000415920 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.52■□□□□ 0.24
CPNE1-209ENST00000415920 ANKRD13AQ8IZ07 590 aa16.52■□□□□ 0.24
CPNE1-209ENST00000415920 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.52■□□□□ 0.24
CPNE1-209ENST00000415920 OPTNQ96CV9 577 aa16.52■□□□□ 0.24
CPNE1-209ENST00000415920 FOCADQ5VW36 1801 aa16.52■□□□□ 0.23
CPNE1-209ENST00000415920 GOLIM4O00461 696 aa16.51■□□□□ 0.23
CPNE1-209ENST00000415920 CRKP46108 304 aa16.51■□□□□ 0.23
CPNE1-209ENST00000415920 CACNB3P54284 484 aa16.51■□□□□ 0.23
CPNE1-209ENST00000415920 TTC22Q5TAA0 569 aa16.51■□□□□ 0.23
CPNE1-209ENST00000415920 EDC3Q96F86 508 aaKnown RBP16.51■□□□□ 0.23
CPNE1-209ENST00000415920 MS4A4AQ96JQ5 239 aa16.51■□□□□ 0.23
CPNE1-209ENST00000415920 HAUS7Q99871 368 aa16.51■□□□□ 0.23
CPNE1-209ENST00000415920 OSBPL3Q9H4L5 887 aa16.51■□□□□ 0.23
CPNE1-209ENST00000415920 PAG1Q9NWQ8 432 aa16.51■□□□□ 0.23
CPNE1-209ENST00000415920 ABCF2Q9UG63 623 aa16.51■□□□□ 0.23
CPNE1-209ENST00000415920 SERPINA10Q9UK55 444 aa16.51■□□□□ 0.23
CPNE1-209ENST00000415920 PTPN22Q9Y2R2 807 aa16.51■□□□□ 0.23
CPNE1-209ENST00000415920 NAV1Q8NEY1 1877 aa16.5■□□□□ 0.23
CPNE1-209ENST00000415920 UNCXA6NJT0 531 aa16.5■□□□□ 0.23
CPNE1-209ENST00000415920 TRIM6-TRIM34B2RNG4 842 aa16.5■□□□□ 0.23
CPNE1-209ENST00000415920 VGLL4Q14135 290 aa16.5■□□□□ 0.23
CPNE1-209ENST00000415920 WDR66Q8TBY9 1149 aa16.5■□□□□ 0.23
CPNE1-209ENST00000415920 BRI3BPQ8WY22 251 aa16.5■□□□□ 0.23
CPNE1-209ENST00000415920 KIAA0100Q14667 2235 aaKnown RBP16.5■□□□□ 0.23
CPNE1-209ENST00000415920 CYP2E1P05181 493 aaPredicted RBP16.49■□□□□ 0.23
CPNE1-209ENST00000415920 GSPT1P15170 499 aaKnown RBP16.49■□□□□ 0.23
CPNE1-209ENST00000415920 TBC1D22AQ8WUA7 517 aa16.49■□□□□ 0.23
CPNE1-209ENST00000415920 ERO1AQ96HE7 468 aa16.49■□□□□ 0.23
CPNE1-209ENST00000415920 ANTXR1Q9H6X2 564 aa16.49■□□□□ 0.23
CPNE1-209ENST00000415920 PCDH10Q9P2E7 1040 aa16.49■□□□□ 0.23
CPNE1-209ENST00000415920 CENPFP49454 3210 aa16.48■□□□□ 0.23
CPNE1-209ENST00000415920 SP3Q02447 781 aa16.48■□□□□ 0.23
CPNE1-209ENST00000415920 TBC1D9Q6ZT07 1266 aa16.48■□□□□ 0.23
CPNE1-209ENST00000415920 FAM43AQ8N2R8 423 aa16.48■□□□□ 0.23
CPNE1-209ENST00000415920 ZGPATQ8N5A5 531 aaKnown RBP16.48■□□□□ 0.23
CPNE1-209ENST00000415920 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.48■□□□□ 0.232e-14■□□□□ 9.9
CPNE1-209ENST00000415920 RILPL2Q969X0 211 aa16.48■□□□□ 0.23
CPNE1-209ENST00000415920 FSD1Q9BTV5 496 aa16.48■□□□□ 0.23
CPNE1-209ENST00000415920 PIH1D3Q9NQM4 214 aaKnown RBP16.48■□□□□ 0.23
CPNE1-209ENST00000415920 MKI67P46013 3256 aaKnown RBP16.48■□□□□ 0.23
CPNE1-209ENST00000415920 SALL1Q9NSC2 1324 aa16.47■□□□□ 0.23
CPNE1-209ENST00000415920 IDH1O75874 414 aaKnown RBP16.47■□□□□ 0.23
CPNE1-209ENST00000415920 EN2P19622 333 aaPredicted RBP16.47■□□□□ 0.23
CPNE1-209ENST00000415920 PRDX5P30044 214 aa16.47■□□□□ 0.23
CPNE1-209ENST00000415920 TNFAIP1Q13829 316 aa16.47■□□□□ 0.23
CPNE1-209ENST00000415920 TTF1Q15361 905 aaPredicted RBP16.47■□□□□ 0.23
CPNE1-209ENST00000415920 DZIP1Q86YF9 867 aaKnown RBP16.47■□□□□ 0.23
CPNE1-209ENST00000415920 ARMC5Q96C12 935 aa16.47■□□□□ 0.23
CPNE1-209ENST00000415920 OTUD5Q96G74 571 aa16.47■□□□□ 0.23
CPNE1-209ENST00000415920 EFCC1Q9HA90 598 aa16.47■□□□□ 0.23
CPNE1-209ENST00000415920 RAI14Q9P0K7 980 aa16.47■□□□□ 0.23
CPNE1-209ENST00000415920 LRP2BPQ9P2M1 347 aa16.47■□□□□ 0.23
CPNE1-209ENST00000415920 BRCA2P51587 3418 aa16.46■□□□□ 0.23
CPNE1-209ENST00000415920 CCL15-CCL14A0A0B4J2E2 113 aa16.46■□□□□ 0.23
CPNE1-209ENST00000415920 ZBTB22O15209 634 aa16.46■□□□□ 0.23
CPNE1-209ENST00000415920 LDHBP07195 334 aaKnown RBP16.46■□□□□ 0.23
CPNE1-209ENST00000415920 MAP3K9P80192 1104 aa16.46■□□□□ 0.23
CPNE1-209ENST00000415920 CCL15Q16663 113 aa16.46■□□□□ 0.23
CPNE1-209ENST00000415920 OTUD7BQ6GQQ9 843 aa16.46■□□□□ 0.23
CPNE1-209ENST00000415920 ERICH6Q7L0X2 663 aa16.46■□□□□ 0.23
CPNE1-209ENST00000415920 SNCAIPQ9Y6H5 919 aa16.46■□□□□ 0.23
CPNE1-209ENST00000415920 MAST3O60307 1309 aa16.45■□□□□ 0.22
CPNE1-209ENST00000415920 TAF1CQ15572 869 aaPredicted RBP16.45■□□□□ 0.22
CPNE1-209ENST00000415920 SPTY2D1Q68D10 685 aaPredicted RBP16.45■□□□□ 0.22
CPNE1-209ENST00000415920 EVI5LQ96CN4 794 aa16.45■□□□□ 0.22
CPNE1-209ENST00000415920 ARHGAP39Q9C0H5 1083 aa16.45■□□□□ 0.22
CPNE1-209ENST00000415920 PTCH2Q9Y6C5 1203 aa16.45■□□□□ 0.22
CPNE1-209ENST00000415920 RFX7Q2KHR2 1363 aa16.45■□□□□ 0.22
CPNE1-209ENST00000415920 BAZ2AQ9UIF9 1905 aaKnown RBP16.45■□□□□ 0.22
CPNE1-209ENST00000415920 KBTBD3Q8NAB2 608 aa16.44■□□□□ 0.22
CPNE1-209ENST00000415920 ZKSCAN4Q969J2 545 aaPredicted RBP16.44■□□□□ 0.22
CPNE1-209ENST00000415920 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.44■□□□□ 0.222e-7■■■■■ 40.9
CPNE1-209ENST00000415920 MYH1P12882 1939 aa16.44■□□□□ 0.22
CPNE1-209ENST00000415920 SPDYE5A6NIY4 337 aa16.43■□□□□ 0.22
CPNE1-209ENST00000415920 ECM2O94769 699 aaPredicted RBP16.43■□□□□ 0.22
CPNE1-209ENST00000415920 MYCP01106 439 aaPredicted RBP16.43■□□□□ 0.22
CPNE1-209ENST00000415920 SDSP20132 328 aa16.43■□□□□ 0.22
CPNE1-209ENST00000415920 TNNI2P48788 182 aa16.43■□□□□ 0.22
CPNE1-209ENST00000415920 MAP3K12Q12852 859 aa16.43■□□□□ 0.22
CPNE1-209ENST00000415920 BMP2KLQ5H9B9 411 aa16.43■□□□□ 0.22
CPNE1-209ENST00000415920 APOBEC3HQ6NTF7 200 aaKnown RBP16.43■□□□□ 0.22
CPNE1-209ENST00000415920 ZNF333Q96JL9 665 aa16.43■□□□□ 0.22
CPNE1-209ENST00000415920 MYH8P13535 1937 aa16.43■□□□□ 0.22
CPNE1-209ENST00000415920 LAMA4Q16363 1823 aa16.42■□□□□ 0.22
CPNE1-209ENST00000415920 DDX60LQ5H9U9 1706 aaKnown RBP16.42■□□□□ 0.22
CPNE1-209ENST00000415920 GTF2A2P52657 109 aa16.42■□□□□ 0.22
CPNE1-209ENST00000415920 MECOMQ03112 1051 aa16.42■□□□□ 0.22
CPNE1-209ENST00000415920 MAGEB6Q8N7X4 407 aa16.42■□□□□ 0.22
CPNE1-209ENST00000415920 TEKT1Q969V4 418 aa16.42■□□□□ 0.22
CPNE1-209ENST00000415920 ZDHHC15Q96MV8 337 aa16.42■□□□□ 0.22
CPNE1-209ENST00000415920 WRNIP1Q96S55 665 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms