RNA–Protein interactions for RNA: ENST00000415452.5

RUBCN-204, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

TSL 1 (best)

Gene RUBCN, Length 2,665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-204ENST00000415452 GRAPQ13588 217 aa13.27□□□□□ -0.29
RUBCN-204ENST00000415452 SLC27A3Q5K4L6 730 aa13.27□□□□□ -0.29
RUBCN-204ENST00000415452 TMED8Q6PL24 325 aaPredicted RBP13.27□□□□□ -0.29
RUBCN-204ENST00000415452 GRAPLQ8TC17 118 aaPredicted RBP13.27□□□□□ -0.29
RUBCN-204ENST00000415452 BICD2Q8TD16 824 aa13.27□□□□□ -0.29
RUBCN-204ENST00000415452 SDR42E1Q8WUS8 393 aa13.27□□□□□ -0.29
RUBCN-204ENST00000415452 DACT1Q9NYF0 836 aa13.27□□□□□ -0.29
RUBCN-204ENST00000415452 TFCP2L1Q9NZI6 479 aa13.27□□□□□ -0.29
RUBCN-204ENST00000415452 SLC12A7Q9Y666 1083 aa13.27□□□□□ -0.29
RUBCN-204ENST00000415452 CEBPZQ03701 1054 aaKnown RBP13.26□□□□□ -0.29
RUBCN-204ENST00000415452 MAP3K11Q16584 847 aa13.26□□□□□ -0.29
RUBCN-204ENST00000415452 RRP12Q5JTH9 1297 aaKnown RBP13.26□□□□□ -0.29
RUBCN-204ENST00000415452 SYNE3Q6ZMZ3 975 aa13.26□□□□□ -0.29
RUBCN-204ENST00000415452 MICU3Q86XE3 530 aa13.26□□□□□ -0.29
RUBCN-204ENST00000415452 NSUN4Q96CB9 384 aaKnown RBP13.26□□□□□ -0.29
RUBCN-204ENST00000415452 USP28Q96RU2 1077 aa13.26□□□□□ -0.29
RUBCN-204ENST00000415452 BRIP1Q9BX63 1249 aa13.26□□□□□ -0.29
RUBCN-204ENST00000415452 TOMM22Q9NS69 142 aa13.26□□□□□ -0.29
RUBCN-204ENST00000415452 CDC27P30260 824 aa13.26□□□□□ -0.29
RUBCN-204ENST00000415452 PPP4R3BQ5MIZ7 849 aa13.26□□□□□ -0.29
RUBCN-204ENST00000415452 BRAPQ7Z569 592 aa13.26□□□□□ -0.29
RUBCN-204ENST00000415452 TMTC2Q8N394 836 aa13.26□□□□□ -0.29
RUBCN-204ENST00000415452 ZNF384Q8TF68 577 aa13.26□□□□□ -0.29
RUBCN-204ENST00000415452 ERICH2A1L162 156 aa13.26□□□□□ -0.29
RUBCN-204ENST00000415452 GOLGA8AA7E2F4 631 aa13.26□□□□□ -0.29
RUBCN-204ENST00000415452 MINDY4BA8MYZ0 360 aa13.26□□□□□ -0.29
RUBCN-204ENST00000415452 ESPNB1AK53 854 aa13.26□□□□□ -0.29
RUBCN-204ENST00000415452 TPM2P07951 284 aa13.26□□□□□ -0.29
RUBCN-204ENST00000415452 CCDC192P0DO97 292 aa13.26□□□□□ -0.29
RUBCN-204ENST00000415452 RBM6P78332 1123 aaKnown RBP13.26□□□□□ -0.29
RUBCN-204ENST00000415452 HS1BP3Q53T59 392 aa13.26□□□□□ -0.29
RUBCN-204ENST00000415452 OTUD7BQ6GQQ9 843 aa13.26□□□□□ -0.29
RUBCN-204ENST00000415452 TNMDQ9H2S6 317 aa13.26□□□□□ -0.29
RUBCN-204ENST00000415452 RNF216Q9NWF9 866 aaPredicted RBP13.26□□□□□ -0.29
RUBCN-204ENST00000415452 LEMD3Q9Y2U8 911 aa13.26□□□□□ -0.29
RUBCN-204ENST00000415452 IRS2Q9Y4H2 1338 aa13.26□□□□□ -0.29
RUBCN-204ENST00000415452 RXRAP19793 462 aa13.25□□□□□ -0.29
RUBCN-204ENST00000415452 DYNLL1P63167 89 aaKnown RBP13.25□□□□□ -0.29
RUBCN-204ENST00000415452 MECOMQ03112 1051 aa13.25□□□□□ -0.29
RUBCN-204ENST00000415452 WTAPQ15007 396 aa13.25□□□□□ -0.29
RUBCN-204ENST00000415452 PRR5LQ6MZQ0 368 aa13.25□□□□□ -0.29
RUBCN-204ENST00000415452 CLSTN2Q9H4D0 955 aa13.25□□□□□ -0.29
RUBCN-204ENST00000415452 NID2Q14112 1375 aa13.25□□□□□ -0.29
RUBCN-204ENST00000415452 CCDC88AQ3V6T2 1871 aa13.25□□□□□ -0.29
RUBCN-204ENST00000415452 IARSP41252 1262 aaKnown RBP13.25□□□□□ -0.29
RUBCN-204ENST00000415452 NTRK3Q16288 839 aa13.25□□□□□ -0.29
RUBCN-204ENST00000415452 CNPY4Q8N129 248 aa13.25□□□□□ -0.29
RUBCN-204ENST00000415452 ALG1Q9BT22 464 aa13.25□□□□□ -0.29
RUBCN-204ENST00000415452 FTOQ9C0B1 505 aaKnown RBP eCLIP13.25□□□□□ -0.29
RUBCN-204ENST00000415452 FAM217BQ9NTX9 383 aaPredicted RBP13.25□□□□□ -0.29
RUBCN-204ENST00000415452 RTEL1Q9NZ71 1219 aa13.25□□□□□ -0.29
RUBCN-204ENST00000415452 ANKIB1Q9P2G1 1089 aa13.25□□□□□ -0.29
RUBCN-204ENST00000415452 MAST2Q6P0Q8 1798 aa13.24□□□□□ -0.29
RUBCN-204ENST00000415452 IGSF3O75054 1194 aa13.24□□□□□ -0.29
RUBCN-204ENST00000415452 NR1I2O75469 434 aa13.24□□□□□ -0.29
RUBCN-204ENST00000415452 GYS1P13807 737 aa13.24□□□□□ -0.29
RUBCN-204ENST00000415452 CHAF1AQ13111 956 aaPredicted RBP13.24□□□□□ -0.29
RUBCN-204ENST00000415452 CAMK4Q16566 473 aa13.24□□□□□ -0.29
RUBCN-204ENST00000415452 KRT27Q7Z3Y8 459 aa13.24□□□□□ -0.29
RUBCN-204ENST00000415452 TXNRD3Q86VQ6 643 aa13.24□□□□□ -0.29
RUBCN-204ENST00000415452 CCDC144CPQ8IYA2 1237 aa13.24□□□□□ -0.29
RUBCN-204ENST00000415452 ESR2Q92731 530 aa13.24□□□□□ -0.29
RUBCN-204ENST00000415452 STK36Q9NRP7 1315 aa13.24□□□□□ -0.29
RUBCN-204ENST00000415452 RCAN1P53805 252 aa13.24□□□□□ -0.29
RUBCN-204ENST00000415452 SPTY2D1Q68D10 685 aaPredicted RBP13.24□□□□□ -0.29
RUBCN-204ENST00000415452 RBM43Q6ZSC3 357 aaKnown RBP13.24□□□□□ -0.29
RUBCN-204ENST00000415452 BAZ2AQ9UIF9 1905 aaKnown RBP13.23□□□□□ -0.29
RUBCN-204ENST00000415452 BRWD3Q6RI45 1802 aa13.23□□□□□ -0.29
RUBCN-204ENST00000415452 XDHP47989 1333 aa13.23□□□□□ -0.29
RUBCN-204ENST00000415452 PCP11498 1178 aaKnown RBP13.23□□□□□ -0.29
RUBCN-204ENST00000415452 HMGB2P26583 209 aaKnown RBP13.23□□□□□ -0.29
RUBCN-204ENST00000415452 ST5P78524 1137 aa13.23□□□□□ -0.29
RUBCN-204ENST00000415452 KIF23Q02241 960 aaPredicted RBP13.23□□□□□ -0.29
RUBCN-204ENST00000415452 ILDR2Q71H61 639 aa13.23□□□□□ -0.29
RUBCN-204ENST00000415452 STK11IPQ8N1F8 1099 aa13.23□□□□□ -0.29
RUBCN-204ENST00000415452 RPGRQ92834 1020 aaKnown RBP13.23□□□□□ -0.29
RUBCN-204ENST00000415452 PHKBQ93100 1093 aa13.23□□□□□ -0.29
RUBCN-204ENST00000415452 ZKSCAN3Q9BRR0 538 aa13.23□□□□□ -0.29
RUBCN-204ENST00000415452 UBAC1Q9BSL1 405 aa13.23□□□□□ -0.29
RUBCN-204ENST00000415452 MYL10Q9BUA6 226 aa13.23□□□□□ -0.29
RUBCN-204ENST00000415452 BCCIPQ9P287 314 aaKnown RBP eCLIP13.23□□□□□ -0.29
RUBCN-204ENST00000415452 POLR3DP05423 398 aaPredicted RBP13.23□□□□□ -0.29
RUBCN-204ENST00000415452 SSRP1Q08945 709 aaKnown RBP13.23□□□□□ -0.29
RUBCN-204ENST00000415452 MYSM1Q5VVJ2 828 aa13.23□□□□□ -0.29
RUBCN-204ENST00000415452 CCAR1Q8IX12 1150 aaKnown RBP13.23□□□□□ -0.29
RUBCN-204ENST00000415452 CRNKL1Q9BZJ0 848 aaKnown RBP13.23□□□□□ -0.29
RUBCN-204ENST00000415452 GJB4Q9NTQ9 266 aa13.23□□□□□ -0.29
RUBCN-204ENST00000415452 POLR3EQ9NVU0 708 aa13.23□□□□□ -0.29
RUBCN-204ENST00000415452 ECM29Q5VYK3 1845 aa13.22□□□□□ -0.29
RUBCN-204ENST00000415452 SERPINB2P05120 415 aa13.22□□□□□ -0.29
RUBCN-204ENST00000415452 IFNAR1P17181 557 aa13.22□□□□□ -0.29
RUBCN-204ENST00000415452 ME1P48163 572 aa13.22□□□□□ -0.29
RUBCN-204ENST00000415452 CRY2Q49AN0 593 aa13.22□□□□□ -0.29
RUBCN-204ENST00000415452 WASF1Q92558 559 aa13.22□□□□□ -0.29
RUBCN-204ENST00000415452 CCDC196A0A1B0GTZ2 297 aa13.22□□□□□ -0.29
RUBCN-204ENST00000415452 RANBP6O60518 1105 aaKnown RBP13.22□□□□□ -0.29
RUBCN-204ENST00000415452 FMNL1O95466 1100 aaPredicted RBP13.22□□□□□ -0.29
RUBCN-204ENST00000415452 YEATS4O95619 227 aa13.22□□□□□ -0.29
RUBCN-204ENST00000415452 FGRP09769 529 aa13.22□□□□□ -0.29
RUBCN-204ENST00000415452 PRDX5P30044 214 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms