RNA–Protein interactions for RNA: ENST00000415051.5

UBE2D4-202, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-202ENST00000415051 DIS3LQ8TF46 1054 aaKnown RBP21.63■■□□□ 1.05
UBE2D4-202ENST00000415051 GDF15Q99988 308 aa21.63■■□□□ 1.05
UBE2D4-202ENST00000415051 TFRCP02786 760 aaKnown RBP21.62■■□□□ 1.05
UBE2D4-202ENST00000415051 PRDX5P30044 214 aa21.62■■□□□ 1.05
UBE2D4-202ENST00000415051 PUM3Q15397 648 aaKnown RBP21.62■■□□□ 1.05
UBE2D4-202ENST00000415051 PAWRQ96IZ0 340 aaKnown RBP21.62■■□□□ 1.05
UBE2D4-202ENST00000415051 SALL2Q9Y467 1007 aaPredicted RBP21.62■■□□□ 1.05
UBE2D4-202ENST00000415051 AFG3L2Q9Y4W6 797 aa21.62■■□□□ 1.05
UBE2D4-202ENST00000415051 SLURP2P0DP57 97 aa21.61■■□□□ 1.05
UBE2D4-202ENST00000415051 PTPRAP18433 802 aa21.61■■□□□ 1.05
UBE2D4-202ENST00000415051 WDR66Q8TBY9 1149 aa21.61■■□□□ 1.05
UBE2D4-202ENST00000415051 ZHX2Q9Y6X8 837 aa21.61■■□□□ 1.05
UBE2D4-202ENST00000415051 IFIT1P09914 478 aaKnown RBP21.6■■□□□ 1.05
UBE2D4-202ENST00000415051 MNX1P50219 401 aaPredicted RBP21.6■■□□□ 1.05
UBE2D4-202ENST00000415051 SH3BP5LQ7L8J4 393 aa21.6■■□□□ 1.05
UBE2D4-202ENST00000415051 FASTKD5Q7L8L6 764 aaKnown RBP21.6■■□□□ 1.05
UBE2D4-202ENST00000415051 SCYL3Q8IZE3 742 aa21.6■■□□□ 1.05
UBE2D4-202ENST00000415051 SLC45A1Q9Y2W3 748 aa21.6■■□□□ 1.05
UBE2D4-202ENST00000415051 DOCK1Q14185 1865 aa21.6■■□□□ 1.05
UBE2D4-202ENST00000415051 EYSQ5T1H1 3165 aa21.59■■□□□ 1.05
UBE2D4-202ENST00000415051 TNPO2O14787 897 aaKnown RBP21.59■■□□□ 1.05
UBE2D4-202ENST00000415051 CAPN2P17655 700 aa21.59■■□□□ 1.05
UBE2D4-202ENST00000415051 BMP8BP34820 402 aa21.59■■□□□ 1.05
UBE2D4-202ENST00000415051 USP40Q9NVE5 1235 aa21.59■■□□□ 1.05
UBE2D4-202ENST00000415051 RFX7Q2KHR2 1363 aa21.59■■□□□ 1.05
UBE2D4-202ENST00000415051 RFX5P48382 616 aaPredicted RBP21.58■■□□□ 1.05
UBE2D4-202ENST00000415051 MAP3K10Q02779 954 aa21.58■■□□□ 1.05
UBE2D4-202ENST00000415051 GADL1Q6ZQY3 521 aa21.58■■□□□ 1.05
UBE2D4-202ENST00000415051 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.58■■□□□ 1.05
UBE2D4-202ENST00000415051 SPTBN5Q9NRC6 3674 aaKnown RBP21.58■■□□□ 1.04
UBE2D4-202ENST00000415051 GPR153Q6NV75 609 aa21.57■■□□□ 1.04
UBE2D4-202ENST00000415051 Q7L0L9 218 aa21.57■■□□□ 1.04
UBE2D4-202ENST00000415051 LPIN2Q92539 896 aa21.57■■□□□ 1.04
UBE2D4-202ENST00000415051 MYH2Q9UKX2 1941 aa21.57■■□□□ 1.04
UBE2D4-202ENST00000415051 RGS3P49796 1198 aa21.56■■□□□ 1.04
UBE2D4-202ENST00000415051 NECAB2Q7Z6G3 386 aa21.56■■□□□ 1.04
UBE2D4-202ENST00000415051 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.56■■□□□ 1.04
UBE2D4-202ENST00000415051 PICK1Q9NRD5 415 aa21.56■■□□□ 1.04
UBE2D4-202ENST00000415051 DDX60LQ5H9U9 1706 aaKnown RBP21.55■■□□□ 1.04
UBE2D4-202ENST00000415051 SLC5A1P13866 664 aa21.55■■□□□ 1.04
UBE2D4-202ENST00000415051 ATG9AQ7Z3C6 839 aa21.55■■□□□ 1.04
UBE2D4-202ENST00000415051 CCDC84Q86UT8 332 aaPredicted RBP21.55■■□□□ 1.04
UBE2D4-202ENST00000415051 C7orf61Q8IZ16 206 aa21.55■■□□□ 1.04
UBE2D4-202ENST00000415051 DEFB123Q8N688 67 aa21.55■■□□□ 1.04
UBE2D4-202ENST00000415051 ANKRD13CQ8N6S4 541 aa21.55■■□□□ 1.04
UBE2D4-202ENST00000415051 IDI2Q9BXS1 227 aa21.55■■□□□ 1.04
UBE2D4-202ENST00000415051 ZMYND8Q9ULU4 1186 aaPredicted RBP21.55■■□□□ 1.04
UBE2D4-202ENST00000415051 PLXNB2O15031 1838 aa21.55■■□□□ 1.04
UBE2D4-202ENST00000415051 DNAH12Q6ZR08 3092 aa21.54■■□□□ 1.04
UBE2D4-202ENST00000415051 DDTLA6NHG4 134 aaPredicted RBP21.54■■□□□ 1.04
UBE2D4-202ENST00000415051 EYA2O00167 538 aa21.54■■□□□ 1.04
UBE2D4-202ENST00000415051 LDHBP07195 334 aaKnown RBP21.54■■□□□ 1.04
UBE2D4-202ENST00000415051 TREML2Q5T2D2 321 aa21.54■■□□□ 1.04
UBE2D4-202ENST00000415051 SMCR8Q8TEV9 937 aaPredicted RBP21.54■■□□□ 1.04
UBE2D4-202ENST00000415051 USP44Q9H0E7 712 aa21.54■■□□□ 1.04
UBE2D4-202ENST00000415051 TAOK2Q9UL54 1235 aa21.54■■□□□ 1.04
UBE2D4-202ENST00000415051 SALL1Q9NSC2 1324 aa21.54■■□□□ 1.04
UBE2D4-202ENST00000415051 LOC285556D6RIA3 1793 aa21.53■■□□□ 1.04
UBE2D4-202ENST00000415051 TRIM75PA6NK02 468 aa21.53■■□□□ 1.04
UBE2D4-202ENST00000415051 ENTPD3O75355 529 aa21.53■■□□□ 1.04
UBE2D4-202ENST00000415051 TRIM32Q13049 653 aa21.53■■□□□ 1.04
UBE2D4-202ENST00000415051 ANKLE1Q8NAG6 615 aa21.53■■□□□ 1.04
UBE2D4-202ENST00000415051 DDX4Q9NQI0 724 aaKnown RBP21.53■■□□□ 1.04
UBE2D4-202ENST00000415051 AGTPBP1Q9UPW5 1226 aa21.53■■□□□ 1.04
UBE2D4-202ENST00000415051 GAKO14976 1311 aa21.53■■□□□ 1.04
UBE2D4-202ENST00000415051 CTNND1O60716 968 aaKnown RBP21.52■■□□□ 1.04
UBE2D4-202ENST00000415051 ZEB1P37275 1124 aaPredicted RBP21.52■■□□□ 1.04
UBE2D4-202ENST00000415051 LRIT3Q3SXY7 679 aa21.52■■□□□ 1.04
UBE2D4-202ENST00000415051 COA7Q96BR5 231 aa21.52■■□□□ 1.04
UBE2D4-202ENST00000415051 GJD2Q9UKL4 321 aa21.52■■□□□ 1.04
UBE2D4-202ENST00000415051 STXBP5LQ9Y2K9 1186 aa21.52■■□□□ 1.04
UBE2D4-202ENST00000415051 SYN1P17600 705 aa21.51■■□□□ 1.03
UBE2D4-202ENST00000415051 MAGEA10P43363 369 aaPredicted RBP21.51■■□□□ 1.03
UBE2D4-202ENST00000415051 FAM110CQ1W6H9 321 aa21.51■■□□□ 1.03
UBE2D4-202ENST00000415051 MRPL50Q8N5N7 158 aaKnown RBP21.51■■□□□ 1.03
UBE2D4-202ENST00000415051 MTMR10Q9NXD2 777 aa21.51■■□□□ 1.03
UBE2D4-202ENST00000415051 HMGCRP04035 888 aa21.5■■□□□ 1.03
UBE2D4-202ENST00000415051 PHKA1P46020 1223 aa21.5■■□□□ 1.03
UBE2D4-202ENST00000415051 LRRFIP2Q9Y608 721 aaKnown RBP21.5■■□□□ 1.03
UBE2D4-202ENST00000415051 CDH23Q9H251 3354 aa21.5■■□□□ 1.03
UBE2D4-202ENST00000415051 ZSCAN29Q8IWY8 852 aaPredicted RBP21.48■■□□□ 1.03
UBE2D4-202ENST00000415051 TDHQ8IZJ6 230 aa21.48■■□□□ 1.03
UBE2D4-202ENST00000415051 NBPF3Q9H094 633 aa21.48■■□□□ 1.03
UBE2D4-202ENST00000415051 RPTORQ8N122 1335 aa21.48■■□□□ 1.03
UBE2D4-202ENST00000415051 ATAD5Q96QE3 1844 aa21.48■■□□□ 1.03
UBE2D4-202ENST00000415051 ZBTB22O15209 634 aa21.47■■□□□ 1.03
UBE2D4-202ENST00000415051 ATP2B3Q16720 1220 aa21.47■■□□□ 1.03
UBE2D4-202ENST00000415051 C11orf49Q9H6J7 331 aa21.47■■□□□ 1.03
UBE2D4-202ENST00000415051 OGDHLQ9ULD0 1010 aa21.47■■□□□ 1.03
UBE2D4-202ENST00000415051 DENND2AQ9ULE3 1009 aa21.47■■□□□ 1.03
UBE2D4-202ENST00000415051 PFASO15067 1338 aa21.47■■□□□ 1.03
UBE2D4-202ENST00000415051 PRUNE2Q8WUY3 3088 aa21.46■■□□□ 1.03
UBE2D4-202ENST00000415051 SEMA3EO15041 775 aa21.46■■□□□ 1.03
UBE2D4-202ENST00000415051 PROCA1Q8NCQ7 364 aaPredicted RBP21.46■■□□□ 1.03
UBE2D4-202ENST00000415051 COL25A1Q9BXS0 654 aaPredicted RBP21.46■■□□□ 1.03
UBE2D4-202ENST00000415051 HMX1Q9NP08 348 aaPredicted RBP21.46■■□□□ 1.03
UBE2D4-202ENST00000415051 PNMA3Q9UL41 463 aa21.46■■□□□ 1.03
UBE2D4-202ENST00000415051 FAM196BA6NMK8 535 aa21.45■■□□□ 1.02
UBE2D4-202ENST00000415051 TBC1D12O60347 775 aa21.45■■□□□ 1.02
UBE2D4-202ENST00000415051 ADORA1P30542 326 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms