RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 TTLL7Q6ZT98 887 aa19.47■□□□□ 0.71
PHRF1-202ENST00000413872 DIS3L2Q8IYB7 885 aaKnown RBP19.47■□□□□ 0.71
PHRF1-202ENST00000413872 FRMD4BQ9Y2L6 1034 aa19.47■□□□□ 0.71
PHRF1-202ENST00000413872 KCNQ3O43525 872 aa19.47■□□□□ 0.71
PHRF1-202ENST00000413872 C2CD5Q86YS7 1000 aa19.47■□□□□ 0.71
PHRF1-202ENST00000413872 TGFBRAP1Q8WUH2 860 aa19.47■□□□□ 0.71
PHRF1-202ENST00000413872 CCDC42Q96M95 316 aa19.47■□□□□ 0.71
PHRF1-202ENST00000413872 AS3MTQ9HBK9 375 aa19.47■□□□□ 0.71
PHRF1-202ENST00000413872 KRT86O43790 486 aa19.46■□□□□ 0.71
PHRF1-202ENST00000413872 SKILP12757 684 aa19.46■□□□□ 0.71
PHRF1-202ENST00000413872 CCDC24Q8N4L8 307 aa19.46■□□□□ 0.71
PHRF1-202ENST00000413872 CHURC1Q8WUH1 139 aa19.46■□□□□ 0.71
PHRF1-202ENST00000413872 USP40Q9NVE5 1235 aa19.46■□□□□ 0.71
PHRF1-202ENST00000413872 KIF5AQ12840 1032 aa19.46■□□□□ 0.71
PHRF1-202ENST00000413872 CNNM4Q6P4Q7 775 aa19.46■□□□□ 0.71
PHRF1-202ENST00000413872 CHD1O14646 1710 aa19.46■□□□□ 0.71
PHRF1-202ENST00000413872 SYNMO15061 1565 aa19.46■□□□□ 0.71
PHRF1-202ENST00000413872 CCDC175P0C221 793 aa19.46■□□□□ 0.71
PHRF1-202ENST00000413872 IFT74Q96LB3 600 aa19.46■□□□□ 0.71
PHRF1-202ENST00000413872 EXOC7Q9UPT5 735 aa19.46■□□□□ 0.71
PHRF1-202ENST00000413872 CUTAO60888 179 aa19.45■□□□□ 0.7
PHRF1-202ENST00000413872 UBE4AQ14139 1066 aa19.45■□□□□ 0.7
PHRF1-202ENST00000413872 CEP135Q66GS9 1140 aa19.45■□□□□ 0.7
PHRF1-202ENST00000413872 DCAF15Q66K64 600 aa19.45■□□□□ 0.7
PHRF1-202ENST00000413872 GIGYF2Q6Y7W6 1299 aaKnown RBP19.45■□□□□ 0.7
PHRF1-202ENST00000413872 PIK3AP1Q6ZUJ8 805 aa19.45■□□□□ 0.7
PHRF1-202ENST00000413872 CRKLP46109 303 aaKnown RBP19.45■□□□□ 0.7
PHRF1-202ENST00000413872 TFAP4Q01664 338 aa19.45■□□□□ 0.7
PHRF1-202ENST00000413872 TTC38Q5R3I4 469 aa19.45■□□□□ 0.7
PHRF1-202ENST00000413872 BIN2Q9UBW5 565 aaPredicted RBP19.45■□□□□ 0.7
PHRF1-202ENST00000413872 SEMA3EO15041 775 aa19.45■□□□□ 0.7
PHRF1-202ENST00000413872 SP4Q02446 784 aa19.45■□□□□ 0.7
PHRF1-202ENST00000413872 GPHNQ9NQX3 736 aaPredicted RBP19.45■□□□□ 0.7
PHRF1-202ENST00000413872 KCNG1Q9UIX4 513 aa19.45■□□□□ 0.7
PHRF1-202ENST00000413872 RASAL2Q9UJF2 1139 aa19.45■□□□□ 0.7
PHRF1-202ENST00000413872 THRAP3Q9Y2W1 955 aaKnown RBP19.44■□□□□ 0.7
PHRF1-202ENST00000413872 SSH2Q76I76 1423 aa19.44■□□□□ 0.7
PHRF1-202ENST00000413872 KIF1BO60333 1816 aa19.44■□□□□ 0.7
PHRF1-202ENST00000413872 EPB41P11171 864 aaKnown RBP19.44■□□□□ 0.7
PHRF1-202ENST00000413872 LMAN1P49257 510 aa19.44■□□□□ 0.7
PHRF1-202ENST00000413872 UBXN1Q04323 297 aa19.44■□□□□ 0.7
PHRF1-202ENST00000413872 PPARAQ07869 468 aa19.44■□□□□ 0.7
PHRF1-202ENST00000413872 DPY19L2Q6NUT2 758 aa19.44■□□□□ 0.7
PHRF1-202ENST00000413872 CPA1P15085 419 aa19.44■□□□□ 0.7
PHRF1-202ENST00000413872 MYL5Q02045 173 aa19.44■□□□□ 0.7
PHRF1-202ENST00000413872 ZNF408Q9H9D4 720 aa19.44■□□□□ 0.7
PHRF1-202ENST00000413872 TSNARE1Q96NA8 513 aa19.44■□□□□ 0.7
PHRF1-202ENST00000413872 GPR108Q9NPR9 543 aa19.44■□□□□ 0.7
PHRF1-202ENST00000413872 COPRSQ9NQ92 184 aa19.44■□□□□ 0.7
PHRF1-202ENST00000413872 ERBB3P21860 1342 aa19.44■□□□□ 0.7
PHRF1-202ENST00000413872 ARHGAP31Q2M1Z3 1444 aa19.43■□□□□ 0.7
PHRF1-202ENST00000413872 HSPA4P34932 840 aa19.43■□□□□ 0.7
PHRF1-202ENST00000413872 FAM212AQ96EL1 285 aa19.43■□□□□ 0.7
PHRF1-202ENST00000413872 IKBKGQ9Y6K9 419 aa19.43■□□□□ 0.7
PHRF1-202ENST00000413872 PABPN1LA6NDY0 278 aaKnown RBP19.43■□□□□ 0.7
PHRF1-202ENST00000413872 PCP11498 1178 aaKnown RBP19.43■□□□□ 0.7
PHRF1-202ENST00000413872 CTDSPL2Q05D32 466 aa19.43■□□□□ 0.7
PHRF1-202ENST00000413872 CSADQ9Y600 493 aa19.43■□□□□ 0.7
PHRF1-202ENST00000413872 NOP56O00567 594 aaKnown RBP19.43■□□□□ 0.7
PHRF1-202ENST00000413872 CCNT1O60563 726 aaKnown RBP19.43■□□□□ 0.7
PHRF1-202ENST00000413872 CIAO1O76071 339 aa19.43■□□□□ 0.7
PHRF1-202ENST00000413872 USPL1Q5W0Q7 1092 aa19.43■□□□□ 0.7
PHRF1-202ENST00000413872 CCDC186Q7Z3E2 898 aa19.43■□□□□ 0.7
PHRF1-202ENST00000413872 LUC7L2Q9Y383 392 aaKnown RBP19.43■□□□□ 0.7
PHRF1-202ENST00000413872 ARAP3Q8WWN8 1544 aa19.43■□□□□ 0.7
PHRF1-202ENST00000413872 ARHGEF35A5YM69 484 aa19.43■□□□□ 0.7
PHRF1-202ENST00000413872 IRX3P78415 501 aaPredicted RBP19.43■□□□□ 0.7
PHRF1-202ENST00000413872 TCP10Q12799 353 aa19.43■□□□□ 0.7
PHRF1-202ENST00000413872 HSP90AA4PQ58FG1 418 aa19.43■□□□□ 0.7
PHRF1-202ENST00000413872 FNBP1Q96RU3 617 aa19.43■□□□□ 0.7
PHRF1-202ENST00000413872 BCS1LQ9Y276 419 aa19.43■□□□□ 0.7
PHRF1-202ENST00000413872 LEMD3Q9Y2U8 911 aa19.43■□□□□ 0.7
PHRF1-202ENST00000413872 COMMD10Q9Y6G5 202 aa19.43■□□□□ 0.7
PHRF1-202ENST00000413872 TUBB4BP68371 445 aa19.42■□□□□ 0.7
PHRF1-202ENST00000413872 RXRBP28702 533 aa19.42■□□□□ 0.7
PHRF1-202ENST00000413872 CA8P35219 290 aa19.42■□□□□ 0.7
PHRF1-202ENST00000413872 PRIMPOLQ96LW4 560 aa19.42■□□□□ 0.7
PHRF1-202ENST00000413872 NOD1Q9Y239 953 aa19.42■□□□□ 0.7
PHRF1-202ENST00000413872 CNGA4Q8IV77 575 aa19.42■□□□□ 0.7
PHRF1-202ENST00000413872 KCNH3Q9ULD8 1083 aa19.42■□□□□ 0.7
PHRF1-202ENST00000413872 RNF123Q5XPI4 1314 aa19.42■□□□□ 0.7
PHRF1-202ENST00000413872 TRAF5O00463 557 aa19.41■□□□□ 0.7
PHRF1-202ENST00000413872 STX17P56962 302 aa19.41■□□□□ 0.7
PHRF1-202ENST00000413872 ZYXQ15942 572 aaKnown RBP19.41■□□□□ 0.7
PHRF1-202ENST00000413872 TMX1Q9H3N1 280 aa19.41■□□□□ 0.7
PHRF1-202ENST00000413872 CTAGE15A4D2H0 777 aa19.41■□□□□ 0.7
PHRF1-202ENST00000413872 CTAGE8P0CG41 777 aa19.41■□□□□ 0.7
PHRF1-202ENST00000413872 ARID4AP29374 1257 aaPredicted RBP19.41■□□□□ 0.7
PHRF1-202ENST00000413872 WDR44Q5JSH3 913 aa19.41■□□□□ 0.7
PHRF1-202ENST00000413872 CTAGE6Q86UF2 777 aa19.41■□□□□ 0.7
PHRF1-202ENST00000413872 CTAGE4Q8IX94 777 aa19.41■□□□□ 0.7
PHRF1-202ENST00000413872 HAUS7Q99871 368 aa19.41■□□□□ 0.7
PHRF1-202ENST00000413872 E7EWF7 191 aa19.41■□□□□ 0.7
PHRF1-202ENST00000413872 VWA3BQ502W6 1294 aa19.41■□□□□ 0.7
PHRF1-202ENST00000413872 SRRTQ9BXP5 876 aaKnown RBP19.41■□□□□ 0.7
PHRF1-202ENST00000413872 XDHP47989 1333 aa19.41■□□□□ 0.7
PHRF1-202ENST00000413872 PDE4DQ08499 809 aa19.41■□□□□ 0.7
PHRF1-202ENST00000413872 CDAN1Q8IWY9 1227 aa19.41■□□□□ 0.7
PHRF1-202ENST00000413872 PLEKHF1Q96S99 279 aa19.41■□□□□ 0.7
PHRF1-202ENST00000413872 LRWD1Q9UFC0 647 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms