RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 CREBRFQ8IUR6 639 aa16.75■□□□□ 0.27
SEMA3F-202ENST00000413852 MAN1B1Q9UKM7 699 aa16.75■□□□□ 0.27
SEMA3F-202ENST00000413852 H3BQF6 201 aa16.75■□□□□ 0.27
SEMA3F-202ENST00000413852 CCDC57Q2TAC2 916 aa16.75■□□□□ 0.27
SEMA3F-202ENST00000413852 LRRFIP1Q32MZ4 808 aaKnown RBP16.75■□□□□ 0.27
SEMA3F-202ENST00000413852 KRBA2Q6ZNG9 492 aa16.75■□□□□ 0.27
SEMA3F-202ENST00000413852 CCDC12Q8WUD4 166 aaPredicted RBP16.75■□□□□ 0.27
SEMA3F-202ENST00000413852 TEX13AQ9BXU3 409 aaPredicted RBP16.75■□□□□ 0.27
SEMA3F-202ENST00000413852 LCMT1Q9UIC8 334 aa16.75■□□□□ 0.27
SEMA3F-202ENST00000413852 RFX7Q2KHR2 1363 aa16.75■□□□□ 0.27
SEMA3F-202ENST00000413852 FAM205CA6NFA0 338 aa16.75■□□□□ 0.27
SEMA3F-202ENST00000413852 DHX16O60231 1041 aaKnown RBP16.75■□□□□ 0.27
SEMA3F-202ENST00000413852 SMC1AQ14683 1233 aaKnown RBP16.75■□□□□ 0.27
SEMA3F-202ENST00000413852 APOA5Q6Q788 366 aa16.74■□□□□ 0.27
SEMA3F-202ENST00000413852 PIH1D3Q9NQM4 214 aaKnown RBP16.74■□□□□ 0.27
SEMA3F-202ENST00000413852 TOMM22Q9NS69 142 aa16.74■□□□□ 0.27
SEMA3F-202ENST00000413852 N4BP1O75113 896 aaKnown RBP16.74■□□□□ 0.27
SEMA3F-202ENST00000413852 RESP18Q5W5W9 173 aa16.74■□□□□ 0.27
SEMA3F-202ENST00000413852 CCDC102BQ68D86 513 aa16.74■□□□□ 0.27
SEMA3F-202ENST00000413852 PLCD3Q8N3E9 789 aa16.74■□□□□ 0.27
SEMA3F-202ENST00000413852 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.74■□□□□ 0.27
SEMA3F-202ENST00000413852 FAM217BQ9NTX9 383 aaPredicted RBP16.74■□□□□ 0.27
SEMA3F-202ENST00000413852 AFMP43652 599 aa16.74■□□□□ 0.27
SEMA3F-202ENST00000413852 TOB1P50616 345 aaPredicted RBP16.74■□□□□ 0.27
SEMA3F-202ENST00000413852 MCM6Q14566 821 aa16.74■□□□□ 0.27
SEMA3F-202ENST00000413852 UBN2Q6ZU65 1347 aa16.74■□□□□ 0.27
SEMA3F-202ENST00000413852 OXER1Q8TDS5 423 aa16.74■□□□□ 0.27
SEMA3F-202ENST00000413852 ARGLU1Q9NWB6 273 aaPredicted RBP16.74■□□□□ 0.27
SEMA3F-202ENST00000413852 WWC3Q9ULE0 1092 aa16.74■□□□□ 0.27
SEMA3F-202ENST00000413852 ANGEL1Q9UNK9 670 aaKnown RBP16.74■□□□□ 0.27
SEMA3F-202ENST00000413852 APPBP2Q92624 585 aa16.73■□□□□ 0.27
SEMA3F-202ENST00000413852 KIFC2Q96AC6 838 aa16.73■□□□□ 0.27
SEMA3F-202ENST00000413852 PCDHB6Q9Y5E3 794 aa16.73■□□□□ 0.27
SEMA3F-202ENST00000413852 GOLGA8AA7E2F4 631 aa16.73■□□□□ 0.27
SEMA3F-202ENST00000413852 EFCAB8A8MWE9 144 aa16.73■□□□□ 0.27
SEMA3F-202ENST00000413852 RNF216Q9NWF9 866 aaPredicted RBP16.73■□□□□ 0.27
SEMA3F-202ENST00000413852 IARSP41252 1262 aaKnown RBP16.72■□□□□ 0.27
SEMA3F-202ENST00000413852 RAD51AP2Q09MP3 1159 aa16.72■□□□□ 0.27
SEMA3F-202ENST00000413852 TRDNQ13061 729 aa16.72■□□□□ 0.27
SEMA3F-202ENST00000413852 TAF3Q5VWG9 929 aa16.72■□□□□ 0.27
SEMA3F-202ENST00000413852 DCAF5Q96JK2 942 aa16.72■□□□□ 0.27
SEMA3F-202ENST00000413852 C19orf44Q9H6X5 657 aa16.72■□□□□ 0.27
SEMA3F-202ENST00000413852 SIPA1L3O60292 1781 aaPredicted RBP16.72■□□□□ 0.27
SEMA3F-202ENST00000413852 TRIM66O15016 1216 aa16.72■□□□□ 0.27
SEMA3F-202ENST00000413852 MAP3K9P80192 1104 aa16.72■□□□□ 0.27
SEMA3F-202ENST00000413852 SKIDA1Q1XH10 827 aa16.72■□□□□ 0.27
SEMA3F-202ENST00000413852 CHMP4CQ96CF2 233 aa16.72■□□□□ 0.27
SEMA3F-202ENST00000413852 MRFAP1Q9Y605 127 aa16.72■□□□□ 0.27
SEMA3F-202ENST00000413852 ZMYM6O95789 1325 aa16.72■□□□□ 0.27
SEMA3F-202ENST00000413852 SH2B2O14492 632 aaPredicted RBP16.72■□□□□ 0.27
SEMA3F-202ENST00000413852 CDC25AP30304 524 aa16.72■□□□□ 0.27
SEMA3F-202ENST00000413852 RAD9BQ6WBX8 426 aa16.72■□□□□ 0.27
SEMA3F-202ENST00000413852 ANKRD65E5RJM6 399 aa16.71■□□□□ 0.27
SEMA3F-202ENST00000413852 ARHGAP6O43182 974 aa16.71■□□□□ 0.27
SEMA3F-202ENST00000413852 CBFA2T2O43439 604 aa16.71■□□□□ 0.27
SEMA3F-202ENST00000413852 PRKAB2O43741 272 aa16.71■□□□□ 0.27
SEMA3F-202ENST00000413852 PHACTR2O75167 634 aa16.71■□□□□ 0.27
SEMA3F-202ENST00000413852 RHOXF2BP0C7M4 288 aa16.71■□□□□ 0.27
SEMA3F-202ENST00000413852 LMAN1P49257 510 aa16.71■□□□□ 0.27
SEMA3F-202ENST00000413852 MDM2Q00987 491 aaPredicted RBP16.71■□□□□ 0.27
SEMA3F-202ENST00000413852 TMEM67Q5HYA8 995 aa16.71■□□□□ 0.27
SEMA3F-202ENST00000413852 RHOXF2Q9BQY4 288 aa16.71■□□□□ 0.27
SEMA3F-202ENST00000413852 CALCOCO1Q9P1Z2 691 aa16.71■□□□□ 0.27
SEMA3F-202ENST00000413852 ZBTB43O43298 467 aa16.71■□□□□ 0.27
SEMA3F-202ENST00000413852 METTL24Q5JXM2 366 aa16.71■□□□□ 0.27
SEMA3F-202ENST00000413852 ANKLE2Q86XL3 938 aa16.71■□□□□ 0.27
SEMA3F-202ENST00000413852 HINFPQ9BQA5 517 aa16.71■□□□□ 0.27
SEMA3F-202ENST00000413852 TRIM34Q9BYJ4 488 aa16.71■□□□□ 0.27
SEMA3F-202ENST00000413852 ZNF532Q9HCE3 1301 aa16.7■□□□□ 0.26
SEMA3F-202ENST00000413852 ZSCAN12O43309 604 aa16.7■□□□□ 0.26
SEMA3F-202ENST00000413852 TBX2Q13207 712 aaPredicted RBP16.7■□□□□ 0.26
SEMA3F-202ENST00000413852 NTRK3Q16288 839 aa16.7■□□□□ 0.26
SEMA3F-202ENST00000413852 FUT8Q9BYC5 575 aa16.7■□□□□ 0.26
SEMA3F-202ENST00000413852 POSTNQ15063 836 aa16.7■□□□□ 0.26
SEMA3F-202ENST00000413852 NOM1Q5C9Z4 860 aaKnown RBP16.7■□□□□ 0.26
SEMA3F-202ENST00000413852 PNKPQ96T60 521 aa16.7■□□□□ 0.26
SEMA3F-202ENST00000413852 PLEKHA4Q9H4M7 779 aa16.7■□□□□ 0.26
SEMA3F-202ENST00000413852 TFR2Q9UP52 801 aa16.7■□□□□ 0.26
SEMA3F-202ENST00000413852 A0A087X0B3 334 aa16.7■□□□□ 0.26
SEMA3F-202ENST00000413852 RBL2Q08999 1139 aa16.7■□□□□ 0.26
SEMA3F-202ENST00000413852 SPECC1LQ69YQ0 1117 aa16.7■□□□□ 0.26
SEMA3F-202ENST00000413852 FOXR1Q6PIV2 292 aa16.7■□□□□ 0.26
SEMA3F-202ENST00000413852 CDC5LQ99459 802 aaKnown RBP16.7■□□□□ 0.26
SEMA3F-202ENST00000413852 ZSWIM5Q9P217 1185 aa16.7■□□□□ 0.26
SEMA3F-202ENST00000413852 ARFGEF2Q9Y6D5 1785 aa16.69■□□□□ 0.26
SEMA3F-202ENST00000413852 WNT7AO00755 349 aa16.69■□□□□ 0.26
SEMA3F-202ENST00000413852 CD44P16070 742 aaKnown RBP16.69■□□□□ 0.26
SEMA3F-202ENST00000413852 PHKA1P46020 1223 aa16.69■□□□□ 0.26
SEMA3F-202ENST00000413852 TRIM29Q14134 588 aa16.69■□□□□ 0.26
SEMA3F-202ENST00000413852 DIS3L2Q8IYB7 885 aaKnown RBP16.69■□□□□ 0.26
SEMA3F-202ENST00000413852 ACRBPQ8NEB7 543 aa16.69■□□□□ 0.26
SEMA3F-202ENST00000413852 IGDCC4Q8TDY8 1250 aa16.69■□□□□ 0.26
SEMA3F-202ENST00000413852 NUP133Q8WUM0 1156 aa16.69■□□□□ 0.26
SEMA3F-202ENST00000413852 EPSTI1Q96J88 318 aa16.69■□□□□ 0.26
SEMA3F-202ENST00000413852 IFIT3O14879 490 aaKnown RBP16.69■□□□□ 0.26
SEMA3F-202ENST00000413852 LONRF2Q1L5Z9 754 aa16.69■□□□□ 0.26
SEMA3F-202ENST00000413852 GREM2Q9H772 168 aa16.69■□□□□ 0.26
SEMA3F-202ENST00000413852 LY9Q9HBG7 655 aa16.69■□□□□ 0.26
SEMA3F-202ENST00000413852 PDE11AQ9HCR9 933 aa16.69■□□□□ 0.26
SEMA3F-202ENST00000413852 GPR108Q9NPR9 543 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms