RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 PRRT2Q7Z6L0 340 aaPredicted RBP12.01□□□□□ -0.49
RFFL-203ENST00000413582 KLHDC4Q8TBB5 520 aa12.01□□□□□ -0.49
RFFL-203ENST00000413582 PAK6Q9NQU5 681 aaPredicted RBP12.01□□□□□ -0.49
RFFL-203ENST00000413582 FAM198AQ9UFP1 575 aa12.01□□□□□ -0.49
RFFL-203ENST00000413582 RFX7Q2KHR2 1363 aa12.01□□□□□ -0.49
RFFL-203ENST00000413582 MYH2Q9UKX2 1941 aa12□□□□□ -0.49
RFFL-203ENST00000413582 IFIT1P09914 478 aaKnown RBP12□□□□□ -0.49
RFFL-203ENST00000413582 PRDX5P30044 214 aa12□□□□□ -0.49
RFFL-203ENST00000413582 IRF5Q13568 498 aa12□□□□□ -0.49
RFFL-203ENST00000413582 WDR66Q8TBY9 1149 aa12□□□□□ -0.49
RFFL-203ENST00000413582 PXYLP1Q8TE99 480 aa12□□□□□ -0.49
RFFL-203ENST00000413582 PHF20L1A8MW92 1017 aa11.99□□□□□ -0.49
RFFL-203ENST00000413582 TNPO2O14787 897 aaKnown RBP11.99□□□□□ -0.49
RFFL-203ENST00000413582 ZFPM1Q8IX07 1006 aa11.99□□□□□ -0.49
RFFL-203ENST00000413582 SCYL3Q8IZE3 742 aa11.99□□□□□ -0.49
RFFL-203ENST00000413582 DEFB118Q96PH6 123 aa11.99□□□□□ -0.49
RFFL-203ENST00000413582 CRISPLD2Q9H0B8 497 aa11.99□□□□□ -0.49
RFFL-203ENST00000413582 STAP2Q9UGK3 403 aa11.99□□□□□ -0.49
RFFL-203ENST00000413582 SLC45A1Q9Y2W3 748 aa11.99□□□□□ -0.49
RFFL-203ENST00000413582 SALL2Q9Y467 1007 aaPredicted RBP11.99□□□□□ -0.49
RFFL-203ENST00000413582 LOC285556D6RIA3 1793 aa11.99□□□□□ -0.49
RFFL-203ENST00000413582 DDX60LQ5H9U9 1706 aaKnown RBP11.98□□□□□ -0.49
RFFL-203ENST00000413582 TFRCP02786 760 aaKnown RBP11.98□□□□□ -0.49
RFFL-203ENST00000413582 CAPN2P17655 700 aa11.98□□□□□ -0.49
RFFL-203ENST00000413582 PTPRAP18433 802 aa11.98□□□□□ -0.49
RFFL-203ENST00000413582 FASTKD5Q7L8L6 764 aaKnown RBP11.98□□□□□ -0.49
RFFL-203ENST00000413582 DIS3LQ8TF46 1054 aaKnown RBP11.98□□□□□ -0.49
RFFL-203ENST00000413582 PAWRQ96IZ0 340 aaKnown RBP11.98□□□□□ -0.49
RFFL-203ENST00000413582 AFG3L2Q9Y4W6 797 aa11.98□□□□□ -0.49
RFFL-203ENST00000413582 ZHX2Q9Y6X8 837 aa11.98□□□□□ -0.49
RFFL-203ENST00000413582 SLC5A1P13866 664 aa11.97□□□□□ -0.49
RFFL-203ENST00000413582 MNX1P50219 401 aaPredicted RBP11.97□□□□□ -0.49
RFFL-203ENST00000413582 GADL1Q6ZQY3 521 aa11.97□□□□□ -0.49
RFFL-203ENST00000413582 LPIN2Q92539 896 aa11.97□□□□□ -0.49
RFFL-203ENST00000413582 GDF15Q99988 308 aa11.97□□□□□ -0.49
RFFL-203ENST00000413582 PICK1Q9NRD5 415 aa11.97□□□□□ -0.49
RFFL-203ENST00000413582 USP40Q9NVE5 1235 aa11.97□□□□□ -0.49
RFFL-203ENST00000413582 SALL1Q9NSC2 1324 aa11.96□□□□□ -0.49
RFFL-203ENST00000413582 PLXNB2O15031 1838 aa11.96□□□□□ -0.49
RFFL-203ENST00000413582 EYA2O00167 538 aa11.96□□□□□ -0.49
RFFL-203ENST00000413582 ANP32CO43423 234 aa11.96□□□□□ -0.49
RFFL-203ENST00000413582 LDHBP07195 334 aaKnown RBP11.96□□□□□ -0.49
RFFL-203ENST00000413582 BMP8BP34820 402 aa11.96□□□□□ -0.49
RFFL-203ENST00000413582 RFX5P48382 616 aaPredicted RBP11.96□□□□□ -0.49
RFFL-203ENST00000413582 RGS3P49796 1198 aa11.96□□□□□ -0.49
RFFL-203ENST00000413582 GPR153Q6NV75 609 aa11.96□□□□□ -0.49
RFFL-203ENST00000413582 SH3BP5LQ7L8J4 393 aa11.96□□□□□ -0.49
RFFL-203ENST00000413582 SMCR8Q8TEV9 937 aaPredicted RBP11.96□□□□□ -0.49
RFFL-203ENST00000413582 IDI2Q9BXS1 227 aa11.96□□□□□ -0.49
RFFL-203ENST00000413582 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.96□□□□□ -0.49
RFFL-203ENST00000413582 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.96□□□□□ -0.49
RFFL-203ENST00000413582 ATAD5Q96QE3 1844 aa11.95□□□□□ -0.5
RFFL-203ENST00000413582 GAKO14976 1311 aa11.95□□□□□ -0.5
RFFL-203ENST00000413582 TRIM75PA6NK02 468 aa11.95□□□□□ -0.5
RFFL-203ENST00000413582 ENTPD3O75355 529 aa11.95□□□□□ -0.5
RFFL-203ENST00000413582 SLURP2P0DP57 97 aa11.95□□□□□ -0.5
RFFL-203ENST00000413582 HOXD11P31277 338 aaPredicted RBP11.95□□□□□ -0.5
RFFL-203ENST00000413582 MAP3K10Q02779 954 aa11.95□□□□□ -0.5
RFFL-203ENST00000413582 FAM110CQ1W6H9 321 aa11.95□□□□□ -0.5
RFFL-203ENST00000413582 ATG9AQ7Z3C6 839 aa11.95□□□□□ -0.5
RFFL-203ENST00000413582 NECAB2Q7Z6G3 386 aa11.95□□□□□ -0.5
RFFL-203ENST00000413582 C7orf61Q8IZ16 206 aa11.95□□□□□ -0.5
RFFL-203ENST00000413582 ANKRD13CQ8N6S4 541 aa11.95□□□□□ -0.5
RFFL-203ENST00000413582 TAOK2Q9UL54 1235 aa11.95□□□□□ -0.5
RFFL-203ENST00000413582 ZMYND8Q9ULU4 1186 aaPredicted RBP11.95□□□□□ -0.5
RFFL-203ENST00000413582 AGTPBP1Q9UPW5 1226 aa11.95□□□□□ -0.5
RFFL-203ENST00000413582 UNC80Q8N2C7 3258 aa11.94□□□□□ -0.5
RFFL-203ENST00000413582 DDTLA6NHG4 134 aaPredicted RBP11.94□□□□□ -0.5
RFFL-203ENST00000413582 TREML2Q5T2D2 321 aa11.94□□□□□ -0.5
RFFL-203ENST00000413582 CCDC84Q86UT8 332 aaPredicted RBP11.94□□□□□ -0.5
RFFL-203ENST00000413582 DEFB123Q8N688 67 aa11.94□□□□□ -0.5
RFFL-203ENST00000413582 ANKLE1Q8NAG6 615 aa11.94□□□□□ -0.5
RFFL-203ENST00000413582 COA7Q96BR5 231 aa11.94□□□□□ -0.5
RFFL-203ENST00000413582 USP44Q9H0E7 712 aa11.94□□□□□ -0.5
RFFL-203ENST00000413582 MRS2Q9HD23 443 aa11.94□□□□□ -0.5
RFFL-203ENST00000413582 DDX4Q9NQI0 724 aaKnown RBP11.94□□□□□ -0.5
RFFL-203ENST00000413582 LRRFIP2Q9Y608 721 aaKnown RBP11.94□□□□□ -0.5
RFFL-203ENST00000413582 CTNND1O60716 968 aaKnown RBP11.93□□□□□ -0.5
RFFL-203ENST00000413582 HMGCRP04035 888 aa11.93□□□□□ -0.5
RFFL-203ENST00000413582 PHKA1P46020 1223 aa11.93□□□□□ -0.5
RFFL-203ENST00000413582 ATP2B3Q16720 1220 aa11.93□□□□□ -0.5
RFFL-203ENST00000413582 LRIT3Q3SXY7 679 aa11.93□□□□□ -0.5
RFFL-203ENST00000413582 Q7L0L9 218 aa11.93□□□□□ -0.5
RFFL-203ENST00000413582 MRPL50Q8N5N7 158 aaKnown RBP11.93□□□□□ -0.5
RFFL-203ENST00000413582 PTPRCP08575 1304 aa11.92□□□□□ -0.5
RFFL-203ENST00000413582 SEMA3EO15041 775 aa11.92□□□□□ -0.5
RFFL-203ENST00000413582 MAGEA10P43363 369 aaPredicted RBP11.92□□□□□ -0.5
RFFL-203ENST00000413582 TRIM32Q13049 653 aa11.92□□□□□ -0.5
RFFL-203ENST00000413582 ZSCAN29Q8IWY8 852 aaPredicted RBP11.92□□□□□ -0.5
RFFL-203ENST00000413582 PROCA1Q8NCQ7 364 aaPredicted RBP11.92□□□□□ -0.5
RFFL-203ENST00000413582 GNL3LQ9NVN8 582 aaKnown RBP11.92□□□□□ -0.5
RFFL-203ENST00000413582 PNMA3Q9UL41 463 aa11.92□□□□□ -0.5
RFFL-203ENST00000413582 DENND2AQ9ULE3 1009 aa11.92□□□□□ -0.5
RFFL-203ENST00000413582 STXBP5LQ9Y2K9 1186 aa11.92□□□□□ -0.5
RFFL-203ENST00000413582 CIAO1O76071 339 aa11.91□□□□□ -0.5
RFFL-203ENST00000413582 SYN1P17600 705 aa11.91□□□□□ -0.5
RFFL-203ENST00000413582 PICALMQ13492 652 aa11.91□□□□□ -0.5
RFFL-203ENST00000413582 TDHQ8IZJ6 230 aa11.91□□□□□ -0.5
RFFL-203ENST00000413582 NBPF3Q9H094 633 aa11.91□□□□□ -0.5
RFFL-203ENST00000413582 SIL1Q9H173 461 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms