RNA–Protein interactions for RNA: ENST00000413023.1

HMGN1P34-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 34, humanhuman

BASIC

Gene HMGN1P34, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P34-201ENST00000413023 USP48Q86UV5 1035 aa10.16□□□□□ -0.78
HMGN1P34-201ENST00000413023 DZIP1Q86YF9 867 aaKnown RBP10.16□□□□□ -0.78
HMGN1P34-201ENST00000413023 GPT2Q8TD30 523 aa10.16□□□□□ -0.78
HMGN1P34-201ENST00000413023 DYNLL2Q96FJ2 89 aa10.16□□□□□ -0.78
HMGN1P34-201ENST00000413023 MYL10Q9BUA6 226 aa10.16□□□□□ -0.78
HMGN1P34-201ENST00000413023 CRNKL1Q9BZJ0 848 aaKnown RBP10.16□□□□□ -0.78
HMGN1P34-201ENST00000413023 KRT23Q9C075 422 aa10.16□□□□□ -0.78
HMGN1P34-201ENST00000413023 ZC3H12CQ9C0D7 883 aaKnown RBP10.16□□□□□ -0.78
HMGN1P34-201ENST00000413023 GZF1Q9H116 711 aaPredicted RBP10.16□□□□□ -0.78
HMGN1P34-201ENST00000413023 GDPD2Q9HCC8 539 aa10.16□□□□□ -0.78
HMGN1P34-201ENST00000413023 GJB4Q9NTQ9 266 aa10.16□□□□□ -0.78
HMGN1P34-201ENST00000413023 NAP1L2Q9ULW6 460 aaPredicted RBP10.16□□□□□ -0.78
HMGN1P34-201ENST00000413023 LRRC37AA6NMS7 1700 aa10.16□□□□□ -0.78
HMGN1P34-201ENST00000413023 SNED1Q8TER0 1413 aa10.16□□□□□ -0.78
HMGN1P34-201ENST00000413023 MROH7-TTC4A0A0A0MT08 1334 aa10.15□□□□□ -0.78
HMGN1P34-201ENST00000413023 DDX11L8A8MPP1 907 aa10.15□□□□□ -0.78
HMGN1P34-201ENST00000413023 UBE2Q2LH0YL09 131 aa10.15□□□□□ -0.78
HMGN1P34-201ENST00000413023 IFIT3O14879 490 aaKnown RBP10.15□□□□□ -0.78
HMGN1P34-201ENST00000413023 LIFRP42702 1097 aa10.15□□□□□ -0.78
HMGN1P34-201ENST00000413023 BTDP43251 543 aa10.15□□□□□ -0.78
HMGN1P34-201ENST00000413023 TRDNQ13061 729 aa10.15□□□□□ -0.78
HMGN1P34-201ENST00000413023 NTRK3Q16288 839 aa10.15□□□□□ -0.78
HMGN1P34-201ENST00000413023 SLC4A8Q2Y0W8 1093 aa10.15□□□□□ -0.78
HMGN1P34-201ENST00000413023 TMEM67Q5HYA8 995 aa10.15□□□□□ -0.78
HMGN1P34-201ENST00000413023 OTUD7BQ6GQQ9 843 aa10.15□□□□□ -0.78
HMGN1P34-201ENST00000413023 FERMT3Q86UX7 667 aa10.15□□□□□ -0.78
HMGN1P34-201ENST00000413023 SGMS1Q86VZ5 419 aa10.15□□□□□ -0.78
HMGN1P34-201ENST00000413023 TMEM87BQ96K49 555 aa10.15□□□□□ -0.78
HMGN1P34-201ENST00000413023 DBNDD1Q9H9R9 158 aa10.15□□□□□ -0.78
HMGN1P34-201ENST00000413023 ATP8A2Q9NTI2 1148 aa10.15□□□□□ -0.78
HMGN1P34-201ENST00000413023 ANGEL1Q9UNK9 670 aaKnown RBP10.15□□□□□ -0.78
HMGN1P34-201ENST00000413023 PCDHAC2Q9Y5I4 1007 aa10.15□□□□□ -0.78
HMGN1P34-201ENST00000413023 COL11A2P13942 1736 aaPredicted RBP10.15□□□□□ -0.78
HMGN1P34-201ENST00000413023 GAKO14976 1311 aa10.14□□□□□ -0.79
HMGN1P34-201ENST00000413023 VPS37CA5D8V6 355 aaPredicted RBP10.14□□□□□ -0.79
HMGN1P34-201ENST00000413023 F8W031 263 aaPredicted RBP10.14□□□□□ -0.79
HMGN1P34-201ENST00000413023 C21orf2O43822 256 aa10.14□□□□□ -0.79
HMGN1P34-201ENST00000413023 NMT2O60551 498 aa10.14□□□□□ -0.79
HMGN1P34-201ENST00000413023 IGSF3O75054 1194 aa10.14□□□□□ -0.79
HMGN1P34-201ENST00000413023 LDHCP07864 332 aa10.14□□□□□ -0.79
HMGN1P34-201ENST00000413023 PLCD1P51178 756 aa10.14□□□□□ -0.79
HMGN1P34-201ENST00000413023 FOSBP53539 338 aa10.14□□□□□ -0.79
HMGN1P34-201ENST00000413023 GSTO1P78417 241 aa10.14□□□□□ -0.79
HMGN1P34-201ENST00000413023 DNM1Q05193 864 aaKnown RBP10.14□□□□□ -0.79
HMGN1P34-201ENST00000413023 RESTQ13127 1097 aa10.14□□□□□ -0.79
HMGN1P34-201ENST00000413023 TMED8Q6PL24 325 aaPredicted RBP10.14□□□□□ -0.79
HMGN1P34-201ENST00000413023 APOA5Q6Q788 366 aa10.14□□□□□ -0.79
HMGN1P34-201ENST00000413023 ILDR1Q86SU0 546 aaPredicted RBP10.14□□□□□ -0.79
HMGN1P34-201ENST00000413023 TGFBRAP1Q8WUH2 860 aa10.14□□□□□ -0.79
HMGN1P34-201ENST00000413023 CNKSR1Q969H4 720 aa10.14□□□□□ -0.79
HMGN1P34-201ENST00000413023 AIFM3Q96NN9 605 aa10.14□□□□□ -0.79
HMGN1P34-201ENST00000413023 CNNM2Q9H8M5 875 aa10.14□□□□□ -0.79
HMGN1P34-201ENST00000413023 TFIP11Q9UBB9 837 aaKnown RBP10.14□□□□□ -0.79
HMGN1P34-201ENST00000413023 ATF5Q9Y2D1 282 aaPredicted RBP10.14□□□□□ -0.79
HMGN1P34-201ENST00000413023 SLX4Q8IY92 1834 aa10.14□□□□□ -0.79
HMGN1P34-201ENST00000413023 GOLGA8BA8MQT2 603 aa10.13□□□□□ -0.79
HMGN1P34-201ENST00000413023 ORC4O43929 436 aa10.13□□□□□ -0.79
HMGN1P34-201ENST00000413023 RANBP6O60518 1105 aaKnown RBP10.13□□□□□ -0.79
HMGN1P34-201ENST00000413023 ZBTB7AO95365 584 aa10.13□□□□□ -0.79
HMGN1P34-201ENST00000413023 SCNN1DP51172 638 aa10.13□□□□□ -0.79
HMGN1P34-201ENST00000413023 GUCY1B3Q02153 619 aa10.13□□□□□ -0.79
HMGN1P34-201ENST00000413023 FAM47AQ5JRC9 791 aa10.13□□□□□ -0.79
HMGN1P34-201ENST00000413023 GAS2L3Q86XJ1 694 aa10.13□□□□□ -0.79
HMGN1P34-201ENST00000413023 MAPKAPK5Q8IW41 473 aa10.13□□□□□ -0.79
HMGN1P34-201ENST00000413023 CCDC144CPQ8IYA2 1237 aa10.13□□□□□ -0.79
HMGN1P34-201ENST00000413023 TMEM87AQ8NBN3 555 aa10.13□□□□□ -0.79
HMGN1P34-201ENST00000413023 SLC16A10Q8TF71 515 aa10.13□□□□□ -0.79
HMGN1P34-201ENST00000413023 TOMM22Q9NS69 142 aa10.13□□□□□ -0.79
HMGN1P34-201ENST00000413023 MCM9Q9NXL9 1143 aa10.13□□□□□ -0.79
HMGN1P34-201ENST00000413023 RBM27Q9P2N5 1060 aaKnown RBP10.13□□□□□ -0.79
HMGN1P34-201ENST00000413023 SAP30BPQ9UHR5 308 aaKnown RBP10.13□□□□□ -0.79
HMGN1P34-201ENST00000413023 DAGLAQ9Y4D2 1042 aa10.13□□□□□ -0.79
HMGN1P34-201ENST00000413023 CHD4Q14839 1912 aa10.12□□□□□ -0.79
HMGN1P34-201ENST00000413023 YDJCA8MPS7 323 aa10.12□□□□□ -0.79
HMGN1P34-201ENST00000413023 BAG3O95817 575 aa10.12□□□□□ -0.79
HMGN1P34-201ENST00000413023 AOC3Q16853 763 aa10.12□□□□□ -0.79
HMGN1P34-201ENST00000413023 KLHL40Q2TBA0 621 aa10.12□□□□□ -0.79
HMGN1P34-201ENST00000413023 SKOR2Q2VWA4 1001 aaPredicted RBP10.12□□□□□ -0.79
HMGN1P34-201ENST00000413023 DACT2Q5SW24 774 aa10.12□□□□□ -0.79
HMGN1P34-201ENST00000413023 RCSD1Q6JBY9 416 aa10.12□□□□□ -0.79
HMGN1P34-201ENST00000413023 APOBEC3HQ6NTF7 200 aaKnown RBP10.12□□□□□ -0.79
HMGN1P34-201ENST00000413023 POTEHQ6S545 545 aa10.12□□□□□ -0.79
HMGN1P34-201ENST00000413023 PODNQ7Z5L7 613 aa10.12□□□□□ -0.79
HMGN1P34-201ENST00000413023 ENAHQ8N8S7 591 aaPredicted RBP10.12□□□□□ -0.79
HMGN1P34-201ENST00000413023 SLC44A5Q8NCS7 719 aa10.12□□□□□ -0.79
HMGN1P34-201ENST00000413023 TBC1D22AQ8WUA7 517 aa10.12□□□□□ -0.79
HMGN1P34-201ENST00000413023 FBXW7Q969H0 707 aa10.12□□□□□ -0.79
HMGN1P34-201ENST00000413023 ZSCAN10Q96SZ4 725 aaPredicted RBP10.12□□□□□ -0.79
HMGN1P34-201ENST00000413023 RNF41Q9H4P4 317 aaPredicted RBP10.12□□□□□ -0.79
HMGN1P34-201ENST00000413023 DDX4Q9NQI0 724 aaKnown RBP10.12□□□□□ -0.79
HMGN1P34-201ENST00000413023 IL17RBQ9NRM6 502 aa10.12□□□□□ -0.79
HMGN1P34-201ENST00000413023 DDX49Q9Y6V7 483 aaKnown RBP10.12□□□□□ -0.79
HMGN1P34-201ENST00000413023 C10orf71Q711Q0 1435 aa10.12□□□□□ -0.79
HMGN1P34-201ENST00000413023 TIAM2Q8IVF5 1701 aa10.12□□□□□ -0.79
HMGN1P34-201ENST00000413023 MYH13Q9UKX3 1938 aa10.11□□□□□ -0.79
HMGN1P34-201ENST00000413023 ZBTB43O43298 467 aa10.11□□□□□ -0.79
HMGN1P34-201ENST00000413023 ECE2O60344 883 aa10.11□□□□□ -0.79
HMGN1P34-201ENST00000413023 SLURP2P0DP57 97 aa10.11□□□□□ -0.79
HMGN1P34-201ENST00000413023 PDCP20941 246 aa10.11□□□□□ -0.79
HMGN1P34-201ENST00000413023 GUCY1A2P33402 732 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms