RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 CBX8Q9HC52 389 aa9.58□□□□□ -0.88
PBRM1-209ENST00000412587 CCDC87Q9NVE4 849 aa9.58□□□□□ -0.88
PBRM1-209ENST00000412587 SPATA31E1Q6ZUB1 1445 aa9.57□□□□□ -0.88
PBRM1-209ENST00000412587 SEC31AO94979 1220 aaKnown RBP9.57□□□□□ -0.88
PBRM1-209ENST00000412587 MAGEB6P1A0A0J9YX57 407 aa9.57□□□□□ -0.88
PBRM1-209ENST00000412587 TULP2O00295 520 aa9.57□□□□□ -0.88
PBRM1-209ENST00000412587 UBASH3AP57075 661 aa9.57□□□□□ -0.88
PBRM1-209ENST00000412587 EIF4A1P60842 406 aaKnown RBP9.57□□□□□ -0.88
PBRM1-209ENST00000412587 SLMAPQ14BN4 828 aa9.57□□□□□ -0.88
PBRM1-209ENST00000412587 CCDC178Q5BJE1 867 aa9.57□□□□□ -0.88
PBRM1-209ENST00000412587 PLEKHM2Q8IWE5 1019 aa9.57□□□□□ -0.88
PBRM1-209ENST00000412587 SMARCC2Q8TAQ2 1214 aa9.57□□□□□ -0.88
PBRM1-209ENST00000412587 EYA3Q99504 573 aa9.57□□□□□ -0.88
PBRM1-209ENST00000412587 EHMT1Q9H9B1 1298 aa9.57□□□□□ -0.88
PBRM1-209ENST00000412587 ANAPC4Q9UJX5 808 aa9.57□□□□□ -0.88
PBRM1-209ENST00000412587 ERVV-2B6SEH9 535 aa9.57□□□□□ -0.88
PBRM1-209ENST00000412587 PFDN1O60925 122 aa9.57□□□□□ -0.88
PBRM1-209ENST00000412587 ATP11AP98196 1134 aa9.57□□□□□ -0.88
PBRM1-209ENST00000412587 CPLX4Q7Z7G2 160 aa9.57□□□□□ -0.88
PBRM1-209ENST00000412587 NECAB1Q8N987 351 aa9.57□□□□□ -0.88
PBRM1-209ENST00000412587 EHBP1Q8NDI1 1231 aa9.57□□□□□ -0.88
PBRM1-209ENST00000412587 FAM204AQ9H8W3 233 aa9.57□□□□□ -0.88
PBRM1-209ENST00000412587 UGGT1Q9NYU2 1555 aa9.56□□□□□ -0.88
PBRM1-209ENST00000412587 LONRF2Q1L5Z9 754 aa9.56□□□□□ -0.88
PBRM1-209ENST00000412587 TSNAXIP1Q2TAA8 658 aa9.56□□□□□ -0.88
PBRM1-209ENST00000412587 LRRC8AQ8IWT6 810 aa9.56□□□□□ -0.88
PBRM1-209ENST00000412587 AOPEPQ8N6M6 819 aa9.56□□□□□ -0.88
PBRM1-209ENST00000412587 FSIP1Q8NA03 581 aa9.56□□□□□ -0.88
PBRM1-209ENST00000412587 CHCHD3Q9NX63 227 aaKnown RBP9.56□□□□□ -0.88
PBRM1-209ENST00000412587 STK32BQ9NY57 414 aa9.56□□□□□ -0.88
PBRM1-209ENST00000412587 WWC3Q9ULE0 1092 aa9.56□□□□□ -0.88
PBRM1-209ENST00000412587 INSRP06213 1382 aa9.56□□□□□ -0.88
PBRM1-209ENST00000412587 CEP104O60308 925 aa9.56□□□□□ -0.88
PBRM1-209ENST00000412587 PLCG2P16885 1265 aa9.56□□□□□ -0.88
PBRM1-209ENST00000412587 GNAT2P19087 354 aa9.56□□□□□ -0.88
PBRM1-209ENST00000412587 ITGA6P23229 1130 aa9.56□□□□□ -0.88
PBRM1-209ENST00000412587 TIMM10P62072 90 aa9.56□□□□□ -0.88
PBRM1-209ENST00000412587 PICALMQ13492 652 aa9.56□□□□□ -0.88
PBRM1-209ENST00000412587 IFIT1BQ5T764 474 aaKnown RBP9.56□□□□□ -0.88
PBRM1-209ENST00000412587 ARMCX6Q7L4S7 300 aa9.56□□□□□ -0.88
PBRM1-209ENST00000412587 TSC22D3Q99576 134 aa9.56□□□□□ -0.88
PBRM1-209ENST00000412587 NAA15Q9BXJ9 866 aaKnown RBP9.56□□□□□ -0.88
PBRM1-209ENST00000412587 CAPS2Q9BXY5 557 aa9.56□□□□□ -0.88
PBRM1-209ENST00000412587 PSD3Q9NYI0 1048 aa9.56□□□□□ -0.88
PBRM1-209ENST00000412587 CCDC151A5D8V7 595 aa9.56□□□□□ -0.88
PBRM1-209ENST00000412587 CREB3O43889 395 aa9.56□□□□□ -0.88
PBRM1-209ENST00000412587 PDE8AO60658 829 aa9.56□□□□□ -0.88
PBRM1-209ENST00000412587 DNM1Q05193 864 aaKnown RBP9.56□□□□□ -0.88
PBRM1-209ENST00000412587 KLHL10Q6JEL2 608 aa9.56□□□□□ -0.88
PBRM1-209ENST00000412587 DDX27Q96GQ7 796 aaKnown RBP9.56□□□□□ -0.88
PBRM1-209ENST00000412587 ZMAT2Q96NC0 199 aaKnown RBP9.56□□□□□ -0.88
PBRM1-209ENST00000412587 NLRP1Q9C000 1473 aa9.56□□□□□ -0.88
PBRM1-209ENST00000412587 GNGT1P63211 74 aa9.56□□□□□ -0.88
PBRM1-209ENST00000412587 SUGP1Q8IWZ8 645 aaKnown RBP9.56□□□□□ -0.88
PBRM1-209ENST00000412587 JDP2Q8WYK2 163 aa9.56□□□□□ -0.88
PBRM1-209ENST00000412587 FAN1Q9Y2M0 1017 aa9.56□□□□□ -0.88
PBRM1-209ENST00000412587 ERVK-7P63135 1459 aa9.56□□□□□ -0.88
PBRM1-209ENST00000412587 PREX2Q70Z35 1606 aa9.56□□□□□ -0.88
PBRM1-209ENST00000412587 TSPOAP1O95153 1857 aa9.55□□□□□ -0.88
PBRM1-209ENST00000412587 ERCC6L2Q5T890 1561 aa9.55□□□□□ -0.88
PBRM1-209ENST00000412587 PSDA5PKW4 1024 aaPredicted RBP9.55□□□□□ -0.88
PBRM1-209ENST00000412587 RIMBP2O15034 1052 aa9.55□□□□□ -0.88
PBRM1-209ENST00000412587 GADD45BO75293 160 aaPredicted RBP9.55□□□□□ -0.88
PBRM1-209ENST00000412587 BRD1O95696 1058 aa9.55□□□□□ -0.88
PBRM1-209ENST00000412587 MATR3P43243 847 aaKnown RBP eCLIP9.55□□□□□ -0.88
PBRM1-209ENST00000412587 GNAQP50148 359 aa9.55□□□□□ -0.88
PBRM1-209ENST00000412587 RTN1Q16799 776 aa9.55□□□□□ -0.88
PBRM1-209ENST00000412587 MAGEB6Q8N7X4 407 aa9.55□□□□□ -0.88
PBRM1-209ENST00000412587 MIGA1Q8NAN2 632 aa9.55□□□□□ -0.88
PBRM1-209ENST00000412587 IL17REQ8NFR9 667 aa9.55□□□□□ -0.88
PBRM1-209ENST00000412587 WHAMMQ8TF30 809 aa9.55□□□□□ -0.88
PBRM1-209ENST00000412587 TCP11L1Q9NUJ3 509 aa9.55□□□□□ -0.88
PBRM1-209ENST00000412587 GOLGA6BA6NDN3 693 aa9.55□□□□□ -0.88
PBRM1-209ENST00000412587 PPP1R12BO60237 982 aaPredicted RBP9.55□□□□□ -0.88
PBRM1-209ENST00000412587 LDHBP07195 334 aaKnown RBP9.55□□□□□ -0.88
PBRM1-209ENST00000412587 PHKG2P15735 406 aa9.55□□□□□ -0.88
PBRM1-209ENST00000412587 CRYMQ14894 314 aa9.55□□□□□ -0.88
PBRM1-209ENST00000412587 CCDC40Q4G0X9 1142 aa9.55□□□□□ -0.88
PBRM1-209ENST00000412587 TMED8Q6PL24 325 aaPredicted RBP9.55□□□□□ -0.88
PBRM1-209ENST00000412587 PNMA8AQ86V59 439 aaPredicted RBP9.55□□□□□ -0.88
PBRM1-209ENST00000412587 SPDL1Q96EA4 605 aa9.55□□□□□ -0.88
PBRM1-209ENST00000412587 IFT74Q96LB3 600 aa9.55□□□□□ -0.88
PBRM1-209ENST00000412587 HECW2Q9P2P5 1572 aa9.55□□□□□ -0.88
PBRM1-209ENST00000412587 GCKRQ14397 625 aa9.55□□□□□ -0.88
PBRM1-209ENST00000412587 RBM17Q96I25 401 aaKnown RBP9.55□□□□□ -0.88
PBRM1-209ENST00000412587 RABEP2Q9H5N1 569 aa9.55□□□□□ -0.88
PBRM1-209ENST00000412587 ST7Q9NRC1 585 aa9.55□□□□□ -0.88
PBRM1-209ENST00000412587 MCM9Q9NXL9 1143 aa9.55□□□□□ -0.88
PBRM1-209ENST00000412587 ROBO2Q9HCK4 1378 aa9.55□□□□□ -0.88
PBRM1-209ENST00000412587 PRC1O43663 620 aa9.55□□□□□ -0.88
PBRM1-209ENST00000412587 NBPF7P0C2Y1 421 aaPredicted RBP9.55□□□□□ -0.88
PBRM1-209ENST00000412587 DESP17661 470 aa9.55□□□□□ -0.88
PBRM1-209ENST00000412587 UBA7P41226 1012 aa9.55□□□□□ -0.88
PBRM1-209ENST00000412587 CORO7P57737 925 aa9.55□□□□□ -0.88
PBRM1-209ENST00000412587 E2F5Q15329 346 aa9.55□□□□□ -0.88
PBRM1-209ENST00000412587 NAIF1Q69YI7 327 aaPredicted RBP9.55□□□□□ -0.88
PBRM1-209ENST00000412587 CLEC17AQ6ZS10 378 aa9.55□□□□□ -0.88
PBRM1-209ENST00000412587 BATF3Q9NR55 127 aa9.55□□□□□ -0.88
PBRM1-209ENST00000412587 ANKRD65E5RJM6 399 aa9.54□□□□□ -0.88
PBRM1-209ENST00000412587 CCDC92Q53HC0 331 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms