RNA–Protein interactions for RNA: ENST00000411938.1

LSM8-202, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM8, Length 290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-202ENST00000411938 A0A0G2JLL6 359 aaPredicted RBP8.76□□□□□ -1.01
LSM8-202ENST00000411938 COL6A1P12109 1028 aa8.76□□□□□ -1.01
LSM8-202ENST00000411938 CASP7P55210 303 aa8.76□□□□□ -1.01
LSM8-202ENST00000411938 UBE4AQ14139 1066 aa8.76□□□□□ -1.01
LSM8-202ENST00000411938 CCDC57Q2TAC2 916 aa8.76□□□□□ -1.01
LSM8-202ENST00000411938 PRRT2Q7Z6L0 340 aaPredicted RBP8.76□□□□□ -1.01
LSM8-202ENST00000411938 FAM151AQ8WW52 585 aa8.76□□□□□ -1.01
LSM8-202ENST00000411938 RUNDC1Q96C34 613 aa8.76□□□□□ -1.01
LSM8-202ENST00000411938 STK31Q9BXU1 1019 aa8.76□□□□□ -1.01
LSM8-202ENST00000411938 SLC45A1Q9Y2W3 748 aa8.76□□□□□ -1.01
LSM8-202ENST00000411938 ZBED9Q6R2W3 1325 aa8.76□□□□□ -1.01
LSM8-202ENST00000411938 ZNF853P0CG23 659 aa8.75□□□□□ -1.01
LSM8-202ENST00000411938 PRKAR2AP13861 404 aaKnown RBP8.75□□□□□ -1.01
LSM8-202ENST00000411938 HOXD11P31277 338 aaPredicted RBP8.75□□□□□ -1.01
LSM8-202ENST00000411938 GNAI1P63096 354 aa8.75□□□□□ -1.01
LSM8-202ENST00000411938 MAP3K12Q12852 859 aa8.75□□□□□ -1.01
LSM8-202ENST00000411938 SHHQ15465 462 aa8.75□□□□□ -1.01
LSM8-202ENST00000411938 FAM110CQ1W6H9 321 aa8.75□□□□□ -1.01
LSM8-202ENST00000411938 MRIQ9BWK5 157 aa8.75□□□□□ -1.01
LSM8-202ENST00000411938 TTYH1Q9H313 450 aaPredicted RBP8.75□□□□□ -1.01
LSM8-202ENST00000411938 IFT57Q9NWB7 429 aa8.75□□□□□ -1.01
LSM8-202ENST00000411938 PRKAG2Q9UGJ0 569 aa8.75□□□□□ -1.01
LSM8-202ENST00000411938 GJD2Q9UKL4 321 aa8.75□□□□□ -1.01
LSM8-202ENST00000411938 AK9Q5TCS8 1911 aa8.75□□□□□ -1.01
LSM8-202ENST00000411938 LAMA2P24043 3122 aaKnown RBP8.75□□□□□ -1.01
LSM8-202ENST00000411938 MAST3O60307 1309 aa8.75□□□□□ -1.01
LSM8-202ENST00000411938 MYO9BQ13459 2157 aa8.74□□□□□ -1.01
LSM8-202ENST00000411938 TRIM75PA6NK02 468 aa8.74□□□□□ -1.01
LSM8-202ENST00000411938 PTPRAP18433 802 aa8.74□□□□□ -1.01
LSM8-202ENST00000411938 CYP2B6P20813 491 aa8.74□□□□□ -1.01
LSM8-202ENST00000411938 FOXO4P98177 505 aa8.74□□□□□ -1.01
LSM8-202ENST00000411938 HHIPL2Q6UWX4 724 aa8.74□□□□□ -1.01
LSM8-202ENST00000411938 LMBR1LQ6UX01 489 aa8.74□□□□□ -1.01
LSM8-202ENST00000411938 SCYL3Q8IZE3 742 aa8.74□□□□□ -1.01
LSM8-202ENST00000411938 LINS1Q8NG48 757 aa8.74□□□□□ -1.01
LSM8-202ENST00000411938 TRIB2Q92519 343 aa8.74□□□□□ -1.01
LSM8-202ENST00000411938 PNMA3Q9UL41 463 aa8.74□□□□□ -1.01
LSM8-202ENST00000411938 AGTPBP1Q9UPW5 1226 aa8.74□□□□□ -1.01
LSM8-202ENST00000411938 AFG3L2Q9Y4W6 797 aa8.74□□□□□ -1.01
LSM8-202ENST00000411938 EYSQ5T1H1 3165 aa8.73□□□□□ -1.01
LSM8-202ENST00000411938 GCLCP48506 637 aaPredicted RBP8.73□□□□□ -1.01
LSM8-202ENST00000411938 CALD1Q05682 793 aaKnown RBP8.73□□□□□ -1.01
LSM8-202ENST00000411938 NFIAQ12857 509 aa8.73□□□□□ -1.01
LSM8-202ENST00000411938 WDR43Q15061 677 aaKnown RBP eCLIP8.73□□□□□ -1.01
LSM8-202ENST00000411938 CAVIN4Q5BKX8 364 aa8.73□□□□□ -1.01
LSM8-202ENST00000411938 C9orf50Q5SZB4 431 aa8.73□□□□□ -1.01
LSM8-202ENST00000411938 MAP3K21Q5TCX8 1036 aa8.73□□□□□ -1.01
LSM8-202ENST00000411938 ERICH6BQ5W0A0 696 aa8.73□□□□□ -1.01
LSM8-202ENST00000411938 G2E3Q7L622 706 aa8.73□□□□□ -1.01
LSM8-202ENST00000411938 FBXO33Q7Z6M2 555 aa8.73□□□□□ -1.01
LSM8-202ENST00000411938 TSPYL6Q8N831 410 aa8.73□□□□□ -1.01
LSM8-202ENST00000411938 USP38Q8NB14 1042 aa8.73□□□□□ -1.01
LSM8-202ENST00000411938 SENP6Q9GZR1 1112 aaPredicted RBP8.73□□□□□ -1.01
LSM8-202ENST00000411938 MRS2Q9HD23 443 aa8.73□□□□□ -1.01
LSM8-202ENST00000411938 LRRFIP2Q9Y608 721 aaKnown RBP8.73□□□□□ -1.01
LSM8-202ENST00000411938 MUC6Q6W4X9 2439 aa8.72□□□□□ -1.01
LSM8-202ENST00000411938 A0A1B0GUL6 1792 aa8.72□□□□□ -1.01
LSM8-202ENST00000411938 PHF20L1A8MW92 1017 aa8.72□□□□□ -1.01
LSM8-202ENST00000411938 SLC4A2P04920 1241 aa8.72□□□□□ -1.01
LSM8-202ENST00000411938 ZKSCAN1P17029 563 aaPredicted RBP8.72□□□□□ -1.01
LSM8-202ENST00000411938 ATN1P54259 1190 aaPredicted RBP8.72□□□□□ -1.01
LSM8-202ENST00000411938 SMAD3P84022 425 aaKnown RBP8.72□□□□□ -1.01
LSM8-202ENST00000411938 TREML2Q5T2D2 321 aa8.72□□□□□ -1.01
LSM8-202ENST00000411938 CDC42EP5Q6NZY7 148 aa8.72□□□□□ -1.01
LSM8-202ENST00000411938 DNAAF4Q8WXU2 420 aa8.72□□□□□ -1.01
LSM8-202ENST00000411938 SUGT1Q9Y2Z0 365 aa8.72□□□□□ -1.01
LSM8-202ENST00000411938 CCND3P30281 292 aaPredicted RBP8.71□□□□□ -1.02
LSM8-202ENST00000411938 CACNB2Q08289 660 aaPredicted RBP8.71□□□□□ -1.02
LSM8-202ENST00000411938 FKBP5Q13451 457 aaPredicted RBP8.71□□□□□ -1.02
LSM8-202ENST00000411938 EPHA10Q5JZY3 1008 aa8.71□□□□□ -1.02
LSM8-202ENST00000411938 LHX8Q68G74 356 aa8.71□□□□□ -1.02
LSM8-202ENST00000411938 CCDC84Q86UT8 332 aaPredicted RBP8.71□□□□□ -1.02
LSM8-202ENST00000411938 ZSCAN29Q8IWY8 852 aaPredicted RBP8.71□□□□□ -1.02
LSM8-202ENST00000411938 ZFPM1Q8IX07 1006 aa8.71□□□□□ -1.02
LSM8-202ENST00000411938 ADAMTS19Q8TE59 1207 aa8.71□□□□□ -1.02
LSM8-202ENST00000411938 PPM1EQ8WY54 764 aa8.71□□□□□ -1.02
LSM8-202ENST00000411938 NUDT12Q9BQG2 462 aa8.71□□□□□ -1.02
LSM8-202ENST00000411938 PUS3Q9BZE2 481 aaKnown RBP8.71□□□□□ -1.02
LSM8-202ENST00000411938 USP40Q9NVE5 1235 aa8.71□□□□□ -1.02
LSM8-202ENST00000411938 FAM198AQ9UFP1 575 aa8.71□□□□□ -1.02
LSM8-202ENST00000411938 DAGLAQ9Y4D2 1042 aa8.71□□□□□ -1.02
LSM8-202ENST00000411938 CTNND1O60716 968 aaKnown RBP8.7□□□□□ -1.02
LSM8-202ENST00000411938 XRCC5P13010 732 aaKnown RBP8.7□□□□□ -1.02
LSM8-202ENST00000411938 FLIIQ13045 1269 aa8.7□□□□□ -1.02
LSM8-202ENST00000411938 PDE3AQ14432 1141 aa8.7□□□□□ -1.02
LSM8-202ENST00000411938 DIXDC1Q155Q3 683 aa8.7□□□□□ -1.02
LSM8-202ENST00000411938 CCDC184Q52MB2 194 aa8.7□□□□□ -1.02
LSM8-202ENST00000411938 TRMT44Q8IYL2 757 aaKnown RBP8.7□□□□□ -1.02
LSM8-202ENST00000411938 IL27Q8NEV9 243 aa8.7□□□□□ -1.02
LSM8-202ENST00000411938 ATXN2LQ8WWM7 1075 aaKnown RBP8.7□□□□□ -1.02
LSM8-202ENST00000411938 UHRF1Q96T88 793 aaPredicted RBP8.7□□□□□ -1.02
LSM8-202ENST00000411938 PRDM5Q9NQX1 630 aaPredicted RBP8.7□□□□□ -1.02
LSM8-202ENST00000411938 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.7□□□□□ -1.02
LSM8-202ENST00000411938 ADAMTS8Q9UP79 889 aa8.7□□□□□ -1.02
LSM8-202ENST00000411938 ATP11BQ9Y2G3 1177 aa8.7□□□□□ -1.02
LSM8-202ENST00000411938 MUC3AQ02505 3323 aa8.7□□□□□ -1.02
LSM8-202ENST00000411938 RTP1P59025 263 aa8.69□□□□□ -1.02
LSM8-202ENST00000411938 SPP2Q13103 211 aa8.69□□□□□ -1.02
LSM8-202ENST00000411938 PABPC4Q13310 644 aaKnown RBP eCLIP8.69□□□□□ -1.02
LSM8-202ENST00000411938 GRIN2CQ14957 1233 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms