RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 MFAP1P55081 439 aaKnown RBP4.35□□□□□ -1.71
RNU6-1140P-201ENST00000410517 FKBP5Q13451 457 aaPredicted RBP4.35□□□□□ -1.71
RNU6-1140P-201ENST00000410517 PDE12Q6L8Q7 609 aaKnown RBP4.35□□□□□ -1.71
RNU6-1140P-201ENST00000410517 ALKBH2Q6NS38 261 aa4.35□□□□□ -1.71
RNU6-1140P-201ENST00000410517 CYFIP1Q7L576 1253 aa4.35□□□□□ -1.71
RNU6-1140P-201ENST00000410517 TXNDC2Q86VQ3 553 aa4.35□□□□□ -1.71
RNU6-1140P-201ENST00000410517 BORCS6Q96GS4 357 aa4.35□□□□□ -1.71
RNU6-1140P-201ENST00000410517 GSX1Q9H4S2 264 aaPredicted RBP4.35□□□□□ -1.71
RNU6-1140P-201ENST00000410517 MKNK2Q9HBH9 465 aa4.35□□□□□ -1.71
RNU6-1140P-201ENST00000410517 BIN2Q9UBW5 565 aaPredicted RBP4.35□□□□□ -1.71
RNU6-1140P-201ENST00000410517 EIF4EBP3O60516 100 aaPredicted RBP4.34□□□□□ -1.71
RNU6-1140P-201ENST00000410517 FAM13AO94988 1023 aa4.34□□□□□ -1.71
RNU6-1140P-201ENST00000410517 ABL1P00519 1130 aa4.34□□□□□ -1.71
RNU6-1140P-201ENST00000410517 PCSK2P16519 638 aa4.34□□□□□ -1.71
RNU6-1140P-201ENST00000410517 NFKB2Q00653 900 aa4.34□□□□□ -1.71
RNU6-1140P-201ENST00000410517 POU4F3Q15319 338 aa4.34□□□□□ -1.71
RNU6-1140P-201ENST00000410517 HP1BP3Q5SSJ5 553 aaPredicted RBP4.34□□□□□ -1.71
RNU6-1140P-201ENST00000410517 ZSCAN29Q8IWY8 852 aaPredicted RBP4.34□□□□□ -1.71
RNU6-1140P-201ENST00000410517 TTC16Q8NEE8 873 aa4.34□□□□□ -1.71
RNU6-1140P-201ENST00000410517 KCNN1Q92952 543 aa4.34□□□□□ -1.71
RNU6-1140P-201ENST00000410517 NRSN2Q9GZP1 204 aa4.34□□□□□ -1.71
RNU6-1140P-201ENST00000410517 EPB41L4BQ9H329 900 aa4.34□□□□□ -1.71
RNU6-1140P-201ENST00000410517 CNTNAP4Q9C0A0 1308 aa4.34□□□□□ -1.71
RNU6-1140P-201ENST00000410517 RB1CC1Q8TDY2 1594 aa4.33□□□□□ -1.72
RNU6-1140P-201ENST00000410517 H3BRB1 525 aa4.33□□□□□ -1.72
RNU6-1140P-201ENST00000410517 TNFRSF10BO14763 440 aa4.33□□□□□ -1.72
RNU6-1140P-201ENST00000410517 NDUFB5O43674 189 aa4.33□□□□□ -1.72
RNU6-1140P-201ENST00000410517 LEFTY1O75610 366 aa4.33□□□□□ -1.72
RNU6-1140P-201ENST00000410517 CYP11A1P05108 521 aa4.33□□□□□ -1.72
RNU6-1140P-201ENST00000410517 RPLP1P05386 114 aaKnown RBP4.33□□□□□ -1.72
RNU6-1140P-201ENST00000410517 GLDCP23378 1020 aa4.33□□□□□ -1.72
RNU6-1140P-201ENST00000410517 SKOR2Q2VWA4 1001 aaPredicted RBP4.33□□□□□ -1.72
RNU6-1140P-201ENST00000410517 ASB11Q8WXH4 323 aa4.33□□□□□ -1.72
RNU6-1140P-201ENST00000410517 ZKSCAN3Q9BRR0 538 aa4.33□□□□□ -1.72
RNU6-1140P-201ENST00000410517 TUT1Q9H6E5 874 aaKnown RBP4.33□□□□□ -1.72
RNU6-1140P-201ENST00000410517 AMOTL2Q9Y2J4 779 aa4.33□□□□□ -1.72
RNU6-1140P-201ENST00000410517 SNX11Q9Y5W9 270 aa4.33□□□□□ -1.72
RNU6-1140P-201ENST00000410517 SOWAHDA6NJG2 315 aa4.32□□□□□ -1.72
RNU6-1140P-201ENST00000410517 SUV39H1O43463 412 aa4.32□□□□□ -1.72
RNU6-1140P-201ENST00000410517 ADRB1P08588 477 aa4.32□□□□□ -1.72
RNU6-1140P-201ENST00000410517 FKBP4Q02790 459 aaKnown RBP eCLIP4.32□□□□□ -1.72
RNU6-1140P-201ENST00000410517 FAM69CQ0P6D2 419 aa4.32□□□□□ -1.72
RNU6-1140P-201ENST00000410517 HELQQ8TDG4 1101 aa4.32□□□□□ -1.72
RNU6-1140P-201ENST00000410517 PRIMPOLQ96LW4 560 aa4.32□□□□□ -1.72
RNU6-1140P-201ENST00000410517 ZBTB39O15060 712 aa4.31□□□□□ -1.72
RNU6-1140P-201ENST00000410517 IGHA2P01877 340 aa4.31□□□□□ -1.72
RNU6-1140P-201ENST00000410517 NEFLP07196 543 aa4.31□□□□□ -1.72
RNU6-1140P-201ENST00000410517 USP5P45974 858 aa4.31□□□□□ -1.72
RNU6-1140P-201ENST00000410517 PDE3BQ13370 1112 aa4.31□□□□□ -1.72
RNU6-1140P-201ENST00000410517 AAMPQ13685 434 aa4.31□□□□□ -1.72
RNU6-1140P-201ENST00000410517 OCLNQ16625 522 aa4.31□□□□□ -1.72
RNU6-1140P-201ENST00000410517 CXorf38Q8TB03 319 aa4.31□□□□□ -1.72
RNU6-1140P-201ENST00000410517 PMEPA1Q969W9 287 aa4.31□□□□□ -1.72
RNU6-1140P-201ENST00000410517 NUDT16Q96DE0 195 aaKnown RBP4.31□□□□□ -1.72
RNU6-1140P-201ENST00000410517 MKNK1Q9BUB5 465 aa4.31□□□□□ -1.72
RNU6-1140P-201ENST00000410517 TNKS2Q9H2K2 1166 aa4.31□□□□□ -1.72
RNU6-1140P-201ENST00000410517 PIDD1Q9HB75 910 aa4.31□□□□□ -1.72
RNU6-1140P-201ENST00000410517 ZFYVE1Q9HBF4 777 aa4.31□□□□□ -1.72
RNU6-1140P-201ENST00000410517 PPP1R9AQ9ULJ8 1098 aa4.31□□□□□ -1.72
RNU6-1140P-201ENST00000410517 ICMTO60725 284 aa4.3□□□□□ -1.72
RNU6-1140P-201ENST00000410517 AOC2O75106 756 aa4.3□□□□□ -1.72
RNU6-1140P-201ENST00000410517 CELA3BP08861 270 aa4.3□□□□□ -1.72
RNU6-1140P-201ENST00000410517 ZXDCQ2QGD7 858 aaPredicted RBP4.3□□□□□ -1.72
RNU6-1140P-201ENST00000410517 NPM2Q86SE8 214 aaKnown RBP4.3□□□□□ -1.72
RNU6-1140P-201ENST00000410517 KCNC2Q96PR1 638 aa4.3□□□□□ -1.72
RNU6-1140P-201ENST00000410517 CITED4Q96RK1 184 aa4.3□□□□□ -1.72
RNU6-1140P-201ENST00000410517 CORO1BQ9BR76 489 aa4.3□□□□□ -1.72
RNU6-1140P-201ENST00000410517 DUSP23Q9BVJ7 150 aa4.3□□□□□ -1.72
RNU6-1140P-201ENST00000410517 RTEL1Q9NZ71 1219 aa4.3□□□□□ -1.72
RNU6-1140P-201ENST00000410517 DCTN4Q9UJW0 460 aa4.3□□□□□ -1.72
RNU6-1140P-201ENST00000410517 ECEL1O95672 775 aa4.29□□□□□ -1.72
RNU6-1140P-201ENST00000410517 MAPK1P28482 360 aa4.29□□□□□ -1.72
RNU6-1140P-201ENST00000410517 SERPINB4P48594 390 aa4.29□□□□□ -1.72
RNU6-1140P-201ENST00000410517 EHHADHQ08426 723 aa4.29□□□□□ -1.72
RNU6-1140P-201ENST00000410517 NAA30Q147X3 362 aaPredicted RBP4.29□□□□□ -1.72
RNU6-1140P-201ENST00000410517 ZNF326Q5BKZ1 582 aaKnown RBP4.29□□□□□ -1.72
RNU6-1140P-201ENST00000410517 GTF3C2Q8WUA4 911 aaPredicted RBP4.29□□□□□ -1.72
RNU6-1140P-201ENST00000410517 SLC26A8Q96RN1 970 aa4.29□□□□□ -1.72
RNU6-1140P-201ENST00000410517 BHLHE41Q9C0J9 482 aaPredicted RBP4.29□□□□□ -1.72
RNU6-1140P-201ENST00000410517 BRPF3Q9ULD4 1205 aa4.29□□□□□ -1.72
RNU6-1140P-201ENST00000410517 NACADO15069 1562 aa4.28□□□□□ -1.72
RNU6-1140P-201ENST00000410517 CARNS1A5YM72 827 aa4.28□□□□□ -1.72
RNU6-1140P-201ENST00000410517 METTL12A8MUP2 240 aa4.28□□□□□ -1.72
RNU6-1140P-201ENST00000410517 GDNFP39905 211 aa4.28□□□□□ -1.72
RNU6-1140P-201ENST00000410517 PCDH1Q08174 1060 aa4.28□□□□□ -1.72
RNU6-1140P-201ENST00000410517 PDE3AQ14432 1141 aa4.28□□□□□ -1.72
RNU6-1140P-201ENST00000410517 ZNF423Q2M1K9 1284 aa4.28□□□□□ -1.72
RNU6-1140P-201ENST00000410517 NOM1Q5C9Z4 860 aaKnown RBP4.28□□□□□ -1.72
RNU6-1140P-201ENST00000410517 SMYD4Q8IYR2 804 aaPredicted RBP4.28□□□□□ -1.72
RNU6-1140P-201ENST00000410517 MARCH10Q8NA82 808 aaPredicted RBP4.28□□□□□ -1.72
RNU6-1140P-201ENST00000410517 DMRTB1Q96MA1 342 aa4.28□□□□□ -1.72
RNU6-1140P-201ENST00000410517 CHRDQ9H2X0 955 aa4.28□□□□□ -1.72
RNU6-1140P-201ENST00000410517 STIM2Q9P246 746 aa4.28□□□□□ -1.72
RNU6-1140P-201ENST00000410517 SHROOM4Q9ULL8 1493 aa4.28□□□□□ -1.72
RNU6-1140P-201ENST00000410517 ADAMTS20P59510 1910 aa4.28□□□□□ -1.72
RNU6-1140P-201ENST00000410517 RNGTTO60942 597 aaKnown RBP4.27□□□□□ -1.73
RNU6-1140P-201ENST00000410517 EDN3P14138 238 aa4.27□□□□□ -1.73
RNU6-1140P-201ENST00000410517 ATP2B2Q01814 1243 aa4.27□□□□□ -1.73
RNU6-1140P-201ENST00000410517 ZNF211Q13398 564 aaPredicted RBP4.27□□□□□ -1.73
RNU6-1140P-201ENST00000410517 ERICH6BQ5W0A0 696 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms