RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 RWDD3Q9Y3V2 267 aa5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 POTEB2H3BUK9 544 aa5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 CAPN9O14815 690 aa5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 MAGEA9P43362 315 aa5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 ZNF449Q6P9G9 518 aa5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 CCDC25Q86WR0 208 aa5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 TEKT4Q8WW24 435 aa5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 RUNDC1Q96C34 613 aa5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 KIF1BPQ96EK5 621 aa5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 JPH2Q9BR39 696 aaPredicted RBP5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 RIOK1Q9BRS2 568 aaKnown RBP5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 KIFC3Q9BVG8 833 aa5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 LSM14BQ9BX40 385 aaKnown RBP5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 EHMT1Q9H9B1 1298 aa5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 SCHIP1Q9P0W5 487 aaPredicted RBP5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 SNX2O60749 519 aa5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 FCHSD2O94868 740 aa5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 CAPN1P07384 714 aa5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 SLC3A2P08195 630 aaKnown RBP5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 POTEIP0CG38 1075 aa5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 BDNFP23560 247 aa5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 UBXN1Q04323 297 aa5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 OASLQ15646 514 aaKnown RBP5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 GEN1Q17RS7 908 aa5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 UVSSAQ2YD98 709 aa5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 HSP90AA4PQ58FG1 418 aa5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 DZIP3Q86Y13 1208 aaKnown RBP5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 TAB3Q8N5C8 712 aaPredicted RBP5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 ZNF397Q8NF99 534 aaPredicted RBP5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 SCYL1Q96KG9 808 aa5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 CEP63Q96MT8 703 aa5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 OSBPL10Q9BXB5 764 aa5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 STMN4Q9H169 189 aaPredicted RBP5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 CLSTN2Q9H4D0 955 aa5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 STARD7Q9NQZ5 370 aa5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 ATP5HO75947 161 aa5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 GNL1P36915 607 aaPredicted RBP5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 VEPH1Q14D04 833 aa5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 RASIP1Q5U651 963 aa5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 LARP1BQ659C4 914 aaKnown RBP5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 RELL1Q8IUW5 271 aa5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 GALNT6Q8NCL4 622 aa5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 IFT81Q8WYA0 676 aa5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 ZNF653Q96CK0 615 aa5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 UBN1Q9NPG3 1134 aa5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 INPP5FQ9Y2H2 1132 aa5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 POTEFA5A3E0 1075 aa5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 KLHL33A6NCF5 533 aa5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 ATP8B1O43520 1251 aa5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 MGEA5O60502 916 aa5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 SFPQP23246 707 aaKnown RBP eCLIP5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 ELF1P32519 619 aa5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 CAPN12Q6ZSI9 719 aa5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 SYCP3Q8IZU3 236 aa5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 TMC2Q8TDI7 906 aa5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 SIKE1Q9BRV8 207 aa5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 SBNO2Q9Y2G9 1366 aa5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 WDR91A4D1P6 747 aa5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 RASSF10A6NK89 507 aa5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 GOLGA8SH3BPF8 625 aa5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 MX2P20592 715 aa5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 TNNI2P48788 182 aa5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 PEX5P50542 639 aa5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 POLE2P56282 527 aa5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 ADCY1Q08828 1119 aa5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 CCDC6Q16204 474 aa5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 AGAP9Q5VTM2 703 aa5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 SMARCC2Q8TAQ2 1214 aa5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 LRRC59Q96AG4 307 aaKnown RBP5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 GCC1Q96CN9 775 aa5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 CCT7Q99832 543 aa5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 UTP14AQ9BVJ6 771 aaKnown RBP5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 ANLNQ9NQW6 1124 aa5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 COMMD8Q9NX08 183 aa5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 FOXN3O00409 490 aaPredicted RBP5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 PARP1P09874 1014 aaKnown RBP5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 U2AF2P26368 475 aaKnown RBP eCLIP5.85□□□□□ -1.476e-7■■□□□ 13.2
R3HDM1-204ENST00000410054 CCT6AP40227 531 aaKnown RBP5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 POU5F1BQ06416 359 aa5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 NCBP1Q09161 790 aaKnown RBP5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 SH3BP5LQ7L8J4 393 aa5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 PPHLN1Q8NEY8 458 aaKnown RBP5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 DDI1Q8WTU0 396 aa5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 RAPGEF5Q92565 580 aa5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 TNPO1Q92973 898 aaKnown RBP5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 RILPL2Q969X0 211 aa5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 SRPK1Q96SB4 655 aaKnown RBP5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 EIF2AK1Q9BQI3 630 aaKnown RBP5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 SDF4Q9BRK5 362 aa5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 CAPS2Q9BXY5 557 aa5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 PDGFDQ9GZP0 370 aaPredicted RBP5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 RPAP3Q9H6T3 665 aaPredicted RBP5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 GIMAP4Q9NUV9 329 aa5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 EIF4G1Q04637 1599 aaKnown RBP5.85□□□□□ -1.47
R3HDM1-204ENST00000410054 CEP85Q6P2H3 762 aa5.84□□□□□ -1.47
R3HDM1-204ENST00000410054 NFRKBQ6P4R8 1299 aa5.84□□□□□ -1.47
R3HDM1-204ENST00000410054 CATIPQ7Z7H3 387 aa5.84□□□□□ -1.47
R3HDM1-204ENST00000410054 ENOX1Q8TC92 643 aaKnown RBP5.84□□□□□ -1.47
R3HDM1-204ENST00000410054 LZICQ8WZA0 190 aa5.84□□□□□ -1.47
R3HDM1-204ENST00000410054 FERMT2Q96AC1 680 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms