RNA–Protein interactions for RNA: ENST00000409937.1

CNGA3-204, Transcript of cyclic nucleotide gated channel alpha 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CNGA3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA3-204ENST00000409937 ANKRD18BA2A2Z9 1011 aa16.24■□□□□ 0.19
CNGA3-204ENST00000409937 EVA1CP58658 441 aa16.24■□□□□ 0.19
CNGA3-204ENST00000409937 UTP14CQ5TAP6 766 aaKnown RBP16.24■□□□□ 0.19
CNGA3-204ENST00000409937 PDILTQ8N807 584 aa16.24■□□□□ 0.19
CNGA3-204ENST00000409937 VGLL2Q8N8G2 317 aa16.24■□□□□ 0.19
CNGA3-204ENST00000409937 CCDC150Q8NCX0 1101 aa16.24■□□□□ 0.19
CNGA3-204ENST00000409937 ZNF446Q9NWS9 450 aa16.24■□□□□ 0.19
CNGA3-204ENST00000409937 IMPACTQ9P2X3 320 aa16.24■□□□□ 0.19
CNGA3-204ENST00000409937 IQSEC3Q9UPP2 1182 aaPredicted RBP16.24■□□□□ 0.19
CNGA3-204ENST00000409937 HPSEQ9Y251 543 aa16.24■□□□□ 0.19
CNGA3-204ENST00000409937 ZBTB1Q9Y2K1 713 aa16.24■□□□□ 0.19
CNGA3-204ENST00000409937 PCDHA5Q9Y5H7 936 aa16.24■□□□□ 0.19
CNGA3-204ENST00000409937 TPM4P67936 248 aa16.24■□□□□ 0.19
CNGA3-204ENST00000409937 ZNF397Q8NF99 534 aaPredicted RBP16.24■□□□□ 0.19
CNGA3-204ENST00000409937 ERO1AQ96HE7 468 aa16.24■□□□□ 0.19
CNGA3-204ENST00000409937 SLC4A9Q96Q91 983 aa16.24■□□□□ 0.19
CNGA3-204ENST00000409937 FEZ1Q99689 392 aa16.24■□□□□ 0.19
CNGA3-204ENST00000409937 UTP14AQ9BVJ6 771 aaKnown RBP16.24■□□□□ 0.19
CNGA3-204ENST00000409937 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.24■□□□□ 0.19
CNGA3-204ENST00000409937 INTS13Q9NVM9 706 aa16.24■□□□□ 0.19
CNGA3-204ENST00000409937 ZSWIM5Q9P217 1185 aa16.24■□□□□ 0.19
CNGA3-204ENST00000409937 IFIT3O14879 490 aaKnown RBP16.23■□□□□ 0.19
CNGA3-204ENST00000409937 MIGA1Q8NAN2 632 aa16.23■□□□□ 0.19
CNGA3-204ENST00000409937 CNNM3Q8NE01 707 aa16.23■□□□□ 0.19
CNGA3-204ENST00000409937 EPC1Q9H2F5 836 aa16.23■□□□□ 0.19
CNGA3-204ENST00000409937 MAP3K15Q6ZN16 1313 aa16.23■□□□□ 0.19
CNGA3-204ENST00000409937 hCG_1642624A0A1W2PR95 340 aa16.23■□□□□ 0.19
CNGA3-204ENST00000409937 TCRBV5S4A2TA0A5A2 114 aa16.23■□□□□ 0.19
CNGA3-204ENST00000409937 NR5A1Q13285 461 aa16.23■□□□□ 0.19
CNGA3-204ENST00000409937 NKX1-1Q15270 411 aaPredicted RBP16.23■□□□□ 0.19
CNGA3-204ENST00000409937 GIGYF2Q6Y7W6 1299 aaKnown RBP16.23■□□□□ 0.19
CNGA3-204ENST00000409937 STRBPQ96SI9 672 aaKnown RBP16.23■□□□□ 0.19
CNGA3-204ENST00000409937 MYL5Q02045 173 aa16.22■□□□□ 0.19
CNGA3-204ENST00000409937 RESP18Q5W5W9 173 aa16.22■□□□□ 0.19
CNGA3-204ENST00000409937 ZNF771Q7L3S4 317 aaPredicted RBP16.22■□□□□ 0.19
CNGA3-204ENST00000409937 SEC31BQ9NQW1 1179 aa16.22■□□□□ 0.19
CNGA3-204ENST00000409937 TUBE1Q9UJT0 475 aa16.22■□□□□ 0.19
CNGA3-204ENST00000409937 KCNH3Q9ULD8 1083 aa16.22■□□□□ 0.19
CNGA3-204ENST00000409937 PDE8BO95263 885 aa16.22■□□□□ 0.19
CNGA3-204ENST00000409937 TRIM29Q14134 588 aa16.22■□□□□ 0.19
CNGA3-204ENST00000409937 USP49Q70CQ1 688 aa16.22■□□□□ 0.19
CNGA3-204ENST00000409937 FAM205CA6NFA0 338 aa16.21■□□□□ 0.19
CNGA3-204ENST00000409937 TOB1P50616 345 aaPredicted RBP16.21■□□□□ 0.19
CNGA3-204ENST00000409937 FMR1Q06787 632 aaKnown RBP eCLIP16.21■□□□□ 0.19
CNGA3-204ENST00000409937 RASGRF1Q13972 1273 aa16.21■□□□□ 0.19
CNGA3-204ENST00000409937 OXER1Q8TDS5 423 aa16.21■□□□□ 0.19
CNGA3-204ENST00000409937 ZBTB9Q96C00 473 aa16.21■□□□□ 0.19
CNGA3-204ENST00000409937 CHMP4CQ96CF2 233 aa16.21■□□□□ 0.19
CNGA3-204ENST00000409937 GTPBP4Q9BZE4 634 aaKnown RBP16.21■□□□□ 0.19
CNGA3-204ENST00000409937 NAPBQ9H115 298 aa16.21■□□□□ 0.19
CNGA3-204ENST00000409937 SLC12A7Q9Y666 1083 aa16.21■□□□□ 0.19
CNGA3-204ENST00000409937 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.21■□□□□ 0.19
CNGA3-204ENST00000409937 CASP1P29466 404 aa16.21■□□□□ 0.19
CNGA3-204ENST00000409937 KRBA2Q6ZNG9 492 aa16.21■□□□□ 0.19
CNGA3-204ENST00000409937 IFNL3Q8IZI9 196 aa16.21■□□□□ 0.19
CNGA3-204ENST00000409937 NUP133Q8WUM0 1156 aa16.21■□□□□ 0.19
CNGA3-204ENST00000409937 PLA2G12BQ9BX93 195 aa16.21■□□□□ 0.19
CNGA3-204ENST00000409937 LCORLQ8N3X6 602 aa16.2■□□□□ 0.18
CNGA3-204ENST00000409937 IKBKBO14920 756 aa16.2■□□□□ 0.18
CNGA3-204ENST00000409937 CDKL5O76039 1030 aa16.2■□□□□ 0.18
CNGA3-204ENST00000409937 ADKP55263 362 aaKnown RBP16.2■□□□□ 0.18
CNGA3-204ENST00000409937 SSRP1Q08945 709 aaKnown RBP16.2■□□□□ 0.18
CNGA3-204ENST00000409937 TRIM28Q13263 835 aaKnown RBP16.2■□□□□ 0.18
CNGA3-204ENST00000409937 CPLX2Q6PUV4 134 aaKnown RBP16.2■□□□□ 0.18
CNGA3-204ENST00000409937 DIS3L2Q8IYB7 885 aaKnown RBP16.2■□□□□ 0.18
CNGA3-204ENST00000409937 CARD10Q9BWT7 1032 aa16.2■□□□□ 0.18
CNGA3-204ENST00000409937 SERTAD1Q9UHV2 236 aa16.2■□□□□ 0.18
CNGA3-204ENST00000409937 PCDHB6Q9Y5E3 794 aa16.2■□□□□ 0.18
CNGA3-204ENST00000409937 STRCQ7RTU9 1775 aa16.2■□□□□ 0.18
CNGA3-204ENST00000409937 POLR2DO15514 142 aaKnown RBP16.19■□□□□ 0.18
CNGA3-204ENST00000409937 COBLO75128 1261 aa16.19■□□□□ 0.18
CNGA3-204ENST00000409937 PPP6R2O75170 966 aa16.19■□□□□ 0.18
CNGA3-204ENST00000409937 MORC2Q9Y6X9 1032 aaPredicted RBP16.19■□□□□ 0.18
CNGA3-204ENST00000409937 WTIPA6NIX2 430 aaPredicted RBP16.19■□□□□ 0.18
CNGA3-204ENST00000409937 URI1O94763 535 aaPredicted RBP16.19■□□□□ 0.18
CNGA3-204ENST00000409937 TOP1P11387 765 aaKnown RBP16.19■□□□□ 0.18
CNGA3-204ENST00000409937 UBE3CQ15386 1083 aa16.19■□□□□ 0.18
CNGA3-204ENST00000409937 ARHGAP29Q52LW3 1261 aa16.19■□□□□ 0.18
CNGA3-204ENST00000409937 OLFM4Q6UX06 510 aa16.19■□□□□ 0.18
CNGA3-204ENST00000409937 SPATA5Q8NB90 893 aa16.19■□□□□ 0.18
CNGA3-204ENST00000409937 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.19■□□□□ 0.18
CNGA3-204ENST00000409937 WDR19Q8NEZ3 1342 aa16.19■□□□□ 0.18
CNGA3-204ENST00000409937 STARD3NLO95772 234 aa16.18■□□□□ 0.18
CNGA3-204ENST00000409937 TICAM2Q86XR7 235 aa16.18■□□□□ 0.18
CNGA3-204ENST00000409937 NOSTRINQ8IVI9 506 aa16.18■□□□□ 0.18
CNGA3-204ENST00000409937 VSTM4Q8IW00 320 aa16.18■□□□□ 0.18
CNGA3-204ENST00000409937 JMYQ8N9B5 988 aa16.18■□□□□ 0.18
CNGA3-204ENST00000409937 DESI2Q9BSY9 194 aa16.18■□□□□ 0.18
CNGA3-204ENST00000409937 L2HGDHQ9H9P8 463 aa16.18■□□□□ 0.18
CNGA3-204ENST00000409937 FBXO3Q9UK99 471 aa16.18■□□□□ 0.18
CNGA3-204ENST00000409937 MAN1B1Q9UKM7 699 aa16.18■□□□□ 0.18
CNGA3-204ENST00000409937 PSDA5PKW4 1024 aaPredicted RBP16.18■□□□□ 0.18
CNGA3-204ENST00000409937 TDO2P48775 406 aa16.18■□□□□ 0.18
CNGA3-204ENST00000409937 BCAMP50895 628 aa16.18■□□□□ 0.18
CNGA3-204ENST00000409937 TTF1Q15361 905 aaPredicted RBP16.18■□□□□ 0.18
CNGA3-204ENST00000409937 CCDC93Q567U6 631 aa16.18■□□□□ 0.18
CNGA3-204ENST00000409937 TRIM65Q6PJ69 517 aa16.18■□□□□ 0.18
CNGA3-204ENST00000409937 KCND1Q9NSA2 647 aa16.18■□□□□ 0.18
CNGA3-204ENST00000409937 ATRNO75882 1429 aa16.18■□□□□ 0.18
CNGA3-204ENST00000409937 GSG1L2A8MUP6 293 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms