RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 SUGT1Q9Y2Z0 365 aa16.8■□□□□ 0.28
MINDY4-202ENST00000409881 MAST2Q6P0Q8 1798 aa16.8■□□□□ 0.28
MINDY4-202ENST00000409881 FZD9O00144 591 aa16.79■□□□□ 0.28
MINDY4-202ENST00000409881 VIL1P09327 827 aaKnown RBP16.79■□□□□ 0.28
MINDY4-202ENST00000409881 CUL4AQ13619 759 aa16.79■□□□□ 0.28
MINDY4-202ENST00000409881 C9orf131Q5VYM1 1079 aa16.79■□□□□ 0.28
MINDY4-202ENST00000409881 ZNF589Q86UQ0 364 aaPredicted RBP16.79■□□□□ 0.28
MINDY4-202ENST00000409881 PALD1Q9ULE6 856 aa16.79■□□□□ 0.28
MINDY4-202ENST00000409881 ZBTB12Q9Y330 459 aaPredicted RBP16.79■□□□□ 0.28
MINDY4-202ENST00000409881 RAD50Q92878 1312 aa16.79■□□□□ 0.28
MINDY4-202ENST00000409881 ZNF646O15015 1829 aaPredicted RBP16.79■□□□□ 0.28
MINDY4-202ENST00000409881 SCNN1DP51172 638 aa16.79■□□□□ 0.28
MINDY4-202ENST00000409881 GSTO1P78417 241 aa16.79■□□□□ 0.28
MINDY4-202ENST00000409881 TNIP1Q15025 636 aa16.79■□□□□ 0.28
MINDY4-202ENST00000409881 UVSSAQ2YD98 709 aa16.79■□□□□ 0.28
MINDY4-202ENST00000409881 SBF1O95248 1867 aa16.79■□□□□ 0.28
MINDY4-202ENST00000409881 PSME4Q14997 1843 aa16.79■□□□□ 0.28
MINDY4-202ENST00000409881 ZNF541Q9H0D2 1346 aa16.78■□□□□ 0.28
MINDY4-202ENST00000409881 PLCB2Q00722 1185 aa16.78■□□□□ 0.28
MINDY4-202ENST00000409881 FAM184AQ8NB25 1140 aa16.78■□□□□ 0.28
MINDY4-202ENST00000409881 ANO2Q9NQ90 1003 aa16.78■□□□□ 0.28
MINDY4-202ENST00000409881 SPTLC3Q9NUV7 552 aa16.78■□□□□ 0.28
MINDY4-202ENST00000409881 GJA3Q9Y6H8 435 aa16.78■□□□□ 0.28
MINDY4-202ENST00000409881 MYO3BQ8WXR4 1341 aa16.78■□□□□ 0.28
MINDY4-202ENST00000409881 PDCL2Q8N4E4 241 aa16.78■□□□□ 0.28
MINDY4-202ENST00000409881 AIDAQ96BJ3 306 aa16.78■□□□□ 0.28
MINDY4-202ENST00000409881 MBD4O95243 580 aa16.77■□□□□ 0.28
MINDY4-202ENST00000409881 CCDC171Q6TFL3 1326 aa16.77■□□□□ 0.28
MINDY4-202ENST00000409881 GPAA1O43292 621 aa16.77■□□□□ 0.27
MINDY4-202ENST00000409881 IGSF3O75054 1194 aa16.77■□□□□ 0.27
MINDY4-202ENST00000409881 LDHCP07864 332 aa16.77■□□□□ 0.27
MINDY4-202ENST00000409881 MCM2P49736 904 aa16.77■□□□□ 0.27
MINDY4-202ENST00000409881 SLF2Q8IX21 1173 aa16.77■□□□□ 0.27
MINDY4-202ENST00000409881 DICER1Q9UPY3 1922 aaKnown RBP16.77■□□□□ 0.27
MINDY4-202ENST00000409881 MROH7-TTC4A0A0A0MT08 1334 aa16.77■□□□□ 0.27
MINDY4-202ENST00000409881 MAGEB6P1A0A0J9YX57 407 aa16.76■□□□□ 0.27
MINDY4-202ENST00000409881 ARMT1Q9H993 441 aa16.76■□□□□ 0.27
MINDY4-202ENST00000409881 AATFQ9NY61 560 aaKnown RBP eCLIP16.76■□□□□ 0.27
MINDY4-202ENST00000409881 U2AF2P26368 475 aaKnown RBP eCLIP16.76■□□□□ 0.27
MINDY4-202ENST00000409881 DYNLL1P63167 89 aaKnown RBP16.76■□□□□ 0.27
MINDY4-202ENST00000409881 LCORLQ8N3X6 602 aa16.76■□□□□ 0.27
MINDY4-202ENST00000409881 RIOK3O14730 519 aaKnown RBP16.75■□□□□ 0.27
MINDY4-202ENST00000409881 TMED8Q6PL24 325 aaPredicted RBP16.75■□□□□ 0.27
MINDY4-202ENST00000409881 AGBL3Q8NEM8 1001 aa16.75■□□□□ 0.27
MINDY4-202ENST00000409881 NOL10Q9BSC4 688 aaKnown RBP16.75■□□□□ 0.27
MINDY4-202ENST00000409881 UPF3BQ9BZI7 483 aaKnown RBP16.75■□□□□ 0.27
MINDY4-202ENST00000409881 TIAM2Q8IVF5 1701 aa16.75■□□□□ 0.27
MINDY4-202ENST00000409881 KIF20AO95235 890 aa16.75■□□□□ 0.27
MINDY4-202ENST00000409881 RBM5P52756 815 aaKnown RBP eCLIP16.75■□□□□ 0.27
MINDY4-202ENST00000409881 CCDC183Q5T5S1 534 aa16.75■□□□□ 0.27
MINDY4-202ENST00000409881 TEKT1Q969V4 418 aa16.75■□□□□ 0.27
MINDY4-202ENST00000409881 INTS4Q96HW7 963 aaKnown RBP16.75■□□□□ 0.27
MINDY4-202ENST00000409881 GMLQ99445 158 aa16.75■□□□□ 0.27
MINDY4-202ENST00000409881 DAGLAQ9Y4D2 1042 aa16.75■□□□□ 0.27
MINDY4-202ENST00000409881 MYH2Q9UKX2 1941 aa16.75■□□□□ 0.27
MINDY4-202ENST00000409881 LETM1O95202 739 aaPredicted RBP16.74■□□□□ 0.27
MINDY4-202ENST00000409881 BTDP43251 543 aa16.74■□□□□ 0.27
MINDY4-202ENST00000409881 CRKP46108 304 aa16.74■□□□□ 0.27
MINDY4-202ENST00000409881 PYCARDQ9ULZ3 195 aa16.74■□□□□ 0.27
MINDY4-202ENST00000409881 USP17L8P0C7I0 530 aa16.74■□□□□ 0.27
MINDY4-202ENST00000409881 GMPSP49915 693 aaPredicted RBP16.74■□□□□ 0.27
MINDY4-202ENST00000409881 VPS53Q5VIR6 699 aa16.74■□□□□ 0.27
MINDY4-202ENST00000409881 OGFOD1Q8N543 542 aa16.74■□□□□ 0.27
MINDY4-202ENST00000409881 STRBPQ96SI9 672 aaKnown RBP16.74■□□□□ 0.27
MINDY4-202ENST00000409881 RIOK1Q9BRS2 568 aaKnown RBP16.74■□□□□ 0.27
MINDY4-202ENST00000409881 HDAC9Q9UKV0 1011 aa16.74■□□□□ 0.27
MINDY4-202ENST00000409881 GAKO14976 1311 aa16.74■□□□□ 0.27
MINDY4-202ENST00000409881 TCHHQ07283 1943 aa16.73■□□□□ 0.27
MINDY4-202ENST00000409881 DCAF8L1A6NGE4 600 aa16.73■□□□□ 0.27
MINDY4-202ENST00000409881 KDM4AO75164 1064 aa16.73■□□□□ 0.27
MINDY4-202ENST00000409881 BAG3O95817 575 aa16.73■□□□□ 0.27
MINDY4-202ENST00000409881 PTH1RQ03431 593 aa16.73■□□□□ 0.27
MINDY4-202ENST00000409881 LSG1Q9H089 658 aaKnown RBP16.73■□□□□ 0.27
MINDY4-202ENST00000409881 CNPY2Q9Y2B0 182 aa16.73■□□□□ 0.27
MINDY4-202ENST00000409881 ADAMTSL1Q8N6G6 1762 aa16.73■□□□□ 0.27
MINDY4-202ENST00000409881 HHIPL2Q6UWX4 724 aa16.73■□□□□ 0.27
MINDY4-202ENST00000409881 PCDHAC2Q9Y5I4 1007 aa16.73■□□□□ 0.27
MINDY4-202ENST00000409881 WDR33Q9C0J8 1336 aaKnown RBP16.73■□□□□ 0.27
MINDY4-202ENST00000409881 MCCP23508 829 aa16.72■□□□□ 0.27
MINDY4-202ENST00000409881 RPS12P25398 132 aaKnown RBP16.72■□□□□ 0.27
MINDY4-202ENST00000409881 GPC2Q8N158 579 aa16.72■□□□□ 0.27
MINDY4-202ENST00000409881 FAM163AQ96GL9 167 aaPredicted RBP16.72■□□□□ 0.27
MINDY4-202ENST00000409881 KCNF1Q9H3M0 494 aa16.72■□□□□ 0.27
MINDY4-202ENST00000409881 SERPINA10Q9UK55 444 aa16.72■□□□□ 0.27
MINDY4-202ENST00000409881 SLC4A4Q9Y6R1 1079 aa16.72■□□□□ 0.27
MINDY4-202ENST00000409881 GPR75-ASB3A0A0A6YYF3 556 aa16.72■□□□□ 0.27
MINDY4-202ENST00000409881 SHTN1A0MZ66 631 aa16.72■□□□□ 0.27
MINDY4-202ENST00000409881 AP5Z1O43299 807 aa16.72■□□□□ 0.27
MINDY4-202ENST00000409881 PRKAB2O43741 272 aa16.72■□□□□ 0.27
MINDY4-202ENST00000409881 APPP05067 770 aa16.72■□□□□ 0.27
MINDY4-202ENST00000409881 HDLBPQ00341 1268 aaKnown RBP16.72■□□□□ 0.27
MINDY4-202ENST00000409881 CFAP100Q494V2 611 aa16.72■□□□□ 0.27
MINDY4-202ENST00000409881 KIAA1524Q8TCG1 905 aa16.72■□□□□ 0.27
MINDY4-202ENST00000409881 HSPD1P10809 573 aaKnown RBP16.71■□□□□ 0.27
MINDY4-202ENST00000409881 SPC24Q8NBT2 197 aa16.71■□□□□ 0.27
MINDY4-202ENST00000409881 SH3RF3Q8TEJ3 882 aaPredicted RBP16.71■□□□□ 0.27
MINDY4-202ENST00000409881 FGD1P98174 961 aa16.71■□□□□ 0.26
MINDY4-202ENST00000409881 ZDHHC15Q96MV8 337 aa16.71■□□□□ 0.26
MINDY4-202ENST00000409881 DDNO94850 711 aaPredicted RBP16.7■□□□□ 0.26
MINDY4-202ENST00000409881 PPP4CP60510 307 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms