RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 POLRMTO00411 1230 aaKnown RBP7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 JAK2O60674 1132 aa7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 PCP11498 1178 aaKnown RBP7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 ZNF445P59923 1031 aa7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 UBE2HP62256 183 aa7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 CCT2P78371 535 aaKnown RBP7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 KRT85P78386 507 aa7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 SART3Q15020 963 aaKnown RBP7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 FOXD4L6Q3SYB3 417 aaPredicted RBP7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 ZNF787Q6DD87 383 aa7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 CAVIN1Q6NZI2 390 aaKnown RBP7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 CPLX2Q6PUV4 134 aaKnown RBP7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 FOXD4L3Q6VB84 417 aaPredicted RBP7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 ZNF804AQ7Z570 1209 aa7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 TBC1D10CQ8IV04 446 aa7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 LCORLQ8N3X6 602 aa7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 MIGA1Q8NAN2 632 aa7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 NSUN7Q8NE18 718 aaKnown RBP7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 TDRD7Q8NHU6 1098 aaKnown RBP7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 GPT2Q8TD30 523 aa7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 STAG1Q8WVM7 1258 aa7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 NSUN4Q96CB9 384 aaKnown RBP7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 BRIP1Q9BX63 1249 aa7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 SCAND2PQ9GZW5 306 aaPredicted RBP7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 NBPF3Q9H094 633 aa7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 ANAPC4Q9UJX5 808 aa7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 DDX60Q8IY21 1712 aaKnown RBP7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 BCORQ6W2J9 1755 aa7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 C4BP0C0L5 1744 aa7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 SALL1Q9NSC2 1324 aa7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 KLF18A0A0U1RQI7 1052 aa7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 PTPDC1A2A3K4 754 aa7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 CPLX1O14810 134 aa7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 PRKAB2O43741 272 aa7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 LETM1O95202 739 aaPredicted RBP7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 CTDNEP1O95476 244 aa7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 LDHCP07864 332 aa7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 LIFRP42702 1097 aa7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 ANTXR2P58335 489 aa7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 MECOMQ03112 1051 aa7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 DNM1Q05193 864 aaKnown RBP7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 ATL3Q6DD88 541 aa7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 SYNE3Q6ZMZ3 975 aa7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 SGMS1Q86VZ5 419 aa7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 IGDCC4Q8TDY8 1250 aa7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 DDX11Q96FC9 970 aa7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 CHAMP1Q96JM3 812 aa7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 RIOK1Q9BRS2 568 aaKnown RBP7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 EPB41L4AQ9HCS5 686 aaPredicted RBP7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 ZSWIM5Q9P217 1185 aa7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 BRPF3Q9ULD4 1205 aa7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 NSFL1CQ9UNZ2 370 aaKnown RBP7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 CNPY2Q9Y2B0 182 aa7.35□□□□□ -1.23
GTF3C3-202ENST00000409364 AKAP11Q9UKA4 1901 aa7.34□□□□□ -1.23
GTF3C3-202ENST00000409364 LY75O60449 1722 aa7.34□□□□□ -1.23
GTF3C3-202ENST00000409364 SCN7AQ01118 1682 aa7.34□□□□□ -1.23
GTF3C3-202ENST00000409364 IRS2Q9Y4H2 1338 aa7.34□□□□□ -1.23
GTF3C3-202ENST00000409364 ERICH2A1L162 156 aa7.34□□□□□ -1.23
GTF3C3-202ENST00000409364 B4E1Z4 1266 aa7.34□□□□□ -1.23
GTF3C3-202ENST00000409364 SH2B2O14492 632 aaPredicted RBP7.34□□□□□ -1.23
GTF3C3-202ENST00000409364 CDKL5O76039 1030 aa7.34□□□□□ -1.23
GTF3C3-202ENST00000409364 KLRK1P26718 216 aa7.34□□□□□ -1.23
GTF3C3-202ENST00000409364 ALDH1B1P30837 517 aa7.34□□□□□ -1.23
GTF3C3-202ENST00000409364 NT5C2P49902 561 aa7.34□□□□□ -1.23
GTF3C3-202ENST00000409364 GSTO1P78417 241 aa7.34□□□□□ -1.23
GTF3C3-202ENST00000409364 PPARAQ07869 468 aa7.34□□□□□ -1.23
GTF3C3-202ENST00000409364 DDR1Q08345 913 aa7.34□□□□□ -1.23
GTF3C3-202ENST00000409364 CHAF1AQ13111 956 aaPredicted RBP7.34□□□□□ -1.23
GTF3C3-202ENST00000409364 ZSCAN23Q3MJ62 389 aa7.34□□□□□ -1.23
GTF3C3-202ENST00000409364 TMEM67Q5HYA8 995 aa7.34□□□□□ -1.23
GTF3C3-202ENST00000409364 CYB5R4Q7L1T6 521 aa7.34□□□□□ -1.23
GTF3C3-202ENST00000409364 CDC37L1Q7L3B6 337 aa7.34□□□□□ -1.23
GTF3C3-202ENST00000409364 TXNRD3Q86VQ6 643 aa7.34□□□□□ -1.23
GTF3C3-202ENST00000409364 CERS3Q8IU89 383 aa7.34□□□□□ -1.23
GTF3C3-202ENST00000409364 SP8Q8IXZ3 490 aa7.34□□□□□ -1.23
GTF3C3-202ENST00000409364 CRNKL1Q9BZJ0 848 aaKnown RBP7.34□□□□□ -1.23
GTF3C3-202ENST00000409364 NCOA5Q9HCD5 579 aaKnown RBP7.34□□□□□ -1.23
GTF3C3-202ENST00000409364 ATP8A2Q9NTI2 1148 aa7.34□□□□□ -1.23
GTF3C3-202ENST00000409364 GGA1Q9UJY5 639 aa7.34□□□□□ -1.23
GTF3C3-202ENST00000409364 CFAP45Q9UL16 551 aa7.34□□□□□ -1.23
GTF3C3-202ENST00000409364 EP400Q96L91 3159 aa7.33□□□□□ -1.24
GTF3C3-202ENST00000409364 ELP1O95163 1332 aa7.33□□□□□ -1.24
GTF3C3-202ENST00000409364 GOLGA8BA8MQT2 603 aa7.33□□□□□ -1.24
GTF3C3-202ENST00000409364 IFIT3O14879 490 aaKnown RBP7.33□□□□□ -1.24
GTF3C3-202ENST00000409364 KDM4AO75164 1064 aa7.33□□□□□ -1.24
GTF3C3-202ENST00000409364 BAG3O95817 575 aa7.33□□□□□ -1.24
GTF3C3-202ENST00000409364 LDHBP07195 334 aaKnown RBP7.33□□□□□ -1.24
GTF3C3-202ENST00000409364 XRCC6P12956 609 aaKnown RBP eCLIP7.33□□□□□ -1.24
GTF3C3-202ENST00000409364 PDE6BP35913 854 aa7.33□□□□□ -1.24
GTF3C3-202ENST00000409364 GPSM2P81274 684 aa7.33□□□□□ -1.24
GTF3C3-202ENST00000409364 CTDSPL2Q05D32 466 aa7.33□□□□□ -1.24
GTF3C3-202ENST00000409364 PPP2R5BQ15173 497 aa7.33□□□□□ -1.24
GTF3C3-202ENST00000409364 NFXL1Q6ZNB6 911 aa7.33□□□□□ -1.24
GTF3C3-202ENST00000409364 ADGRA1Q86SQ6 560 aa7.33□□□□□ -1.24
GTF3C3-202ENST00000409364 FERMT3Q86UX7 667 aa7.33□□□□□ -1.24
GTF3C3-202ENST00000409364 COL23A1Q86Y22 540 aaPredicted RBP7.33□□□□□ -1.24
GTF3C3-202ENST00000409364 DZIP1Q86YF9 867 aaKnown RBP7.33□□□□□ -1.24
GTF3C3-202ENST00000409364 ESR2Q92731 530 aa7.33□□□□□ -1.24
GTF3C3-202ENST00000409364 ZNF775Q96BV0 537 aaPredicted RBP7.33□□□□□ -1.24
GTF3C3-202ENST00000409364 TMX4Q9H1E5 349 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms