RNA–Protein interactions for RNA: ENST00000409252.6

SH3D19-202, Transcript of SH3 domain containing 19, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SH3D19, Length 4,888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-202ENST00000409252 GOPCQ9HD26 462 aa9.79□□□□□ -0.84
SH3D19-202ENST00000409252 ME1P48163 572 aa9.78□□□□□ -0.84
SH3D19-202ENST00000409252 KRT85P78386 507 aa9.78□□□□□ -0.84
SH3D19-202ENST00000409252 CERKLQ49MI3 558 aaPredicted RBP9.78□□□□□ -0.84
SH3D19-202ENST00000409252 CCDC148Q8NFR7 591 aa9.78□□□□□ -0.84
SH3D19-202ENST00000409252 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.78□□□□□ -0.84
SH3D19-202ENST00000409252 UTYO14607 1347 aa9.78□□□□□ -0.84
SH3D19-202ENST00000409252 MRC1P22897 1456 aa9.78□□□□□ -0.84
SH3D19-202ENST00000409252 NAPAP54920 295 aa9.78□□□□□ -0.84
SH3D19-202ENST00000409252 ZMYM1Q5SVZ6 1142 aa9.78□□□□□ -0.84
SH3D19-202ENST00000409252 AKNAD1Q5T1N1 836 aa9.78□□□□□ -0.84
SH3D19-202ENST00000409252 ARMC9Q7Z3E5 817 aa9.78□□□□□ -0.84
SH3D19-202ENST00000409252 LCORLQ8N3X6 602 aa9.78□□□□□ -0.84
SH3D19-202ENST00000409252 LMNB1P20700 586 aa9.78□□□□□ -0.84
SH3D19-202ENST00000409252 IRX3P78415 501 aaPredicted RBP9.78□□□□□ -0.84
SH3D19-202ENST00000409252 C8orf34Q49A92 452 aa9.78□□□□□ -0.84
SH3D19-202ENST00000409252 TMEM87BQ96K49 555 aa9.78□□□□□ -0.84
SH3D19-202ENST00000409252 HSPD1P10809 573 aaKnown RBP9.78□□□□□ -0.84
SH3D19-202ENST00000409252 RUFY3Q7L099 469 aa9.78□□□□□ -0.84
SH3D19-202ENST00000409252 USP26Q9BXU7 913 aa9.78□□□□□ -0.84
SH3D19-202ENST00000409252 ABT1Q9ULW3 272 aaKnown RBP9.78□□□□□ -0.84
SH3D19-202ENST00000409252 CEP131Q9UPN4 1083 aa9.78□□□□□ -0.84
SH3D19-202ENST00000409252 M0R2C6 588 aa9.77□□□□□ -0.84
SH3D19-202ENST00000409252 PDIA4P13667 645 aaKnown RBP9.77□□□□□ -0.84
SH3D19-202ENST00000409252 SLC1A4P43007 532 aa9.77□□□□□ -0.84
SH3D19-202ENST00000409252 SMARCC2Q8TAQ2 1214 aa9.77□□□□□ -0.84
SH3D19-202ENST00000409252 GJB2P29033 226 aa9.77□□□□□ -0.85
SH3D19-202ENST00000409252 CACNB3P54284 484 aa9.77□□□□□ -0.85
SH3D19-202ENST00000409252 SKOR2Q2VWA4 1001 aaPredicted RBP9.77□□□□□ -0.85
SH3D19-202ENST00000409252 MICALL2Q8IY33 904 aa9.77□□□□□ -0.85
SH3D19-202ENST00000409252 SMCR8Q8TEV9 937 aaPredicted RBP9.77□□□□□ -0.85
SH3D19-202ENST00000409252 SDF4Q9BRK5 362 aa9.77□□□□□ -0.85
SH3D19-202ENST00000409252 RBM27Q9P2N5 1060 aaKnown RBP9.77□□□□□ -0.85
SH3D19-202ENST00000409252 SSBP05455 408 aaKnown RBP eCLIP9.77□□□□□ -0.85
SH3D19-202ENST00000409252 KIF4BQ2VIQ3 1234 aa9.77□□□□□ -0.85
SH3D19-202ENST00000409252 TDRD3Q9H7E2 651 aaKnown RBP9.77□□□□□ -0.85
SH3D19-202ENST00000409252 RBM28Q9NW13 759 aaKnown RBP9.77□□□□□ -0.85
SH3D19-202ENST00000409252 CLIP2Q9UDT6 1046 aa9.77□□□□□ -0.85
SH3D19-202ENST00000409252 PALD1Q9ULE6 856 aa9.77□□□□□ -0.85
SH3D19-202ENST00000409252 CPA1P15085 419 aa9.77□□□□□ -0.85
SH3D19-202ENST00000409252 OSBPL3Q9H4L5 887 aa9.77□□□□□ -0.85
SH3D19-202ENST00000409252 CYP2E1P05181 493 aaPredicted RBP9.76□□□□□ -0.85
SH3D19-202ENST00000409252 ICA1Q05084 483 aa9.76□□□□□ -0.85
SH3D19-202ENST00000409252 ABCB5Q2M3G0 1257 aa9.76□□□□□ -0.85
SH3D19-202ENST00000409252 STRIP1Q5VSL9 837 aa9.76□□□□□ -0.85
SH3D19-202ENST00000409252 GADL1Q6ZQY3 521 aa9.76□□□□□ -0.85
SH3D19-202ENST00000409252 AKT1S1Q96B36 256 aa9.76□□□□□ -0.85
SH3D19-202ENST00000409252 DHX36Q9H2U1 1008 aaKnown RBP9.76□□□□□ -0.85
SH3D19-202ENST00000409252 KINO60870 393 aaKnown RBP9.76□□□□□ -0.85
SH3D19-202ENST00000409252 TPM2P07951 284 aa9.76□□□□□ -0.85
SH3D19-202ENST00000409252 RASSF7Q02833 373 aa9.76□□□□□ -0.85
SH3D19-202ENST00000409252 C9orf131Q5VYM1 1079 aa9.76□□□□□ -0.85
SH3D19-202ENST00000409252 OLFM4Q6UX06 510 aa9.76□□□□□ -0.85
SH3D19-202ENST00000409252 C3orf67Q6ZVT6 689 aa9.76□□□□□ -0.85
SH3D19-202ENST00000409252 IL27Q8NEV9 243 aa9.76□□□□□ -0.85
SH3D19-202ENST00000409252 ALG1Q9BT22 464 aa9.76□□□□□ -0.85
SH3D19-202ENST00000409252 FAM13BQ9NYF5 915 aa9.76□□□□□ -0.85
SH3D19-202ENST00000409252 CFAP45Q9UL16 551 aa9.76□□□□□ -0.85
SH3D19-202ENST00000409252 BECN2A8MW95 431 aa9.76□□□□□ -0.85
SH3D19-202ENST00000409252 PRKAB2O43741 272 aa9.76□□□□□ -0.85
SH3D19-202ENST00000409252 RPS6KB1P23443 525 aa9.76□□□□□ -0.85
SH3D19-202ENST00000409252 PUS7LQ9H0K6 701 aaKnown RBP9.76□□□□□ -0.85
SH3D19-202ENST00000409252 ZHX3Q9H4I2 956 aa9.76□□□□□ -0.85
SH3D19-202ENST00000409252 ANGEL1Q9UNK9 670 aaKnown RBP9.76□□□□□ -0.85
SH3D19-202ENST00000409252 IREB2P48200 963 aaKnown RBP9.76□□□□□ -0.85
SH3D19-202ENST00000409252 AK2P54819 239 aa9.76□□□□□ -0.85
SH3D19-202ENST00000409252 SPATA32Q96LK8 384 aa9.76□□□□□ -0.85
SH3D19-202ENST00000409252 SWAP70Q9UH65 585 aa9.76□□□□□ -0.85
SH3D19-202ENST00000409252 HACL1Q9UJ83 578 aa9.76□□□□□ -0.85
SH3D19-202ENST00000409252 SNX14Q9Y5W7 946 aa9.76□□□□□ -0.85
SH3D19-202ENST00000409252 E7EWF7 191 aa9.75□□□□□ -0.85
SH3D19-202ENST00000409252 PSMD14O00487 310 aa9.75□□□□□ -0.85
SH3D19-202ENST00000409252 FGAP02671 866 aa9.75□□□□□ -0.85
SH3D19-202ENST00000409252 MIGA2Q7L4E1 593 aa9.75□□□□□ -0.85
SH3D19-202ENST00000409252 APOBEC3FQ8IUX4 373 aaKnown RBP9.75□□□□□ -0.85
SH3D19-202ENST00000409252 NOC3LQ8WTT2 800 aaKnown RBP9.75□□□□□ -0.85
SH3D19-202ENST00000409252 TMX3Q96JJ7 454 aa9.75□□□□□ -0.85
SH3D19-202ENST00000409252 BCL2L12Q9HB09 334 aa9.75□□□□□ -0.85
SH3D19-202ENST00000409252 ZBTB12Q9Y330 459 aaPredicted RBP9.75□□□□□ -0.85
SH3D19-202ENST00000409252 MROH7-TTC4A0A0A0MT08 1334 aa9.75□□□□□ -0.85
SH3D19-202ENST00000409252 ARID4AP29374 1257 aaPredicted RBP9.75□□□□□ -0.85
SH3D19-202ENST00000409252 PI4K2BQ8TCG2 481 aa9.75□□□□□ -0.85
SH3D19-202ENST00000409252 SH3RF3Q8TEJ3 882 aaPredicted RBP9.75□□□□□ -0.85
SH3D19-202ENST00000409252 CNOT7Q9UIV1 285 aaKnown RBP9.75□□□□□ -0.85
SH3D19-202ENST00000409252 SERPINB13Q9UIV8 391 aa9.75□□□□□ -0.85
SH3D19-202ENST00000409252 GDF11O95390 407 aa9.75□□□□□ -0.85
SH3D19-202ENST00000409252 PTH1RQ03431 593 aa9.75□□□□□ -0.85
SH3D19-202ENST00000409252 TMEM266Q2M3C6 531 aa9.75□□□□□ -0.85
SH3D19-202ENST00000409252 KRT26Q7Z3Y9 468 aa9.75□□□□□ -0.85
SH3D19-202ENST00000409252 OSBP2Q969R2 916 aa9.75□□□□□ -0.85
SH3D19-202ENST00000409252 C6orf50Q9HD87 102 aa9.75□□□□□ -0.85
SH3D19-202ENST00000409252 IVNS1ABPQ9Y6Y0 642 aa9.75□□□□□ -0.85
SH3D19-202ENST00000409252 B4DLN1 442 aa9.74□□□□□ -0.85
SH3D19-202ENST00000409252 ZBED4O75132 1171 aa9.74□□□□□ -0.85
SH3D19-202ENST00000409252 BAG4O95429 457 aaKnown RBP9.74□□□□□ -0.85
SH3D19-202ENST00000409252 MRPL12P52815 198 aaKnown RBP9.74□□□□□ -0.85
SH3D19-202ENST00000409252 RSBN1LQ6PCB5 846 aaPredicted RBP9.74□□□□□ -0.85
SH3D19-202ENST00000409252 PI4KBQ9UBF8 816 aa9.74□□□□□ -0.85
SH3D19-202ENST00000409252 SPDYE3A6NKU9 549 aa9.74□□□□□ -0.85
SH3D19-202ENST00000409252 GOLGA6L19H0YKK7 550 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms