RNA–Protein interactions for RNA: ENST00000404744.1

CDPF1-204, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3 BASIC

Gene CDPF1, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-204ENST00000404744 FLT1P17948 1338 aa18.79■□□□□ 0.6
CDPF1-204ENST00000404744 ENTPD3O75355 529 aa18.79■□□□□ 0.6
CDPF1-204ENST00000404744 NPM3O75607 178 aaKnown RBP18.79■□□□□ 0.6
CDPF1-204ENST00000404744 POLR3DP05423 398 aaPredicted RBP18.79■□□□□ 0.6
CDPF1-204ENST00000404744 PTH1RQ03431 593 aa18.79■□□□□ 0.6
CDPF1-204ENST00000404744 NFIAQ12857 509 aa18.79■□□□□ 0.6
CDPF1-204ENST00000404744 ZSCAN29Q8IWY8 852 aaPredicted RBP18.79■□□□□ 0.6
CDPF1-204ENST00000404744 LSG1Q9H089 658 aaKnown RBP18.79■□□□□ 0.6
CDPF1-204ENST00000404744 UPF2Q9HAU5 1272 aaKnown RBP18.79■□□□□ 0.6
CDPF1-204ENST00000404744 MCM9Q9NXL9 1143 aa18.79■□□□□ 0.6
CDPF1-204ENST00000404744 U3KPZ7 1027 aaPredicted RBP18.79■□□□□ 0.6
CDPF1-204ENST00000404744 ASTN2O75129 1339 aaPredicted RBP18.79■□□□□ 0.6
CDPF1-204ENST00000404744 ALX1Q15699 326 aa18.78■□□□□ 0.6
CDPF1-204ENST00000404744 FAM83AQ86UY5 434 aa18.78■□□□□ 0.6
CDPF1-204ENST00000404744 FAM151AQ8WW52 585 aa18.78■□□□□ 0.6
CDPF1-204ENST00000404744 BACH2Q9BYV9 841 aa18.78■□□□□ 0.6
CDPF1-204ENST00000404744 OSBPL5Q9H0X9 879 aaPredicted RBP18.78■□□□□ 0.6
CDPF1-204ENST00000404744 DDX4Q9NQI0 724 aaKnown RBP18.78■□□□□ 0.6
CDPF1-204ENST00000404744 SAP30BPQ9UHR5 308 aaKnown RBP18.78■□□□□ 0.6
CDPF1-204ENST00000404744 PITPNM2Q9BZ72 1349 aa18.78■□□□□ 0.6
CDPF1-204ENST00000404744 FGAP02671 866 aa18.77■□□□□ 0.6
CDPF1-204ENST00000404744 SULF1Q8IWU6 871 aa18.77■□□□□ 0.6
CDPF1-204ENST00000404744 MAP4K1Q92918 833 aa18.77■□□□□ 0.6
CDPF1-204ENST00000404744 ARPP21Q9UBL0 812 aaPredicted RBP18.77■□□□□ 0.6
CDPF1-204ENST00000404744 FAM198AQ9UFP1 575 aa18.77■□□□□ 0.6
CDPF1-204ENST00000404744 EPB41L2O43491 1005 aaKnown RBP18.76■□□□□ 0.59
CDPF1-204ENST00000404744 HLA-DOAP06340 250 aa18.76■□□□□ 0.59
CDPF1-204ENST00000404744 MCCP23508 829 aa18.76■□□□□ 0.59
CDPF1-204ENST00000404744 TTC6Q86TZ1 520 aa18.76■□□□□ 0.59
CDPF1-204ENST00000404744 DHX36Q9H2U1 1008 aaKnown RBP18.76■□□□□ 0.59
CDPF1-204ENST00000404744 EPB41L4AQ9HCS5 686 aaPredicted RBP18.76■□□□□ 0.59
CDPF1-204ENST00000404744 MINDY4BA8MYZ0 360 aa18.75■□□□□ 0.59
CDPF1-204ENST00000404744 USP17L12C9JPN9 530 aa18.75■□□□□ 0.59
CDPF1-204ENST00000404744 USP17L21D6R901 530 aa18.75■□□□□ 0.59
CDPF1-204ENST00000404744 SEC24BO95487 1268 aa18.75■□□□□ 0.59
CDPF1-204ENST00000404744 RASA3Q14644 834 aa18.75■□□□□ 0.59
CDPF1-204ENST00000404744 IMMTQ16891 758 aaKnown RBP18.75■□□□□ 0.59
CDPF1-204ENST00000404744 DEFB129Q9H1M3 183 aa18.75■□□□□ 0.59
CDPF1-204ENST00000404744 MKRN1Q9UHC7 482 aaKnown RBP18.75■□□□□ 0.59
CDPF1-204ENST00000404744 PGAP2Q9UHJ9 254 aa18.75■□□□□ 0.59
CDPF1-204ENST00000404744 RBM8AQ9Y5S9 174 aaKnown RBP18.75■□□□□ 0.59
CDPF1-204ENST00000404744 ECM29Q5VYK3 1845 aa18.75■□□□□ 0.59
CDPF1-204ENST00000404744 ZMYM6O95789 1325 aa18.75■□□□□ 0.59
CDPF1-204ENST00000404744 ZNF213O14771 459 aa18.74■□□□□ 0.59
CDPF1-204ENST00000404744 FOXP2O15409 715 aa18.74■□□□□ 0.59
CDPF1-204ENST00000404744 C1QTNF8P60827 252 aa18.74■□□□□ 0.59
CDPF1-204ENST00000404744 RNF20Q5VTR2 975 aa18.74■□□□□ 0.59
CDPF1-204ENST00000404744 CTR9Q6PD62 1173 aa18.74■□□□□ 0.59
CDPF1-204ENST00000404744 LDHDQ86WU2 507 aa18.74■□□□□ 0.59
CDPF1-204ENST00000404744 PALD1Q9ULE6 856 aa18.74■□□□□ 0.59
CDPF1-204ENST00000404744 SCAF8Q9UPN6 1271 aaKnown RBP18.74■□□□□ 0.59
CDPF1-204ENST00000404744 PPP2R3BQ9Y5P8 575 aa18.74■□□□□ 0.59
CDPF1-204ENST00000404744 SLC3A2P08195 630 aaKnown RBP18.74■□□□□ 0.59
CDPF1-204ENST00000404744 SLC4A8Q2Y0W8 1093 aa18.74■□□□□ 0.59
CDPF1-204ENST00000404744 SBK1Q52WX2 424 aa18.74■□□□□ 0.59
CDPF1-204ENST00000404744 KRT26Q7Z3Y9 468 aa18.74■□□□□ 0.59
CDPF1-204ENST00000404744 ZFPM1Q8IX07 1006 aa18.74■□□□□ 0.59
CDPF1-204ENST00000404744 USP26Q9BXU7 913 aa18.74■□□□□ 0.59
CDPF1-204ENST00000404744 TMEM39BQ9GZU3 492 aa18.74■□□□□ 0.59
CDPF1-204ENST00000404744 CNTNAP1P78357 1384 aa18.73■□□□□ 0.59
CDPF1-204ENST00000404744 CDC37L1Q7L3B6 337 aa18.73■□□□□ 0.59
CDPF1-204ENST00000404744 TRIM34Q9BYJ4 488 aa18.73■□□□□ 0.59
CDPF1-204ENST00000404744 PPARAQ07869 468 aa18.72■□□□□ 0.59
CDPF1-204ENST00000404744 C12orf60Q5U649 245 aa18.72■□□□□ 0.59
CDPF1-204ENST00000404744 USP48Q86UV5 1035 aa18.72■□□□□ 0.59
CDPF1-204ENST00000404744 CRACR2BQ8N4Y2 399 aaPredicted RBP18.72■□□□□ 0.59
CDPF1-204ENST00000404744 HOOK2Q96ED9 719 aa18.72■□□□□ 0.59
CDPF1-204ENST00000404744 CSRNP1Q96S65 589 aa18.72■□□□□ 0.59
CDPF1-204ENST00000404744 PI4KBQ9UBF8 816 aa18.72■□□□□ 0.59
CDPF1-204ENST00000404744 DDTLA6NHG4 134 aaPredicted RBP18.71■□□□□ 0.59
CDPF1-204ENST00000404744 POTEIP0CG38 1075 aa18.71■□□□□ 0.59
CDPF1-204ENST00000404744 POTEJP0CG39 1038 aa18.71■□□□□ 0.59
CDPF1-204ENST00000404744 CYP2D6P10635 497 aa18.71■□□□□ 0.59
CDPF1-204ENST00000404744 ZKSCAN1P17029 563 aaPredicted RBP18.71■□□□□ 0.59
CDPF1-204ENST00000404744 HAND2P61296 217 aa18.71■□□□□ 0.59
CDPF1-204ENST00000404744 NECTIN1Q15223 517 aa18.71■□□□□ 0.59
CDPF1-204ENST00000404744 NAV1Q8NEY1 1877 aa18.71■□□□□ 0.59
CDPF1-204ENST00000404744 CDK5RAP2Q96SN8 1893 aa18.7■□□□□ 0.58
CDPF1-204ENST00000404744 COL2A1P02458 1487 aaPredicted RBP18.7■□□□□ 0.58
CDPF1-204ENST00000404744 FOCADQ5VW36 1801 aa18.7■□□□□ 0.58
CDPF1-204ENST00000404744 CYP2D7A0A087X1C5 515 aa18.7■□□□□ 0.58
CDPF1-204ENST00000404744 PLCD1P51178 756 aa18.7■□□□□ 0.58
CDPF1-204ENST00000404744 SUPT20HL1Q3ZLR7 823 aa18.7■□□□□ 0.58
CDPF1-204ENST00000404744 CREB3L3Q68CJ9 461 aa18.7■□□□□ 0.58
CDPF1-204ENST00000404744 FOXP4Q8IVH2 680 aaPredicted RBP18.7■□□□□ 0.58
CDPF1-204ENST00000404744 ATRNL1Q5VV63 1379 aa18.7■□□□□ 0.58
CDPF1-204ENST00000404744 ADM5C9JUS6 153 aa18.69■□□□□ 0.58
CDPF1-204ENST00000404744 SLC27A2O14975 620 aa18.69■□□□□ 0.58
CDPF1-204ENST00000404744 CTDSPL2Q05D32 466 aa18.69■□□□□ 0.58
CDPF1-204ENST00000404744 MAP1SQ66K74 1059 aaPredicted RBP18.69■□□□□ 0.58
CDPF1-204ENST00000404744 SH3BP5LQ7L8J4 393 aa18.69■□□□□ 0.58
CDPF1-204ENST00000404744 STK11IPQ8N1F8 1099 aa18.69■□□□□ 0.58
CDPF1-204ENST00000404744 ZNF287Q9HBT7 754 aa18.69■□□□□ 0.58
CDPF1-204ENST00000404744 SERPINB13Q9UIV8 391 aa18.69■□□□□ 0.58
CDPF1-204ENST00000404744 MYH1P12882 1939 aa18.69■□□□□ 0.58
CDPF1-204ENST00000404744 CYP21A2P08686 494 aa18.69■□□□□ 0.58
CDPF1-204ENST00000404744 HSPA4P34932 840 aa18.69■□□□□ 0.58
CDPF1-204ENST00000404744 NF2P35240 595 aa18.69■□□□□ 0.58
CDPF1-204ENST00000404744 PDE4BQ07343 736 aa18.69■□□□□ 0.58
CDPF1-204ENST00000404744 PRAMEF18Q5VWM3 479 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms