RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 NSUN4Q96CB9 384 aaKnown RBP18.91■□□□□ 0.62
TPM1-207ENST00000403994 DBNDD2Q9BQY9 259 aa18.91■□□□□ 0.62
TPM1-207ENST00000403994 NOP58Q9Y2X3 529 aaKnown RBP18.91■□□□□ 0.62
TPM1-207ENST00000403994 SIPA1L1O43166 1804 aa18.9■□□□□ 0.62
TPM1-207ENST00000403994 ATAD5Q96QE3 1844 aa18.9■□□□□ 0.62
TPM1-207ENST00000403994 COL2A1P02458 1487 aaPredicted RBP18.9■□□□□ 0.62
TPM1-207ENST00000403994 MKI67P46013 3256 aaKnown RBP18.9■□□□□ 0.62
TPM1-207ENST00000403994 GPR75-ASB3A0A0A6YYF3 556 aa18.9■□□□□ 0.62
TPM1-207ENST00000403994 CETPP11597 493 aa18.9■□□□□ 0.62
TPM1-207ENST00000403994 RHBDL3P58872 404 aa18.9■□□□□ 0.62
TPM1-207ENST00000403994 MLLT1Q03111 559 aaPredicted RBP18.9■□□□□ 0.62
TPM1-207ENST00000403994 SNAPC2Q13487 334 aa18.9■□□□□ 0.62
TPM1-207ENST00000403994 TAF1CQ15572 869 aaPredicted RBP18.9■□□□□ 0.62
TPM1-207ENST00000403994 NOL9Q5SY16 702 aaKnown RBP18.9■□□□□ 0.62
TPM1-207ENST00000403994 SH3BP5LQ7L8J4 393 aa18.9■□□□□ 0.62
TPM1-207ENST00000403994 OTOP1Q7RTM1 612 aa18.9■□□□□ 0.62
TPM1-207ENST00000403994 PDE4DIPQ5VU43 2346 aa18.89■□□□□ 0.61
TPM1-207ENST00000403994 RBBP6Q7Z6E9 1792 aaKnown RBP18.89■□□□□ 0.61
TPM1-207ENST00000403994 PPATQ06203 517 aa18.89■□□□□ 0.61
TPM1-207ENST00000403994 PICALMQ13492 652 aa18.89■□□□□ 0.61
TPM1-207ENST00000403994 TTC39AQ5SRH9 613 aa18.89■□□□□ 0.61
TPM1-207ENST00000403994 CD99L2Q8TCZ2 262 aa18.89■□□□□ 0.61
TPM1-207ENST00000403994 ERO1AQ96HE7 468 aa18.89■□□□□ 0.61
TPM1-207ENST00000403994 TLR7Q9NYK1 1049 aaKnown RBP18.89■□□□□ 0.61
TPM1-207ENST00000403994 RAI14Q9P0K7 980 aa18.89■□□□□ 0.61
TPM1-207ENST00000403994 TRIM17Q9Y577 477 aa18.89■□□□□ 0.61
TPM1-207ENST00000403994 DDTLA6NHG4 134 aaPredicted RBP18.88■□□□□ 0.61
TPM1-207ENST00000403994 GSTO1P78417 241 aa18.88■□□□□ 0.61
TPM1-207ENST00000403994 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.88■□□□□ 0.61
TPM1-207ENST00000403994 ZCCHC17Q9NP64 241 aaKnown RBP18.88■□□□□ 0.61
TPM1-207ENST00000403994 DBNLQ9UJU6 430 aaKnown RBP18.88■□□□□ 0.61
TPM1-207ENST00000403994 BTBD19C9JJ37 291 aa18.87■□□□□ 0.61
TPM1-207ENST00000403994 CAP1Q01518 475 aa18.87■□□□□ 0.61
TPM1-207ENST00000403994 SP3Q02447 781 aa18.87■□□□□ 0.61
TPM1-207ENST00000403994 ZSCAN29Q8IWY8 852 aaPredicted RBP18.87■□□□□ 0.61
TPM1-207ENST00000403994 ZFYVE28Q9HCC9 887 aa18.87■□□□□ 0.61
TPM1-207ENST00000403994 SNRKQ9NRH2 765 aa18.87■□□□□ 0.61
TPM1-207ENST00000403994 KCNH4Q9UQ05 1017 aa18.87■□□□□ 0.61
TPM1-207ENST00000403994 PHF20L1A8MW92 1017 aa18.86■□□□□ 0.61
TPM1-207ENST00000403994 CCDC158Q5M9N0 1113 aa18.86■□□□□ 0.61
TPM1-207ENST00000403994 LRP2BPQ9P2M1 347 aa18.86■□□□□ 0.61
TPM1-207ENST00000403994 NPM3O75607 178 aaKnown RBP18.85■□□□□ 0.61
TPM1-207ENST00000403994 MAP4K4O95819 1239 aaPredicted RBP18.85■□□□□ 0.61
TPM1-207ENST00000403994 LDHCP07864 332 aa18.85■□□□□ 0.61
TPM1-207ENST00000403994 SLURP2P0DP57 97 aa18.85■□□□□ 0.61
TPM1-207ENST00000403994 MAP3K10Q02779 954 aa18.85■□□□□ 0.61
TPM1-207ENST00000403994 SCYL3Q8IZE3 742 aa18.85■□□□□ 0.61
TPM1-207ENST00000403994 ZNF512BQ96KM6 892 aaPredicted RBP18.85■□□□□ 0.61
TPM1-207ENST00000403994 EXOC6BQ9Y2D4 811 aa18.85■□□□□ 0.61
TPM1-207ENST00000403994 LOC285556D6RIA3 1793 aa18.84■□□□□ 0.61
TPM1-207ENST00000403994 CYP2E1P05181 493 aaPredicted RBP18.84■□□□□ 0.61
TPM1-207ENST00000403994 MS4A1P11836 297 aa18.84■□□□□ 0.61
TPM1-207ENST00000403994 MOGSQ13724 837 aa18.84■□□□□ 0.61
TPM1-207ENST00000403994 EAF2Q96CJ1 260 aaPredicted RBP18.84■□□□□ 0.61
TPM1-207ENST00000403994 EFCC1Q9HA90 598 aa18.84■□□□□ 0.61
TPM1-207ENST00000403994 TLR2O60603 784 aa18.83■□□□□ 0.6
TPM1-207ENST00000403994 ZAP70P43403 619 aa18.83■□□□□ 0.6
TPM1-207ENST00000403994 NAA16Q6N069 864 aaPredicted RBP18.83■□□□□ 0.6
TPM1-207ENST00000403994 ANKRD23Q86SG2 305 aa18.83■□□□□ 0.6
TPM1-207ENST00000403994 CCDC8Q9H0W5 538 aaPredicted RBP18.83■□□□□ 0.6
TPM1-207ENST00000403994 OSBPL5Q9H0X9 879 aaPredicted RBP18.83■□□□□ 0.6
TPM1-207ENST00000403994 PTPN22Q9Y2R2 807 aa18.83■□□□□ 0.6
TPM1-207ENST00000403994 DDX60LQ5H9U9 1706 aaKnown RBP18.83■□□□□ 0.6
TPM1-207ENST00000403994 ADGRA2Q96PE1 1338 aa18.82■□□□□ 0.6
TPM1-207ENST00000403994 PTPRAP18433 802 aa18.82■□□□□ 0.6
TPM1-207ENST00000403994 ADGRA1Q86SQ6 560 aa18.82■□□□□ 0.6
TPM1-207ENST00000403994 ERC1Q8IUD2 1116 aa18.82■□□□□ 0.6
TPM1-207ENST00000403994 TEX11Q8IYF3 940 aa18.82■□□□□ 0.6
TPM1-207ENST00000403994 SH3RF3Q8TEJ3 882 aaPredicted RBP18.82■□□□□ 0.6
TPM1-207ENST00000403994 PIH1D3Q9NQM4 214 aaKnown RBP18.82■□□□□ 0.6
TPM1-207ENST00000403994 PICK1Q9NRD5 415 aa18.82■□□□□ 0.6
TPM1-207ENST00000403994 RCAN3Q9UKA8 241 aa18.82■□□□□ 0.6
TPM1-207ENST00000403994 COG6Q9Y2V7 657 aa18.82■□□□□ 0.6
TPM1-207ENST00000403994 FAM196BA6NMK8 535 aa18.81■□□□□ 0.6
TPM1-207ENST00000403994 NOL10Q9BSC4 688 aaKnown RBP18.81■□□□□ 0.6
TPM1-207ENST00000403994 AATFQ9NY61 560 aaKnown RBP eCLIP18.81■□□□□ 0.6
TPM1-207ENST00000403994 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.81■□□□□ 0.6
TPM1-207ENST00000403994 DDX19BQ9UMR2 479 aa18.81■□□□□ 0.6
TPM1-207ENST00000403994 MGAMO43451 1857 aa18.8■□□□□ 0.6
TPM1-207ENST00000403994 A0A0G2JLL6 359 aaPredicted RBP18.8■□□□□ 0.6
TPM1-207ENST00000403994 PDHXO00330 501 aa18.8■□□□□ 0.6
TPM1-207ENST00000403994 CTNND1O60716 968 aaKnown RBP18.8■□□□□ 0.6
TPM1-207ENST00000403994 PRRT2Q7Z6L0 340 aaPredicted RBP18.8■□□□□ 0.6
TPM1-207ENST00000403994 AACSQ86V21 672 aa18.8■□□□□ 0.6
TPM1-207ENST00000403994 ARHGAP39Q9C0H5 1083 aa18.8■□□□□ 0.6
TPM1-207ENST00000403994 ZBTB40Q9NUA8 1239 aa18.8■□□□□ 0.6
TPM1-207ENST00000403994 ZHX2Q9Y6X8 837 aa18.8■□□□□ 0.6
TPM1-207ENST00000403994 MYH1P12882 1939 aa18.8■□□□□ 0.6
TPM1-207ENST00000403994 KIAA0100Q14667 2235 aaKnown RBP18.8■□□□□ 0.6
TPM1-207ENST00000403994 FLT1P17948 1338 aa18.79■□□□□ 0.6
TPM1-207ENST00000403994 CXCL11O14625 94 aa18.79■□□□□ 0.6
TPM1-207ENST00000403994 TBC1D12O60347 775 aa18.79■□□□□ 0.6
TPM1-207ENST00000403994 PLCG2P16885 1265 aa18.79■□□□□ 0.6
TPM1-207ENST00000403994 LACTBP83111 547 aaPredicted RBP18.79■□□□□ 0.6
TPM1-207ENST00000403994 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.79■□□□□ 0.6
TPM1-207ENST00000403994 NDUFB9Q9Y6M9 179 aa18.79■□□□□ 0.6
TPM1-207ENST00000403994 NAV1Q8NEY1 1877 aa18.79■□□□□ 0.6
TPM1-207ENST00000403994 IGSF3O75054 1194 aa18.78■□□□□ 0.6
TPM1-207ENST00000403994 BAG3O95817 575 aa18.78■□□□□ 0.6
TPM1-207ENST00000403994 HSP90AB4PQ58FF6 505 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms