RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 NEURL1BA8MQ27 555 aa11.86□□□□□ -0.51
NUP43-204ENST00000403890 SYN1P17600 705 aa11.86□□□□□ -0.51
NUP43-204ENST00000403890 CWF19L2Q2TBE0 894 aaKnown RBP11.86□□□□□ -0.51
NUP43-204ENST00000403890 CCDC30Q5VVM6 783 aa11.86□□□□□ -0.51
NUP43-204ENST00000403890 DCAF15Q66K64 600 aa11.86□□□□□ -0.51
NUP43-204ENST00000403890 CCDC146Q8IYE0 955 aa11.86□□□□□ -0.51
NUP43-204ENST00000403890 DIS3LQ8TF46 1054 aaKnown RBP11.86□□□□□ -0.51
NUP43-204ENST00000403890 PARK7Q99497 189 aaKnown RBP11.86□□□□□ -0.51
NUP43-204ENST00000403890 KCNH4Q9UQ05 1017 aa11.86□□□□□ -0.51
NUP43-204ENST00000403890 MYH3P11055 1940 aa11.86□□□□□ -0.51
NUP43-204ENST00000403890 IRF5Q13568 498 aa11.85□□□□□ -0.51
NUP43-204ENST00000403890 FAM109BQ6ICB4 259 aaPredicted RBP11.85□□□□□ -0.51
NUP43-204ENST00000403890 ANKLE1Q8NAG6 615 aa11.85□□□□□ -0.51
NUP43-204ENST00000403890 TDRD7Q8NHU6 1098 aaKnown RBP11.85□□□□□ -0.51
NUP43-204ENST00000403890 ZNF853P0CG23 659 aa11.84□□□□□ -0.51
NUP43-204ENST00000403890 CYP2C8P10632 490 aa11.84□□□□□ -0.51
NUP43-204ENST00000403890 CACNB3P54284 484 aa11.84□□□□□ -0.51
NUP43-204ENST00000403890 MOGSQ13724 837 aa11.84□□□□□ -0.51
NUP43-204ENST00000403890 FAM83AQ86UY5 434 aa11.84□□□□□ -0.51
NUP43-204ENST00000403890 RUNDC1Q96C34 613 aa11.84□□□□□ -0.51
NUP43-204ENST00000403890 GUCD1Q96NT3 240 aa11.84□□□□□ -0.51
NUP43-204ENST00000403890 ZNF341Q9BYN7 854 aa11.84□□□□□ -0.51
NUP43-204ENST00000403890 NBPF3Q9H094 633 aa11.84□□□□□ -0.51
NUP43-204ENST00000403890 TMOD2Q9NZR1 351 aa11.84□□□□□ -0.51
NUP43-204ENST00000403890 TNPO2O14787 897 aaKnown RBP11.83□□□□□ -0.52
NUP43-204ENST00000403890 PLIN1O60240 522 aa11.83□□□□□ -0.52
NUP43-204ENST00000403890 INPP5BP32019 993 aa11.83□□□□□ -0.52
NUP43-204ENST00000403890 HDLBPQ00341 1268 aaKnown RBP11.83□□□□□ -0.52
NUP43-204ENST00000403890 IFIT5Q13325 482 aaKnown RBP11.83□□□□□ -0.52
NUP43-204ENST00000403890 GCKRQ14397 625 aa11.83□□□□□ -0.52
NUP43-204ENST00000403890 FKBP1CQ5VVH2 108 aa11.83□□□□□ -0.52
NUP43-204ENST00000403890 MIGA2Q7L4E1 593 aa11.83□□□□□ -0.52
NUP43-204ENST00000403890 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.83□□□□□ -0.52
NUP43-204ENST00000403890 ALPK3Q96L96 1907 aa11.82□□□□□ -0.52
NUP43-204ENST00000403890 CXCL11O14625 94 aa11.82□□□□□ -0.52
NUP43-204ENST00000403890 HIBADHP31937 336 aaKnown RBP11.82□□□□□ -0.52
NUP43-204ENST00000403890 CASP7P55210 303 aa11.82□□□□□ -0.52
NUP43-204ENST00000403890 GPAT2Q6NUI2 795 aa11.82□□□□□ -0.52
NUP43-204ENST00000403890 C8orf58Q8NAV2 365 aa11.82□□□□□ -0.52
NUP43-204ENST00000403890 ARAP2Q8WZ64 1704 aa11.82□□□□□ -0.52
NUP43-204ENST00000403890 COL9A1P20849 921 aa11.81□□□□□ -0.52
NUP43-204ENST00000403890 GNAI1P63096 354 aa11.81□□□□□ -0.52
NUP43-204ENST00000403890 TEKT1Q969V4 418 aa11.81□□□□□ -0.52
NUP43-204ENST00000403890 COA7Q96BR5 231 aa11.81□□□□□ -0.52
NUP43-204ENST00000403890 FAM161BQ96MY7 647 aa11.81□□□□□ -0.52
NUP43-204ENST00000403890 MRIQ9BWK5 157 aa11.81□□□□□ -0.52
NUP43-204ENST00000403890 C11orf49Q9H6J7 331 aa11.81□□□□□ -0.52
NUP43-204ENST00000403890 IFT57Q9NWB7 429 aa11.81□□□□□ -0.52
NUP43-204ENST00000403890 ZNF112Q9UJU3 913 aa11.81□□□□□ -0.52
NUP43-204ENST00000403890 GYG1P46976 350 aa11.8□□□□□ -0.52
NUP43-204ENST00000403890 GRIK5Q16478 980 aa11.8□□□□□ -0.52
NUP43-204ENST00000403890 LDHAL6AQ6ZMR3 332 aa11.8□□□□□ -0.52
NUP43-204ENST00000403890 FASTKD5Q7L8L6 764 aaKnown RBP11.8□□□□□ -0.52
NUP43-204ENST00000403890 SYMPKQ92797 1274 aaKnown RBP11.8□□□□□ -0.52
NUP43-204ENST00000403890 FAM84BQ96KN1 310 aaPredicted RBP11.8□□□□□ -0.52
NUP43-204ENST00000403890 ZDHHC15Q96MV8 337 aa11.8□□□□□ -0.52
NUP43-204ENST00000403890 STK31Q9BXU1 1019 aa11.8□□□□□ -0.52
NUP43-204ENST00000403890 MYH16Q9H6N6 1097 aa11.8□□□□□ -0.52
NUP43-204ENST00000403890 CHMP3Q9Y3E7 222 aa11.8□□□□□ -0.52
NUP43-204ENST00000403890 SPTBN5Q9NRC6 3674 aaKnown RBP11.8□□□□□ -0.52
NUP43-204ENST00000403890 CALD1Q05682 793 aaKnown RBP11.79□□□□□ -0.52
NUP43-204ENST00000403890 UBE4AQ14139 1066 aa11.79□□□□□ -0.52
NUP43-204ENST00000403890 NOL9Q5SY16 702 aaKnown RBP11.79□□□□□ -0.52
NUP43-204ENST00000403890 APOBEC3HQ6NTF7 200 aaKnown RBP11.79□□□□□ -0.52
NUP43-204ENST00000403890 TBC1D22AQ8WUA7 517 aa11.79□□□□□ -0.52
NUP43-204ENST00000403890 HMX1Q9NP08 348 aaPredicted RBP11.79□□□□□ -0.52
NUP43-204ENST00000403890 CNNM1Q9NRU3 951 aa11.79□□□□□ -0.52
NUP43-204ENST00000403890 MGAMO43451 1857 aa11.78□□□□□ -0.52
NUP43-204ENST00000403890 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.78□□□□□ -0.52
NUP43-204ENST00000403890 HMGCRP04035 888 aa11.78□□□□□ -0.52
NUP43-204ENST00000403890 FOXO4P98177 505 aa11.78□□□□□ -0.52
NUP43-204ENST00000403890 MDM2Q00987 491 aaPredicted RBP11.78□□□□□ -0.52
NUP43-204ENST00000403890 CCDC57Q2TAC2 916 aa11.78□□□□□ -0.52
NUP43-204ENST00000403890 TAF7LQ5H9L4 462 aa11.78□□□□□ -0.52
NUP43-204ENST00000403890 ZNF697Q5TEC3 545 aa11.78□□□□□ -0.52
NUP43-204ENST00000403890 MAFAQ8NHW3 353 aaPredicted RBP11.78□□□□□ -0.52
NUP43-204ENST00000403890 SMCR8Q8TEV9 937 aaPredicted RBP11.78□□□□□ -0.52
NUP43-204ENST00000403890 FAM151AQ8WW52 585 aa11.78□□□□□ -0.52
NUP43-204ENST00000403890 ZFP91Q96JP5 570 aaPredicted RBP11.78□□□□□ -0.52
NUP43-204ENST00000403890 SLC45A1Q9Y2W3 748 aa11.78□□□□□ -0.52
NUP43-204ENST00000403890 RPAP1Q9BWH6 1393 aaPredicted RBP11.78□□□□□ -0.52
NUP43-204ENST00000403890 FRAT2O75474 233 aaPredicted RBP11.77□□□□□ -0.53
NUP43-204ENST00000403890 CHAF1AQ13111 956 aaPredicted RBP11.77□□□□□ -0.53
NUP43-204ENST00000403890 VPS37DQ86XT2 251 aa11.77□□□□□ -0.53
NUP43-204ENST00000403890 TSPYL6Q8N831 410 aa11.77□□□□□ -0.53
NUP43-204ENST00000403890 LINS1Q8NG48 757 aa11.77□□□□□ -0.53
NUP43-204ENST00000403890 ZNF594Q96JF6 807 aaPredicted RBP11.77□□□□□ -0.53
NUP43-204ENST00000403890 CDX2Q99626 313 aaPredicted RBP11.77□□□□□ -0.53
NUP43-204ENST00000403890 OGDHLQ9ULD0 1010 aa11.77□□□□□ -0.53
NUP43-204ENST00000403890 DOCK3Q8IZD9 2030 aa11.76□□□□□ -0.53
NUP43-204ENST00000403890 A0A0G2JLL6 359 aaPredicted RBP11.76□□□□□ -0.53
NUP43-204ENST00000403890 WDR43Q15061 677 aaKnown RBP eCLIP11.76□□□□□ -0.53
NUP43-204ENST00000403890 VARS2Q5ST30 1063 aaKnown RBP11.76□□□□□ -0.53
NUP43-204ENST00000403890 HHIPL2Q6UWX4 724 aa11.76□□□□□ -0.53
NUP43-204ENST00000403890 LMBR1LQ6UX01 489 aa11.76□□□□□ -0.53
NUP43-204ENST00000403890 GADL1Q6ZQY3 521 aa11.76□□□□□ -0.53
NUP43-204ENST00000403890 G2E3Q7L622 706 aa11.76□□□□□ -0.53
NUP43-204ENST00000403890 PRRT2Q7Z6L0 340 aaPredicted RBP11.76□□□□□ -0.53
NUP43-204ENST00000403890 ANKRD13CQ8N6S4 541 aa11.76□□□□□ -0.53
NUP43-204ENST00000403890 PICK1Q9NRD5 415 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms