RNA–Protein interactions for RNA: ENST00000403663.6

TRIOBP-203, Transcript of TRIO and F-actin binding protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIOBP, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-203ENST00000403663 RBM8AQ9Y5S9 174 aaKnown RBP27.42■■□□□ 1.98
TRIOBP-203ENST00000403663 PDS5AQ29RF7 1337 aaKnown RBP27.42■■□□□ 1.98
TRIOBP-203ENST00000403663 VPS37CA5D8V6 355 aaPredicted RBP27.41■■□□□ 1.98
TRIOBP-203ENST00000403663 FOXP2O15409 715 aa27.41■■□□□ 1.98
TRIOBP-203ENST00000403663 GABPB1Q06547 395 aaPredicted RBP27.41■■□□□ 1.98
TRIOBP-203ENST00000403663 LRRFIP1Q32MZ4 808 aaKnown RBP27.41■■□□□ 1.98
TRIOBP-203ENST00000403663 TAF3Q5VWG9 929 aa27.41■■□□□ 1.98
TRIOBP-203ENST00000403663 ZNF771Q7L3S4 317 aaPredicted RBP27.41■■□□□ 1.98
TRIOBP-203ENST00000403663 TNNT1P13805 278 aa27.41■■□□□ 1.98
TRIOBP-203ENST00000403663 CAMK4Q16566 473 aa27.41■■□□□ 1.98
TRIOBP-203ENST00000403663 ZSCAN25Q6NSZ9 544 aa27.41■■□□□ 1.98
TRIOBP-203ENST00000403663 CGNQ9P2M7 1197 aaKnown RBP27.41■■□□□ 1.98
TRIOBP-203ENST00000403663 NRBP1Q9UHY1 535 aa27.41■■□□□ 1.98
TRIOBP-203ENST00000403663 LIG1P18858 919 aa27.4■■□□□ 1.98
TRIOBP-203ENST00000403663 ST3GAL1Q11201 340 aa27.4■■□□□ 1.98
TRIOBP-203ENST00000403663 CBX8Q9HC52 389 aa27.4■■□□□ 1.98
TRIOBP-203ENST00000403663 PAXBP1Q9Y5B6 917 aa27.4■■□□□ 1.98
TRIOBP-203ENST00000403663 TAF6LQ9Y6J9 622 aa27.4■■□□□ 1.98
TRIOBP-203ENST00000403663 CCDC88AQ3V6T2 1871 aa27.4■■□□□ 1.98
TRIOBP-203ENST00000403663 GPAA1O43292 621 aa27.39■■□□□ 1.98
TRIOBP-203ENST00000403663 NAA30Q147X3 362 aaPredicted RBP27.39■■□□□ 1.98
TRIOBP-203ENST00000403663 PLA2G4DQ86XP0 818 aa27.39■■□□□ 1.98
TRIOBP-203ENST00000403663 ZSCAN31Q96LW9 406 aaPredicted RBP27.39■■□□□ 1.98
TRIOBP-203ENST00000403663 SH2B1Q9NRF2 756 aaPredicted RBP27.39■■□□□ 1.98
TRIOBP-203ENST00000403663 NECTIN1Q15223 517 aa27.39■■□□□ 1.97
TRIOBP-203ENST00000403663 RTFDC1Q9BY42 306 aaPredicted RBP27.39■■□□□ 1.97
TRIOBP-203ENST00000403663 PDRG1Q9NUG6 133 aa27.39■■□□□ 1.97
TRIOBP-203ENST00000403663 PIM2Q9P1W9 311 aa27.39■■□□□ 1.97
TRIOBP-203ENST00000403663 SCN9AQ15858 1988 aa27.38■■□□□ 1.97
TRIOBP-203ENST00000403663 DRC7Q8IY82 874 aa27.38■■□□□ 1.97
TRIOBP-203ENST00000403663 NLGN2Q8NFZ4 835 aa27.38■■□□□ 1.97
TRIOBP-203ENST00000403663 DBNDD1Q9H9R9 158 aa27.38■■□□□ 1.97
TRIOBP-203ENST00000403663 ELP1O95163 1332 aa27.38■■□□□ 1.97
TRIOBP-203ENST00000403663 HSPD1P10809 573 aaKnown RBP27.38■■□□□ 1.97
TRIOBP-203ENST00000403663 ZNF75DP51815 510 aa27.38■■□□□ 1.97
TRIOBP-203ENST00000403663 KRT85P78386 507 aa27.38■■□□□ 1.97
TRIOBP-203ENST00000403663 ANO6Q4KMQ2 910 aa27.38■■□□□ 1.97
TRIOBP-203ENST00000403663 MIGA1Q8NAN2 632 aa27.38■■□□□ 1.97
TRIOBP-203ENST00000403663 ZBTB22O15209 634 aa27.37■■□□□ 1.97
TRIOBP-203ENST00000403663 MECOMQ03112 1051 aa27.37■■□□□ 1.97
TRIOBP-203ENST00000403663 ADCK5Q3MIX3 580 aa27.37■■□□□ 1.97
TRIOBP-203ENST00000403663 ARHGAP30Q7Z6I6 1101 aaPredicted RBP27.37■■□□□ 1.97
TRIOBP-203ENST00000403663 CCDC112Q8NEF3 446 aa27.37■■□□□ 1.97
TRIOBP-203ENST00000403663 KCNQ5Q9NR82 932 aa27.37■■□□□ 1.97
TRIOBP-203ENST00000403663 MORC2Q9Y6X9 1032 aaPredicted RBP27.37■■□□□ 1.97
TRIOBP-203ENST00000403663 CYP7A1P22680 504 aa27.36■■□□□ 1.97
TRIOBP-203ENST00000403663 FGD1P98174 961 aa27.36■■□□□ 1.97
TRIOBP-203ENST00000403663 AOC3Q16853 763 aa27.36■■□□□ 1.97
TRIOBP-203ENST00000403663 NSUN4Q96CB9 384 aaKnown RBP27.36■■□□□ 1.97
TRIOBP-203ENST00000403663 COA1Q9GZY4 146 aa27.36■■□□□ 1.97
TRIOBP-203ENST00000403663 CD2APQ9Y5K6 639 aa27.36■■□□□ 1.97
TRIOBP-203ENST00000403663 CKAP2LQ8IYA6 745 aa27.36■■□□□ 1.97
TRIOBP-203ENST00000403663 JAKMIP1Q96N16 626 aaKnown RBP27.36■■□□□ 1.97
TRIOBP-203ENST00000403663 TRIM5Q9C035 493 aa27.36■■□□□ 1.97
TRIOBP-203ENST00000403663 ZSWIM6Q9HCJ5 1215 aa27.36■■□□□ 1.97
TRIOBP-203ENST00000403663 SLFN14P0C7P3 912 aa27.35■■□□□ 1.97
TRIOBP-203ENST00000403663 GTF2IP78347 998 aa27.35■■□□□ 1.97
TRIOBP-203ENST00000403663 ME3Q16798 604 aa27.35■■□□□ 1.97
TRIOBP-203ENST00000403663 TNMDQ9H2S6 317 aa27.35■■□□□ 1.97
TRIOBP-203ENST00000403663 MAST2Q6P0Q8 1798 aa27.35■■□□□ 1.97
TRIOBP-203ENST00000403663 MBD4O95243 580 aa27.35■■□□□ 1.97
TRIOBP-203ENST00000403663 CREB3L3Q68CJ9 461 aa27.35■■□□□ 1.97
TRIOBP-203ENST00000403663 WDR66Q8TBY9 1149 aa27.35■■□□□ 1.97
TRIOBP-203ENST00000403663 EYA3Q99504 573 aa27.35■■□□□ 1.97
TRIOBP-203ENST00000403663 ARMT1Q9H993 441 aa27.35■■□□□ 1.97
TRIOBP-203ENST00000403663 SALL1Q9NSC2 1324 aa27.35■■□□□ 1.97
TRIOBP-203ENST00000403663 COL9A3Q14050 684 aaPredicted RBP27.34■■□□□ 1.97
TRIOBP-203ENST00000403663 CCDC93Q567U6 631 aa27.34■■□□□ 1.97
TRIOBP-203ENST00000403663 KIF18AQ8NI77 898 aa27.34■■□□□ 1.97
TRIOBP-203ENST00000403663 MXD3Q9BW11 206 aa27.34■■□□□ 1.97
TRIOBP-203ENST00000403663 SPON1Q9HCB6 807 aa27.34■■□□□ 1.97
TRIOBP-203ENST00000403663 DACT1Q9NYF0 836 aa27.34■■□□□ 1.97
TRIOBP-203ENST00000403663 CC2D2BQ6DHV5 1058 aa27.34■■□□□ 1.97
TRIOBP-203ENST00000403663 LCORLQ8N3X6 602 aa27.34■■□□□ 1.97
TRIOBP-203ENST00000403663 TM6SF1Q9BZW5 370 aa27.34■■□□□ 1.97
TRIOBP-203ENST00000403663 SLC27A2O14975 620 aa27.33■■□□□ 1.97
TRIOBP-203ENST00000403663 NAA16Q6N069 864 aaPredicted RBP27.33■■□□□ 1.97
TRIOBP-203ENST00000403663 RBM43Q6ZSC3 357 aaKnown RBP27.33■■□□□ 1.97
TRIOBP-203ENST00000403663 CACTINQ8WUQ7 758 aaKnown RBP27.33■■□□□ 1.97
TRIOBP-203ENST00000403663 CYP46A1Q9Y6A2 500 aa27.33■■□□□ 1.97
TRIOBP-203ENST00000403663 DALRD3Q5D0E6 543 aaKnown RBP27.33■■□□□ 1.97
TRIOBP-203ENST00000403663 LARP1BQ659C4 914 aaKnown RBP27.33■■□□□ 1.97
TRIOBP-203ENST00000403663 TTLL5Q6EMB2 1281 aa27.33■■□□□ 1.97
TRIOBP-203ENST00000403663 FAM173BQ6P4H8 233 aa27.33■■□□□ 1.97
TRIOBP-203ENST00000403663 CDC37L1Q7L3B6 337 aa27.33■■□□□ 1.97
TRIOBP-203ENST00000403663 NECAB1Q8N987 351 aa27.33■■□□□ 1.97
TRIOBP-203ENST00000403663 FBXW7Q969H0 707 aa27.33■■□□□ 1.97
TRIOBP-203ENST00000403663 STRBPQ96SI9 672 aaKnown RBP27.33■■□□□ 1.97
TRIOBP-203ENST00000403663 COL4A5P29400 1685 aa27.32■■□□□ 1.96
TRIOBP-203ENST00000403663 TPD52L1Q16890 204 aaPredicted RBP27.32■■□□□ 1.96
TRIOBP-203ENST00000403663 AIDAQ96BJ3 306 aa27.32■■□□□ 1.96
TRIOBP-203ENST00000403663 DSCC1Q9BVC3 393 aa27.32■■□□□ 1.96
TRIOBP-203ENST00000403663 ZNF646O15015 1829 aaPredicted RBP27.32■■□□□ 1.96
TRIOBP-203ENST00000403663 MFSD14BQ5SR56 506 aa27.32■■□□□ 1.96
TRIOBP-203ENST00000403663 FERMT3Q86UX7 667 aa27.32■■□□□ 1.96
TRIOBP-203ENST00000403663 KCNB2Q92953 911 aa27.32■■□□□ 1.96
TRIOBP-203ENST00000403663 MYH2Q9UKX2 1941 aa27.31■■□□□ 1.96
TRIOBP-203ENST00000403663 PRKAB2O43741 272 aa27.31■■□□□ 1.96
TRIOBP-203ENST00000403663 DYNLL1P63167 89 aaKnown RBP27.31■■□□□ 1.96
TRIOBP-203ENST00000403663 DIXDC1Q155Q3 683 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms