RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 ZNF165P49910 485 aa5.95□□□□□ -1.46
HMGB1P17-201ENST00000403495 BMS1Q14692 1282 aaKnown RBP5.95□□□□□ -1.46
HMGB1P17-201ENST00000403495 AKAP4Q5JQC9 854 aa5.95□□□□□ -1.46
HMGB1P17-201ENST00000403495 GIMAP6Q6P9H5 292 aa5.95□□□□□ -1.46
HMGB1P17-201ENST00000403495 TREML4Q6UXN2 200 aa5.95□□□□□ -1.46
HMGB1P17-201ENST00000403495 LINC00114Q6XXX2 140 aa5.95□□□□□ -1.46
HMGB1P17-201ENST00000403495 SPATA32Q96LK8 384 aa5.95□□□□□ -1.46
HMGB1P17-201ENST00000403495 PLVAPQ9BX97 442 aa5.95□□□□□ -1.46
HMGB1P17-201ENST00000403495 ZSWIM4Q9H7M6 989 aa5.95□□□□□ -1.46
HMGB1P17-201ENST00000403495 ROBO2Q9HCK4 1378 aa5.94□□□□□ -1.46
HMGB1P17-201ENST00000403495 GFRA2O00451 464 aa5.94□□□□□ -1.46
HMGB1P17-201ENST00000403495 SMARCA5O60264 1052 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P17-201ENST00000403495 AOC2O75106 756 aa5.94□□□□□ -1.46
HMGB1P17-201ENST00000403495 EIF6P56537 245 aaKnown RBP5.94□□□□□ -1.46
HMGB1P17-201ENST00000403495 COL9A2Q14055 689 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P17-201ENST00000403495 DUOXA2Q1HG44 320 aa5.94□□□□□ -1.46
HMGB1P17-201ENST00000403495 PPM1JQ5JR12 505 aa5.94□□□□□ -1.46
HMGB1P17-201ENST00000403495 SHISA2Q6UWI4 295 aa5.94□□□□□ -1.46
HMGB1P17-201ENST00000403495 ACAD11Q709F0 780 aa5.94□□□□□ -1.46
HMGB1P17-201ENST00000403495 CKAP2LQ8IYA6 745 aa5.94□□□□□ -1.46
HMGB1P17-201ENST00000403495 FMR1NBQ8N0W7 255 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P17-201ENST00000403495 AGGF1Q8N302 714 aaeCLIP5.94□□□□□ -1.46
HMGB1P17-201ENST00000403495 ELMO3Q96BJ8 720 aa5.94□□□□□ -1.46
HMGB1P17-201ENST00000403495 ARMC5Q96C12 935 aa5.94□□□□□ -1.46
HMGB1P17-201ENST00000403495 HIRIP3Q9BW71 556 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P17-201ENST00000403495 RAD18Q9NS91 495 aa5.94□□□□□ -1.46
HMGB1P17-201ENST00000403495 KRT82Q9NSB4 513 aa5.94□□□□□ -1.46
HMGB1P17-201ENST00000403495 PPP1R9AQ9ULJ8 1098 aa5.94□□□□□ -1.46
HMGB1P17-201ENST00000403495 FAM86C2PA6NEL3 165 aa5.93□□□□□ -1.46
HMGB1P17-201ENST00000403495 CCDC85CA6NKD9 419 aa5.93□□□□□ -1.46
HMGB1P17-201ENST00000403495 DNAJA2O60884 412 aa5.93□□□□□ -1.46
HMGB1P17-201ENST00000403495 ARHGEF15O94989 841 aa5.93□□□□□ -1.46
HMGB1P17-201ENST00000403495 HTR3BO95264 441 aa5.93□□□□□ -1.46
HMGB1P17-201ENST00000403495 KIF4BQ2VIQ3 1234 aa5.93□□□□□ -1.46
HMGB1P17-201ENST00000403495 LSRQ86X29 649 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P17-201ENST00000403495 FBXO11Q86XK2 927 aa5.93□□□□□ -1.46
HMGB1P17-201ENST00000403495 CRBNQ96SW2 442 aa5.93□□□□□ -1.46
HMGB1P17-201ENST00000403495 TNKS2Q9H2K2 1166 aa5.93□□□□□ -1.46
HMGB1P17-201ENST00000403495 ST7Q9NRC1 585 aa5.93□□□□□ -1.46
HMGB1P17-201ENST00000403495 LRRC4BQ9NT99 713 aa5.93□□□□□ -1.46
HMGB1P17-201ENST00000403495 ZNRF3Q9ULT6 936 aa5.93□□□□□ -1.46
HMGB1P17-201ENST00000403495 PCDHGC5Q9Y5F6 944 aa5.93□□□□□ -1.46
HMGB1P17-201ENST00000403495 RBAK-RBAKDNI3L0D1 243 aa5.92□□□□□ -1.46
HMGB1P17-201ENST00000403495 KLF4O43474 513 aa5.92□□□□□ -1.46
HMGB1P17-201ENST00000403495 ALX3O95076 343 aa5.92□□□□□ -1.46
HMGB1P17-201ENST00000403495 DRD2P14416 443 aa5.92□□□□□ -1.46
HMGB1P17-201ENST00000403495 GRK4P32298 578 aa5.92□□□□□ -1.46
HMGB1P17-201ENST00000403495 GIPRP48546 466 aa5.92□□□□□ -1.46
HMGB1P17-201ENST00000403495 RAC1P63000 192 aa5.92□□□□□ -1.46
HMGB1P17-201ENST00000403495 GRIK4Q16099 956 aa5.92□□□□□ -1.46
HMGB1P17-201ENST00000403495 ZC3H12AQ5D1E8 599 aaKnown RBP5.92□□□□□ -1.46
HMGB1P17-201ENST00000403495 KIAA1211Q6ZU35 1233 aa5.92□□□□□ -1.46
HMGB1P17-201ENST00000403495 HDXQ7Z353 690 aa5.92□□□□□ -1.46
HMGB1P17-201ENST00000403495 UBE3DQ7Z6J8 389 aa5.92□□□□□ -1.46
HMGB1P17-201ENST00000403495 CELF2-AS1Q8N7Q2 184 aa5.92□□□□□ -1.46
HMGB1P17-201ENST00000403495 RUSC1Q9BVN2 902 aa5.92□□□□□ -1.46
HMGB1P17-201ENST00000403495 OSBPL2Q9H1P3 480 aa5.92□□□□□ -1.46
HMGB1P17-201ENST00000403495 EHMT1Q9H9B1 1298 aa5.92□□□□□ -1.46
HMGB1P17-201ENST00000403495 REV1Q9UBZ9 1251 aa5.92□□□□□ -1.46
HMGB1P17-201ENST00000403495 PRKAG3Q9UGI9 489 aa5.92□□□□□ -1.46
HMGB1P17-201ENST00000403495 KLHL3Q9UH77 587 aa5.92□□□□□ -1.46
HMGB1P17-201ENST00000403495 STRIP2Q9ULQ0 834 aa5.92□□□□□ -1.46
HMGB1P17-201ENST00000403495 AP4E1Q9UPM8 1137 aa5.92□□□□□ -1.46
HMGB1P17-201ENST00000403495 HIF3AQ9Y2N7 669 aa5.92□□□□□ -1.46
HMGB1P17-201ENST00000403495 CNTNAP5Q8WYK1 1306 aa5.92□□□□□ -1.46
HMGB1P17-201ENST00000403495 UPK3BL1B0FP48 263 aa5.91□□□□□ -1.46
HMGB1P17-201ENST00000403495 UPK3BL2E5RIL1 263 aa5.91□□□□□ -1.46
HMGB1P17-201ENST00000403495 TMPRSS2O15393 492 aa5.91□□□□□ -1.46
HMGB1P17-201ENST00000403495 PLCG1P19174 1290 aa5.91□□□□□ -1.46
HMGB1P17-201ENST00000403495 PPP2R5EQ16537 467 aa5.91□□□□□ -1.46
HMGB1P17-201ENST00000403495 CYFIP1Q7L576 1253 aa5.91□□□□□ -1.46
HMGB1P17-201ENST00000403495 MAP4K3Q8IVH8 894 aa5.91□□□□□ -1.46
HMGB1P17-201ENST00000403495 REXO1Q8N1G1 1221 aaKnown RBP5.91□□□□□ -1.46
HMGB1P17-201ENST00000403495 MICAL1Q8TDZ2 1067 aa5.91□□□□□ -1.46
HMGB1P17-201ENST00000403495 TRIM55Q9BYV6 548 aa5.91□□□□□ -1.46
HMGB1P17-201ENST00000403495 PICK1Q9NRD5 415 aa5.91□□□□□ -1.46
HMGB1P17-201ENST00000403495 ENAMQ9NRM1 1142 aa5.91□□□□□ -1.46
HMGB1P17-201ENST00000403495 B2RBV5 119 aa5.9□□□□□ -1.46
HMGB1P17-201ENST00000403495 PGRP06401 933 aa5.9□□□□□ -1.46
HMGB1P17-201ENST00000403495 LORP23490 312 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P17-201ENST00000403495 ID3Q02535 119 aa5.9□□□□□ -1.46
HMGB1P17-201ENST00000403495 TRIM28Q13263 835 aaKnown RBP5.9□□□□□ -1.46
HMGB1P17-201ENST00000403495 EXOSC6Q5RKV6 272 aaKnown RBP5.9□□□□□ -1.46
HMGB1P17-201ENST00000403495 LARP1BQ659C4 914 aaKnown RBP5.9□□□□□ -1.46
HMGB1P17-201ENST00000403495 DIEXFQ68CQ4 756 aaKnown RBP5.9□□□□□ -1.46
HMGB1P17-201ENST00000403495 OVOS1Q6IE37 1185 aa5.9□□□□□ -1.46
HMGB1P17-201ENST00000403495 FAM177A1Q8N128 213 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P17-201ENST00000403495 DTWD1Q8N5C7 304 aa5.9□□□□□ -1.46
HMGB1P17-201ENST00000403495 DPH2Q9BQC3 489 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P17-201ENST00000403495 TMPRSS13Q9BYE2 586 aa5.9□□□□□ -1.46
HMGB1P17-201ENST00000403495 FBRSQ9HAH7 460 aa5.9□□□□□ -1.46
HMGB1P17-201ENST00000403495 SNCAIPQ9Y6H5 919 aa5.9□□□□□ -1.46
HMGB1P17-201ENST00000403495 CHURC1-FNTBB4DL54 471 aa5.89□□□□□ -1.47
HMGB1P17-201ENST00000403495 K7ELQ4 463 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P17-201ENST00000403495 GNB5O14775 395 aa5.89□□□□□ -1.47
HMGB1P17-201ENST00000403495 ATE1O95260 518 aa5.89□□□□□ -1.47
HMGB1P17-201ENST00000403495 NEFMP07197 916 aa5.89□□□□□ -1.47
HMGB1P17-201ENST00000403495 SLFN14P0C7P3 912 aa5.89□□□□□ -1.47
HMGB1P17-201ENST00000403495 HCLS1P14317 486 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P17-201ENST00000403495 POLR2BP30876 1174 aaKnown RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms