RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 SLC12A7Q9Y666 1083 aa18.32■□□□□ 0.52
CDC42-203ENST00000400259 CCDC69A6NI79 296 aa18.32■□□□□ 0.52
CDC42-203ENST00000400259 FAM160A1Q05DH4 1040 aa18.32■□□□□ 0.52
CDC42-203ENST00000400259 SNW1Q13573 536 aaKnown RBP18.32■□□□□ 0.52
CDC42-203ENST00000400259 FAM182BQ5T319 152 aa18.32■□□□□ 0.52
CDC42-203ENST00000400259 CKAP2LQ8IYA6 745 aa18.32■□□□□ 0.52
CDC42-203ENST00000400259 TMTC2Q8N394 836 aa18.32■□□□□ 0.52
CDC42-203ENST00000400259 KCNG4Q8TDN1 519 aa18.32■□□□□ 0.52
CDC42-203ENST00000400259 ALG1Q9BT22 464 aa18.32■□□□□ 0.52
CDC42-203ENST00000400259 GOLPH3LQ9H4A5 285 aa18.32■□□□□ 0.52
CDC42-203ENST00000400259 ZNF500O60304 480 aaPredicted RBP18.31■□□□□ 0.52
CDC42-203ENST00000400259 ADCY5O95622 1261 aa18.31■□□□□ 0.52
CDC42-203ENST00000400259 ADALQ6DHV7 355 aa18.31■□□□□ 0.52
CDC42-203ENST00000400259 CCDC73Q6ZRK6 1079 aa18.31■□□□□ 0.52
CDC42-203ENST00000400259 ZNF384Q8TF68 577 aa18.31■□□□□ 0.52
CDC42-203ENST00000400259 IRS2Q9Y4H2 1338 aa18.31■□□□□ 0.52
CDC42-203ENST00000400259 KIF28PB7ZC32 967 aa18.3■□□□□ 0.52
CDC42-203ENST00000400259 CAVIN2O95810 425 aa18.3■□□□□ 0.52
CDC42-203ENST00000400259 IARSP41252 1262 aaKnown RBP18.3■□□□□ 0.52
CDC42-203ENST00000400259 PCDHA7Q9UN72 937 aa18.3■□□□□ 0.52
CDC42-203ENST00000400259 RANBP6O60518 1105 aaKnown RBP18.3■□□□□ 0.52
CDC42-203ENST00000400259 IFNAR1P17181 557 aa18.3■□□□□ 0.52
CDC42-203ENST00000400259 ADRA2BP18089 450 aa18.3■□□□□ 0.52
CDC42-203ENST00000400259 RXRAP19793 462 aa18.3■□□□□ 0.52
CDC42-203ENST00000400259 KLRK1P26718 216 aa18.3■□□□□ 0.52
CDC42-203ENST00000400259 HIBADHP31937 336 aaKnown RBP18.3■□□□□ 0.52
CDC42-203ENST00000400259 ME1P48163 572 aa18.3■□□□□ 0.52
CDC42-203ENST00000400259 TRAPPC3LQ5T215 181 aa18.3■□□□□ 0.52
CDC42-203ENST00000400259 SYNE3Q6ZMZ3 975 aa18.3■□□□□ 0.52
CDC42-203ENST00000400259 SDR42E1Q8WUS8 393 aa18.3■□□□□ 0.52
CDC42-203ENST00000400259 GJB4Q9NTQ9 266 aa18.3■□□□□ 0.52
CDC42-203ENST00000400259 IGSF3O75054 1194 aa18.29■□□□□ 0.52
CDC42-203ENST00000400259 PCP11498 1178 aaKnown RBP18.29■□□□□ 0.52
CDC42-203ENST00000400259 RFC4P35249 363 aa18.29■□□□□ 0.52
CDC42-203ENST00000400259 WTAPQ15007 396 aa18.29■□□□□ 0.52
CDC42-203ENST00000400259 KRT40Q6A162 431 aa18.29■□□□□ 0.52
CDC42-203ENST00000400259 SASS6Q6UVJ0 657 aa18.29■□□□□ 0.52
CDC42-203ENST00000400259 CLIC4Q9Y696 253 aa18.29■□□□□ 0.52
CDC42-203ENST00000400259 FMNL1O95466 1100 aaPredicted RBP18.29■□□□□ 0.52
CDC42-203ENST00000400259 POLR3DP05423 398 aaPredicted RBP18.29■□□□□ 0.52
CDC42-203ENST00000400259 FGRP09769 529 aa18.29■□□□□ 0.52
CDC42-203ENST00000400259 MPNDQ8N594 471 aa18.29■□□□□ 0.52
CDC42-203ENST00000400259 MRPS27Q92552 414 aaKnown RBP18.29■□□□□ 0.52
CDC42-203ENST00000400259 NSUN4Q96CB9 384 aaKnown RBP18.29■□□□□ 0.52
CDC42-203ENST00000400259 AFF2P51816 1311 aa18.28■□□□□ 0.52
CDC42-203ENST00000400259 ERICH2A1L162 156 aa18.28■□□□□ 0.52
CDC42-203ENST00000400259 STK38Q15208 465 aa18.28■□□□□ 0.52
CDC42-203ENST00000400259 ANO6Q4KMQ2 910 aa18.28■□□□□ 0.52
CDC42-203ENST00000400259 RRP12Q5JTH9 1297 aaKnown RBP18.28■□□□□ 0.52
CDC42-203ENST00000400259 FSIP1Q8NA03 581 aa18.28■□□□□ 0.52
CDC42-203ENST00000400259 PHKBQ93100 1093 aa18.28■□□□□ 0.52
CDC42-203ENST00000400259 AIFM3Q96NN9 605 aa18.28■□□□□ 0.52
CDC42-203ENST00000400259 MYL10Q9BUA6 226 aa18.28■□□□□ 0.52
CDC42-203ENST00000400259 BCL11BQ9C0K0 894 aaPredicted RBP18.28■□□□□ 0.52
CDC42-203ENST00000400259 U2AF2P26368 475 aaKnown RBP eCLIP18.28■□□□□ 0.521e-6■■■□□ 14.8
CDC42-203ENST00000400259 SSRP1Q08945 709 aaKnown RBP18.28■□□□□ 0.52
CDC42-203ENST00000400259 MEX3CQ5U5Q3 659 aaKnown RBP18.28■□□□□ 0.52
CDC42-203ENST00000400259 ANO1Q5XXA6 986 aa18.28■□□□□ 0.52
CDC42-203ENST00000400259 FMR1NBQ8N0W7 255 aaPredicted RBP18.28■□□□□ 0.52
CDC42-203ENST00000400259 WASF1Q92558 559 aa18.28■□□□□ 0.52
CDC42-203ENST00000400259 ESR2Q92731 530 aa18.28■□□□□ 0.52
CDC42-203ENST00000400259 SPTLC2O15270 562 aa18.27■□□□□ 0.52
CDC42-203ENST00000400259 KINO60870 393 aaKnown RBP18.27■□□□□ 0.52
CDC42-203ENST00000400259 PTMAP06454 111 aaKnown RBP18.27■□□□□ 0.52
CDC42-203ENST00000400259 SEC23AQ15436 765 aa18.27■□□□□ 0.52
CDC42-203ENST00000400259 CBX8Q9HC52 389 aa18.27■□□□□ 0.52
CDC42-203ENST00000400259 AP5Z1O43299 807 aa18.26■□□□□ 0.51
CDC42-203ENST00000400259 DYNLL1P63167 89 aaKnown RBP18.26■□□□□ 0.51
CDC42-203ENST00000400259 MECOMQ03112 1051 aa18.26■□□□□ 0.51
CDC42-203ENST00000400259 NFIXQ14938 502 aa18.26■□□□□ 0.51
CDC42-203ENST00000400259 PPP2R5BQ15173 497 aa18.26■□□□□ 0.51
CDC42-203ENST00000400259 RTN1Q16799 776 aa18.26■□□□□ 0.51
CDC42-203ENST00000400259 FAM196AQ6ZSG2 479 aa18.26■□□□□ 0.51
CDC42-203ENST00000400259 CCDC144CPQ8IYA2 1237 aa18.26■□□□□ 0.51
CDC42-203ENST00000400259 TOMM22Q9NS69 142 aa18.26■□□□□ 0.51
CDC42-203ENST00000400259 TRPC5Q9UL62 973 aaPredicted RBP18.26■□□□□ 0.51
CDC42-203ENST00000400259 CCDC196A0A1B0GTZ2 297 aa18.26■□□□□ 0.51
CDC42-203ENST00000400259 MINDY4BA8MYZ0 360 aa18.26■□□□□ 0.51
CDC42-203ENST00000400259 GRAPQ13588 217 aa18.26■□□□□ 0.51
CDC42-203ENST00000400259 TDRD7Q8NHU6 1098 aaKnown RBP18.26■□□□□ 0.51
CDC42-203ENST00000400259 GRAPLQ8TC17 118 aaPredicted RBP18.26■□□□□ 0.51
CDC42-203ENST00000400259 UBAC1Q9BSL1 405 aa18.26■□□□□ 0.51
CDC42-203ENST00000400259 TRIM29Q14134 588 aa18.25■□□□□ 0.51
CDC42-203ENST00000400259 SLC39A14Q15043 492 aa18.25■□□□□ 0.51
CDC42-203ENST00000400259 NBPF11Q86T75 865 aa18.25■□□□□ 0.51
CDC42-203ENST00000400259 SEPT12Q8IYM1 358 aa18.25■□□□□ 0.51
CDC42-203ENST00000400259 ZNF654Q8IZM8 581 aa18.25■□□□□ 0.51
CDC42-203ENST00000400259 CCDC24Q8N4L8 307 aa18.25■□□□□ 0.51
CDC42-203ENST00000400259 TFCP2L1Q9NZI6 479 aa18.25■□□□□ 0.51
CDC42-203ENST00000400259 BRWD3Q6RI45 1802 aa18.25■□□□□ 0.51
CDC42-203ENST00000400259 SF3A1Q15459 793 aaKnown RBP18.25■□□□□ 0.51
CDC42-203ENST00000400259 ZKSCAN3Q9BRR0 538 aa18.25■□□□□ 0.51
CDC42-203ENST00000400259 SLC26A6Q9BXS9 759 aa18.25■□□□□ 0.51
CDC42-203ENST00000400259 LRRC4BQ9NT99 713 aa18.25■□□□□ 0.51
CDC42-203ENST00000400259 LEMD3Q9Y2U8 911 aa18.25■□□□□ 0.51
CDC42-203ENST00000400259 AXDND1Q5T1B0 1012 aaPredicted RBP18.24■□□□□ 0.51
CDC42-203ENST00000400259 LUZP1Q86V48 1076 aa18.24■□□□□ 0.51
CDC42-203ENST00000400259 CNBD1Q8NA66 436 aa18.24■□□□□ 0.51
CDC42-203ENST00000400259 ZMYND15Q9H091 742 aa18.24■□□□□ 0.51
CDC42-203ENST00000400259 TNKSO95271 1327 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms