RNA–Protein interactions for RNA: ENST00000399975.7

USP16-203, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP16, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-203ENST00000399975 USP40Q9NVE5 1235 aa8.15□□□□□ -1.1
USP16-203ENST00000399975 GPRC5DQ9NZD1 345 aa8.15□□□□□ -1.1
USP16-203ENST00000399975 FLT1P17948 1338 aa8.15□□□□□ -1.1
USP16-203ENST00000399975 CYP21A2P08686 494 aa8.15□□□□□ -1.11
USP16-203ENST00000399975 PSMA5P28066 241 aa8.15□□□□□ -1.11
USP16-203ENST00000399975 DLGAP5Q15398 846 aa8.15□□□□□ -1.11
USP16-203ENST00000399975 DDRGK1Q96HY6 314 aa8.15□□□□□ -1.11
USP16-203ENST00000399975 NBPF3Q9H094 633 aa8.15□□□□□ -1.11
USP16-203ENST00000399975 NAPBQ9H115 298 aa8.15□□□□□ -1.11
USP16-203ENST00000399975 ZSWIM6Q9HCJ5 1215 aa8.15□□□□□ -1.11
USP16-203ENST00000399975 PALD1Q9ULE6 856 aa8.15□□□□□ -1.11
USP16-203ENST00000399975 F8W031 263 aaPredicted RBP8.14□□□□□ -1.11
USP16-203ENST00000399975 ZNF213O14771 459 aa8.14□□□□□ -1.11
USP16-203ENST00000399975 HMGB1P09429 215 aaKnown RBP8.14□□□□□ -1.11
USP16-203ENST00000399975 C12orf60Q5U649 245 aa8.14□□□□□ -1.11
USP16-203ENST00000399975 FAM83AQ86UY5 434 aa8.14□□□□□ -1.11
USP16-203ENST00000399975 RASEFQ8IZ41 740 aa8.14□□□□□ -1.11
USP16-203ENST00000399975 SNX21Q969T3 373 aa8.14□□□□□ -1.11
USP16-203ENST00000399975 EHD4Q9H223 541 aa8.14□□□□□ -1.11
USP16-203ENST00000399975 CNOT7Q9UIV1 285 aaKnown RBP8.14□□□□□ -1.11
USP16-203ENST00000399975 ZBTB12Q9Y330 459 aaPredicted RBP8.14□□□□□ -1.11
USP16-203ENST00000399975 PITPNM2Q9BZ72 1349 aa8.14□□□□□ -1.11
USP16-203ENST00000399975 ORC4O43929 436 aa8.14□□□□□ -1.11
USP16-203ENST00000399975 PPARAQ07869 468 aa8.14□□□□□ -1.11
USP16-203ENST00000399975 MICALL2Q8IY33 904 aa8.14□□□□□ -1.11
USP16-203ENST00000399975 PRMT6Q96LA8 375 aaPredicted RBP8.14□□□□□ -1.11
USP16-203ENST00000399975 OSBPL5Q9H0X9 879 aaPredicted RBP8.14□□□□□ -1.11
USP16-203ENST00000399975 DHX36Q9H2U1 1008 aaKnown RBP8.14□□□□□ -1.11
USP16-203ENST00000399975 ZNF70Q9UC06 446 aaPredicted RBP8.14□□□□□ -1.11
USP16-203ENST00000399975 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.14□□□□□ -1.11
USP16-203ENST00000399975 MYH8P13535 1937 aa8.14□□□□□ -1.11
USP16-203ENST00000399975 GLTPD2A6NH11 291 aa8.13□□□□□ -1.11
USP16-203ENST00000399975 H7C1D1 291 aa8.13□□□□□ -1.11
USP16-203ENST00000399975 USP5P45974 858 aa8.13□□□□□ -1.11
USP16-203ENST00000399975 TDO2P48775 406 aa8.13□□□□□ -1.11
USP16-203ENST00000399975 TGFBRAP1Q8WUH2 860 aa8.13□□□□□ -1.11
USP16-203ENST00000399975 SDR42E1Q8WUS8 393 aa8.13□□□□□ -1.11
USP16-203ENST00000399975 RNF41Q9H4P4 317 aaPredicted RBP8.13□□□□□ -1.11
USP16-203ENST00000399975 CNNM2Q9H8M5 875 aa8.13□□□□□ -1.11
USP16-203ENST00000399975 PGAP2Q9UHJ9 254 aa8.13□□□□□ -1.11
USP16-203ENST00000399975 CNTNAP1P78357 1384 aa8.13□□□□□ -1.11
USP16-203ENST00000399975 E7EWF7 191 aa8.13□□□□□ -1.11
USP16-203ENST00000399975 DPY19L2Q6NUT2 758 aa8.13□□□□□ -1.11
USP16-203ENST00000399975 FAM198AQ9UFP1 575 aa8.13□□□□□ -1.11
USP16-203ENST00000399975 WNT10BO00744 389 aa8.13□□□□□ -1.11
USP16-203ENST00000399975 APPP05067 770 aa8.13□□□□□ -1.11
USP16-203ENST00000399975 SLC3A2P08195 630 aaKnown RBP8.13□□□□□ -1.11
USP16-203ENST00000399975 EXOSC10Q01780 885 aaKnown RBP8.13□□□□□ -1.11
USP16-203ENST00000399975 MAP3K10Q02779 954 aa8.13□□□□□ -1.11
USP16-203ENST00000399975 GABPAQ06546 454 aa8.13□□□□□ -1.11
USP16-203ENST00000399975 AKNAD1Q5T1N1 836 aa8.13□□□□□ -1.11
USP16-203ENST00000399975 STOX1Q6ZVD7 989 aa8.13□□□□□ -1.11
USP16-203ENST00000399975 AMOTL1Q8IY63 956 aa8.13□□□□□ -1.11
USP16-203ENST00000399975 FAM151AQ8WW52 585 aa8.13□□□□□ -1.11
USP16-203ENST00000399975 TTC14Q96N46 770 aa8.13□□□□□ -1.11
USP16-203ENST00000399975 DDX4Q9NQI0 724 aaKnown RBP8.13□□□□□ -1.11
USP16-203ENST00000399975 ADARB2Q9NS39 739 aaKnown RBP8.13□□□□□ -1.11
USP16-203ENST00000399975 PPP2R3BQ9Y5P8 575 aa8.13□□□□□ -1.11
USP16-203ENST00000399975 PAPPA2Q9BXP8 1791 aa8.12□□□□□ -1.11
USP16-203ENST00000399975 USP17L12C9JPN9 530 aa8.12□□□□□ -1.11
USP16-203ENST00000399975 USP17L21D6R901 530 aa8.12□□□□□ -1.11
USP16-203ENST00000399975 MYO1BO43795 1136 aa8.12□□□□□ -1.11
USP16-203ENST00000399975 KIF4BQ2VIQ3 1234 aa8.12□□□□□ -1.11
USP16-203ENST00000399975 C16orf86Q6ZW13 317 aa8.12□□□□□ -1.11
USP16-203ENST00000399975 USP50Q70EL3 339 aaPredicted RBP8.12□□□□□ -1.11
USP16-203ENST00000399975 RUFY3Q7L099 469 aa8.12□□□□□ -1.11
USP16-203ENST00000399975 TTC6Q86TZ1 520 aa8.12□□□□□ -1.11
USP16-203ENST00000399975 TBC1D10CQ8IV04 446 aa8.12□□□□□ -1.11
USP16-203ENST00000399975 MB21D2Q8IYB1 491 aaPredicted RBP8.12□□□□□ -1.11
USP16-203ENST00000399975 NEK1Q96PY6 1258 aa8.12□□□□□ -1.11
USP16-203ENST00000399975 AGXT2Q9BYV1 514 aa8.12□□□□□ -1.11
USP16-203ENST00000399975 KRT23Q9C075 422 aa8.12□□□□□ -1.11
USP16-203ENST00000399975 TMOD2Q9NZR1 351 aa8.12□□□□□ -1.11
USP16-203ENST00000399975 SWAP70Q9UH65 585 aa8.12□□□□□ -1.11
USP16-203ENST00000399975 PCDHAC2Q9Y5I4 1007 aa8.12□□□□□ -1.11
USP16-203ENST00000399975 GJA3Q9Y6H8 435 aa8.12□□□□□ -1.11
USP16-203ENST00000399975 PLIN4Q96Q06 1357 aa8.12□□□□□ -1.11
USP16-203ENST00000399975 TBC1D12O60347 775 aa8.12□□□□□ -1.11
USP16-203ENST00000399975 RPS6KB1P23443 525 aa8.12□□□□□ -1.11
USP16-203ENST00000399975 MCM2P49736 904 aa8.12□□□□□ -1.11
USP16-203ENST00000399975 RBM5P52756 815 aaKnown RBP eCLIP8.12□□□□□ -1.11
USP16-203ENST00000399975 NCOA7Q8NI08 942 aa8.12□□□□□ -1.11
USP16-203ENST00000399975 TDRD3Q9H7E2 651 aaKnown RBP8.12□□□□□ -1.11
USP16-203ENST00000399975 TACC3Q9Y6A5 838 aa8.12□□□□□ -1.11
USP16-203ENST00000399975 DCAF8L1A6NGE4 600 aa8.11□□□□□ -1.11
USP16-203ENST00000399975 LMOD1P29536 600 aaPredicted RBP8.11□□□□□ -1.11
USP16-203ENST00000399975 ADCK5Q3MIX3 580 aa8.11□□□□□ -1.11
USP16-203ENST00000399975 APOBEC3FQ8IUX4 373 aaKnown RBP8.11□□□□□ -1.11
USP16-203ENST00000399975 FOXP4Q8IVH2 680 aaPredicted RBP8.11□□□□□ -1.11
USP16-203ENST00000399975 MAPKAPK5Q8IW41 473 aa8.11□□□□□ -1.11
USP16-203ENST00000399975 ZC3H15Q8WU90 426 aaKnown RBP8.11□□□□□ -1.11
USP16-203ENST00000399975 ZNF287Q9HBT7 754 aa8.11□□□□□ -1.11
USP16-203ENST00000399975 TCP11L1Q9NUJ3 509 aa8.11□□□□□ -1.11
USP16-203ENST00000399975 MCM9Q9NXL9 1143 aa8.11□□□□□ -1.11
USP16-203ENST00000399975 TAF6LQ9Y6J9 622 aa8.11□□□□□ -1.11
USP16-203ENST00000399975 SHTN1A0MZ66 631 aa8.11□□□□□ -1.11
USP16-203ENST00000399975 DDNO94850 711 aaPredicted RBP8.11□□□□□ -1.11
USP16-203ENST00000399975 TNNI2P48788 182 aa8.11□□□□□ -1.11
USP16-203ENST00000399975 TNFAIP1Q13829 316 aa8.11□□□□□ -1.11
USP16-203ENST00000399975 DHX32Q7L7V1 743 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms