RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 PIH1D3Q9NQM4 214 aaKnown RBP10.28□□□□□ -0.76
USP16-202ENST00000399973 RNF186Q9NXI6 227 aa10.28□□□□□ -0.76
USP16-202ENST00000399973 SAGE1Q9NXZ1 904 aa10.28□□□□□ -0.76
USP16-202ENST00000399973 FAM198AQ9UFP1 575 aa10.28□□□□□ -0.76
USP16-202ENST00000399973 MYH8P13535 1937 aa10.27□□□□□ -0.76
USP16-202ENST00000399973 RAB11FIP3O75154 756 aa10.27□□□□□ -0.77
USP16-202ENST00000399973 ZBTB48P10074 688 aaPredicted RBP10.27□□□□□ -0.77
USP16-202ENST00000399973 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.27□□□□□ -0.77
USP16-202ENST00000399973 ZFPM1Q8IX07 1006 aa10.27□□□□□ -0.77
USP16-202ENST00000399973 TEX11Q8IYF3 940 aa10.27□□□□□ -0.77
USP16-202ENST00000399973 REM2Q8IYK8 340 aaPredicted RBP10.27□□□□□ -0.77
USP16-202ENST00000399973 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.27□□□□□ -0.77
USP16-202ENST00000399973 ZKSCAN4Q969J2 545 aaPredicted RBP10.27□□□□□ -0.77
USP16-202ENST00000399973 ZNF512BQ96KM6 892 aaPredicted RBP10.27□□□□□ -0.77
USP16-202ENST00000399973 DNAJC2Q99543 621 aaKnown RBP10.27□□□□□ -0.77
USP16-202ENST00000399973 AATFQ9NY61 560 aaKnown RBP eCLIP10.27□□□□□ -0.77
USP16-202ENST00000399973 DDX60LQ5H9U9 1706 aaKnown RBP10.27□□□□□ -0.77
USP16-202ENST00000399973 PTPRFP10586 1907 aa10.27□□□□□ -0.77
USP16-202ENST00000399973 PHIPQ8WWQ0 1821 aa10.26□□□□□ -0.77
USP16-202ENST00000399973 GPR75-ASB3A0A0A6YYF3 556 aa10.26□□□□□ -0.77
USP16-202ENST00000399973 MANSC4A6NHS7 340 aaPredicted RBP10.26□□□□□ -0.77
USP16-202ENST00000399973 SMARCA5O60264 1052 aaPredicted RBP10.26□□□□□ -0.77
USP16-202ENST00000399973 ENTPD3O75355 529 aa10.26□□□□□ -0.77
USP16-202ENST00000399973 WDHD1O75717 1129 aaPredicted RBP10.26□□□□□ -0.77
USP16-202ENST00000399973 DSG3P32926 999 aa10.26□□□□□ -0.77
USP16-202ENST00000399973 GJA5P36382 358 aa10.26□□□□□ -0.77
USP16-202ENST00000399973 MAP3K9P80192 1104 aa10.26□□□□□ -0.77
USP16-202ENST00000399973 IFFO2Q5TF58 517 aa10.26□□□□□ -0.77
USP16-202ENST00000399973 SH3RF3Q8TEJ3 882 aaPredicted RBP10.26□□□□□ -0.77
USP16-202ENST00000399973 CRBNQ96SW2 442 aa10.26□□□□□ -0.77
USP16-202ENST00000399973 IDI2Q9BXS1 227 aa10.26□□□□□ -0.77
USP16-202ENST00000399973 LRRCC1Q9C099 1032 aa10.26□□□□□ -0.77
USP16-202ENST00000399973 DDX4Q9NQI0 724 aaKnown RBP10.26□□□□□ -0.77
USP16-202ENST00000399973 SNCAIPQ9Y6H5 919 aa10.26□□□□□ -0.77
USP16-202ENST00000399973 COL2A1P02458 1487 aaPredicted RBP10.25□□□□□ -0.77
USP16-202ENST00000399973 UNCXA6NJT0 531 aa10.25□□□□□ -0.77
USP16-202ENST00000399973 FAM196BA6NMK8 535 aa10.25□□□□□ -0.77
USP16-202ENST00000399973 GOLIM4O00461 696 aa10.25□□□□□ -0.77
USP16-202ENST00000399973 TBC1D8O95759 1140 aa10.25□□□□□ -0.77
USP16-202ENST00000399973 BAG3O95817 575 aa10.25□□□□□ -0.77
USP16-202ENST00000399973 CYP7A1P22680 504 aa10.25□□□□□ -0.77
USP16-202ENST00000399973 INPP5BP32019 993 aa10.25□□□□□ -0.77
USP16-202ENST00000399973 RHBDL3P58872 404 aa10.25□□□□□ -0.77
USP16-202ENST00000399973 ADGRA1Q86SQ6 560 aa10.25□□□□□ -0.77
USP16-202ENST00000399973 MAGEB6Q8N7X4 407 aa10.25□□□□□ -0.77
USP16-202ENST00000399973 MIGA1Q8NAN2 632 aa10.25□□□□□ -0.77
USP16-202ENST00000399973 FAM163AQ96GL9 167 aaPredicted RBP10.25□□□□□ -0.77
USP16-202ENST00000399973 ANTXR1Q9H6X2 564 aa10.25□□□□□ -0.77
USP16-202ENST00000399973 ATRNL1Q5VV63 1379 aa10.25□□□□□ -0.77
USP16-202ENST00000399973 ZSWIM8A7E2V4 1837 aa10.24□□□□□ -0.77
USP16-202ENST00000399973 CCL15-CCL14A0A0B4J2E2 113 aa10.24□□□□□ -0.77
USP16-202ENST00000399973 DDTLA6NHG4 134 aaPredicted RBP10.24□□□□□ -0.77
USP16-202ENST00000399973 SPDYE5A6NIY4 337 aa10.24□□□□□ -0.77
USP16-202ENST00000399973 IGF2BP3O00425 579 aaKnown RBP eCLIP10.24□□□□□ -0.77
USP16-202ENST00000399973 DYNLL1P63167 89 aaKnown RBP10.24□□□□□ -0.77
USP16-202ENST00000399973 MAP3K12Q12852 859 aa10.24□□□□□ -0.77
USP16-202ENST00000399973 CCL15Q16663 113 aa10.24□□□□□ -0.77
USP16-202ENST00000399973 SLC4A8Q2Y0W8 1093 aa10.24□□□□□ -0.77
USP16-202ENST00000399973 SAMD1Q6SPF0 538 aaPredicted RBP10.24□□□□□ -0.77
USP16-202ENST00000399973 SH3BP5LQ7L8J4 393 aa10.24□□□□□ -0.77
USP16-202ENST00000399973 MAPKAPK5Q8IW41 473 aa10.24□□□□□ -0.77
USP16-202ENST00000399973 OSBPL5Q9H0X9 879 aaPredicted RBP10.24□□□□□ -0.77
USP16-202ENST00000399973 BAZ2AQ9UIF9 1905 aaKnown RBP10.24□□□□□ -0.77
USP16-202ENST00000399973 SLURP2P0DP57 97 aa10.23□□□□□ -0.77
USP16-202ENST00000399973 PLCG2P16885 1265 aa10.23□□□□□ -0.77
USP16-202ENST00000399973 TM4SF4P48230 202 aa10.23□□□□□ -0.77
USP16-202ENST00000399973 DGKZQ13574 1117 aa10.23□□□□□ -0.77
USP16-202ENST00000399973 TTF1Q15361 905 aaPredicted RBP10.23□□□□□ -0.77
USP16-202ENST00000399973 ERO1BQ86YB8 467 aa10.23□□□□□ -0.77
USP16-202ENST00000399973 IFNL1Q8IU54 200 aa10.23□□□□□ -0.77
USP16-202ENST00000399973 EDC3Q96F86 508 aaKnown RBP10.23□□□□□ -0.77
USP16-202ENST00000399973 SAP30BPQ9UHR5 308 aaKnown RBP10.23□□□□□ -0.77
USP16-202ENST00000399973 FLT1P17948 1338 aa10.23□□□□□ -0.77
USP16-202ENST00000399973 LOC285556D6RIA3 1793 aa10.23□□□□□ -0.77
USP16-202ENST00000399973 MAP4K4O95819 1239 aaPredicted RBP10.22□□□□□ -0.77
USP16-202ENST00000399973 ALDH1A1P00352 501 aa10.22□□□□□ -0.77
USP16-202ENST00000399973 USP5P45974 858 aa10.22□□□□□ -0.77
USP16-202ENST00000399973 GTF2A2P52657 109 aa10.22□□□□□ -0.77
USP16-202ENST00000399973 INHBEP58166 350 aa10.22□□□□□ -0.77
USP16-202ENST00000399973 PPIL2Q13356 520 aa10.22□□□□□ -0.77
USP16-202ENST00000399973 OTUD7BQ6GQQ9 843 aa10.22□□□□□ -0.77
USP16-202ENST00000399973 TGFBRAP1Q8WUH2 860 aa10.22□□□□□ -0.77
USP16-202ENST00000399973 BRI3BPQ8WY22 251 aa10.22□□□□□ -0.77
USP16-202ENST00000399973 GPATCH3Q96I76 525 aa10.22□□□□□ -0.77
USP16-202ENST00000399973 TRIM34Q9BYJ4 488 aa10.22□□□□□ -0.77
USP16-202ENST00000399973 BOLA2Q9H3K6 86 aa10.22□□□□□ -0.77
USP16-202ENST00000399973 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.22□□□□□ -0.77
USP16-202ENST00000399973 PICK1Q9NRD5 415 aa10.22□□□□□ -0.77
USP16-202ENST00000399973 PAG1Q9NWQ8 432 aa10.22□□□□□ -0.77
USP16-202ENST00000399973 PCDHB15Q9Y5E8 787 aa10.22□□□□□ -0.77
USP16-202ENST00000399973 GPR25O00155 361 aa10.21□□□□□ -0.77
USP16-202ENST00000399973 IRF6O14896 467 aa10.21□□□□□ -0.77
USP16-202ENST00000399973 CETPP11597 493 aa10.21□□□□□ -0.77
USP16-202ENST00000399973 PDE6AP16499 860 aa10.21□□□□□ -0.77
USP16-202ENST00000399973 CRHR2Q13324 411 aa10.21□□□□□ -0.77
USP16-202ENST00000399973 SNAPC2Q13487 334 aa10.21□□□□□ -0.77
USP16-202ENST00000399973 TAF1CQ15572 869 aaPredicted RBP10.21□□□□□ -0.77
USP16-202ENST00000399973 NOL9Q5SY16 702 aaKnown RBP10.21□□□□□ -0.77
USP16-202ENST00000399973 SLC9C2Q5TAH2 1124 aa10.21□□□□□ -0.77
USP16-202ENST00000399973 TSHZ3Q63HK5 1081 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms