RNA–Protein interactions for RNA: ENST00000398844.6

SEC24A-202, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SEC24A, Length 6,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-202ENST00000398844 PDE6AP16499 860 aa10.37□□□□□ -0.75
SEC24A-202ENST00000398844 ZNF827Q17R98 1081 aa10.37□□□□□ -0.75
SEC24A-202ENST00000398844 ZMYM1Q5SVZ6 1142 aa10.37□□□□□ -0.75
SEC24A-202ENST00000398844 NYXQ9GZU5 481 aa10.37□□□□□ -0.75
SEC24A-202ENST00000398844 EXOC1Q9NV70 894 aa10.37□□□□□ -0.75
SEC24A-202ENST00000398844 CGNQ9P2M7 1197 aaKnown RBP10.37□□□□□ -0.75
SEC24A-202ENST00000398844 KCNH3Q9ULD8 1083 aa10.37□□□□□ -0.75
SEC24A-202ENST00000398844 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.37□□□□□ -0.75
SEC24A-202ENST00000398844 FER1L4A9Z1Z3 1794 aa10.37□□□□□ -0.75
SEC24A-202ENST00000398844 CUL4AQ13619 759 aa10.36□□□□□ -0.75
SEC24A-202ENST00000398844 TM6SF1Q9BZW5 370 aa10.36□□□□□ -0.75
SEC24A-202ENST00000398844 ZNF287Q9HBT7 754 aa10.36□□□□□ -0.75
SEC24A-202ENST00000398844 PUF60Q9UHX1 559 aaKnown RBP10.36□□□□□ -0.75
SEC24A-202ENST00000398844 PCDHA7Q9UN72 937 aa10.36□□□□□ -0.75
SEC24A-202ENST00000398844 CARMIL3Q8ND23 1372 aa10.36□□□□□ -0.75
SEC24A-202ENST00000398844 TRIM75PA6NK02 468 aa10.36□□□□□ -0.75
SEC24A-202ENST00000398844 PFKFB1P16118 471 aa10.36□□□□□ -0.75
SEC24A-202ENST00000398844 DIS3L2Q8IYB7 885 aaKnown RBP10.36□□□□□ -0.75
SEC24A-202ENST00000398844 TRAPPC3LQ5T215 181 aa10.36□□□□□ -0.75
SEC24A-202ENST00000398844 TPTE2Q6XPS3 522 aa10.36□□□□□ -0.75
SEC24A-202ENST00000398844 NSUN7Q8NE18 718 aaKnown RBP10.36□□□□□ -0.75
SEC24A-202ENST00000398844 WDR17Q8IZU2 1322 aa10.36□□□□□ -0.75
SEC24A-202ENST00000398844 GOLGA8HP0CJ92 632 aa10.36□□□□□ -0.75
SEC24A-202ENST00000398844 UBA7P41226 1012 aa10.36□□□□□ -0.75
SEC24A-202ENST00000398844 GSTO1P78417 241 aa10.36□□□□□ -0.75
SEC24A-202ENST00000398844 FOXO4P98177 505 aa10.36□□□□□ -0.75
SEC24A-202ENST00000398844 GRAMD1CQ8IYS0 662 aa10.36□□□□□ -0.75
SEC24A-202ENST00000398844 GPKOWQ92917 476 aaPredicted RBP eCLIP10.36□□□□□ -0.755e-6■■■□□ 15.2
SEC24A-202ENST00000398844 PDCL3Q9H2J4 239 aa10.36□□□□□ -0.75
SEC24A-202ENST00000398844 SERTAD1Q9UHV2 236 aa10.36□□□□□ -0.75
SEC24A-202ENST00000398844 DENND2AQ9ULE3 1009 aa10.36□□□□□ -0.75
SEC24A-202ENST00000398844 SPATA31D1Q6ZQQ2 1576 aa10.36□□□□□ -0.75
SEC24A-202ENST00000398844 FRMPD2Q68DX3 1309 aaPredicted RBP10.36□□□□□ -0.75
SEC24A-202ENST00000398844 CACNA2D4Q7Z3S7 1137 aa10.36□□□□□ -0.75
SEC24A-202ENST00000398844 LCORLQ8N3X6 602 aa10.36□□□□□ -0.75
SEC24A-202ENST00000398844 CALML4Q96GE6 196 aa10.36□□□□□ -0.75
SEC24A-202ENST00000398844 CAPZA3Q96KX2 299 aa10.36□□□□□ -0.75
SEC24A-202ENST00000398844 PCCAP05165 728 aaPredicted RBP10.35□□□□□ -0.75
SEC24A-202ENST00000398844 LETM2Q2VYF4 491 aa10.35□□□□□ -0.75
SEC24A-202ENST00000398844 MSL1Q68DK7 614 aa10.35□□□□□ -0.75
SEC24A-202ENST00000398844 ZNF397Q8NF99 534 aaPredicted RBP10.35□□□□□ -0.75
SEC24A-202ENST00000398844 UBXN1Q04323 297 aa10.35□□□□□ -0.75
SEC24A-202ENST00000398844 TMCO3Q6UWJ1 677 aa10.35□□□□□ -0.75
SEC24A-202ENST00000398844 MCAMP43121 646 aa10.35□□□□□ -0.75
SEC24A-202ENST00000398844 NLRP12P59046 1061 aa10.35□□□□□ -0.75
SEC24A-202ENST00000398844 TMEM266Q2M3C6 531 aa10.35□□□□□ -0.75
SEC24A-202ENST00000398844 FKBP15Q5T1M5 1219 aa10.35□□□□□ -0.75
SEC24A-202ENST00000398844 TCP11L1Q9NUJ3 509 aa10.35□□□□□ -0.75
SEC24A-202ENST00000398844 ZMYM6O95789 1325 aa10.35□□□□□ -0.75
SEC24A-202ENST00000398844 CALM1P0DP23 149 aa10.35□□□□□ -0.75
SEC24A-202ENST00000398844 CALM2P0DP24 149 aa10.35□□□□□ -0.75
SEC24A-202ENST00000398844 CALM3P0DP25 149 aa10.35□□□□□ -0.75
SEC24A-202ENST00000398844 ARID5AQ03989 594 aa10.35□□□□□ -0.75
SEC24A-202ENST00000398844 USPL1Q5W0Q7 1092 aa10.35□□□□□ -0.75
SEC24A-202ENST00000398844 PPP1R9BQ96SB3 815 aa10.35□□□□□ -0.75
SEC24A-202ENST00000398844 VPS16Q9H269 839 aa10.35□□□□□ -0.75
SEC24A-202ENST00000398844 ANKRD26Q9UPS8 1709 aa10.35□□□□□ -0.75
SEC24A-202ENST00000398844 FANCCQ00597 558 aa10.35□□□□□ -0.75
SEC24A-202ENST00000398844 TDRD12Q587J7 1177 aaKnown RBP10.35□□□□□ -0.75
SEC24A-202ENST00000398844 SUSD4Q5VX71 490 aa10.35□□□□□ -0.75
SEC24A-202ENST00000398844 CCDC148Q8NFR7 591 aa10.35□□□□□ -0.75
SEC24A-202ENST00000398844 SMARCC1Q92922 1105 aaPredicted RBP10.35□□□□□ -0.75
SEC24A-202ENST00000398844 NEDD4P46934 1319 aa10.35□□□□□ -0.75
SEC24A-202ENST00000398844 PRIMPOLQ96LW4 560 aa10.34□□□□□ -0.75
SEC24A-202ENST00000398844 TSG101Q99816 390 aa10.34□□□□□ -0.75
SEC24A-202ENST00000398844 GOLPH3LQ9H4A5 285 aa10.34□□□□□ -0.75
SEC24A-202ENST00000398844 YEATS4O95619 227 aa10.34□□□□□ -0.75
SEC24A-202ENST00000398844 ASIC1P78348 528 aa10.34□□□□□ -0.75
SEC24A-202ENST00000398844 TMTC2Q8N394 836 aa10.34□□□□□ -0.75
SEC24A-202ENST00000398844 BMP2KQ9NSY1 1161 aaPredicted RBP10.34□□□□□ -0.75
SEC24A-202ENST00000398844 TNNI2P48788 182 aa10.34□□□□□ -0.75
SEC24A-202ENST00000398844 TCP10Q12799 353 aa10.34□□□□□ -0.75
SEC24A-202ENST00000398844 NLRP10Q86W26 655 aa10.34□□□□□ -0.75
SEC24A-202ENST00000398844 SRP68Q9UHB9 627 aaKnown RBP10.34□□□□□ -0.75
SEC24A-202ENST00000398844 DEXIO95424 95 aa10.34□□□□□ -0.75
SEC24A-202ENST00000398844 U2AF2P26368 475 aaKnown RBP eCLIP10.34□□□□□ -0.752e-8■■■□□ 15.4
SEC24A-202ENST00000398844 ADKP55263 362 aaKnown RBP10.34□□□□□ -0.75
SEC24A-202ENST00000398844 PLS1Q14651 629 aa10.34□□□□□ -0.75
SEC24A-202ENST00000398844 SPA17Q15506 151 aa10.34□□□□□ -0.75
SEC24A-202ENST00000398844 CNBD1Q8NA66 436 aa10.34□□□□□ -0.75
SEC24A-202ENST00000398844 TMEM87BQ96K49 555 aa10.34□□□□□ -0.75
SEC24A-202ENST00000398844 NEURL4Q96JN8 1562 aa10.34□□□□□ -0.75
SEC24A-202ENST00000398844 PXDNQ92626 1479 aa10.34□□□□□ -0.75
SEC24A-202ENST00000398844 NBPF26B4DH59 902 aa10.34□□□□□ -0.75
SEC24A-202ENST00000398844 NBPF14Q5TI25 921 aa10.34□□□□□ -0.75
SEC24A-202ENST00000398844 NBPF10Q6P3W6 841 aaKnown RBP10.34□□□□□ -0.75
SEC24A-202ENST00000398844 CYB5R4Q7L1T6 521 aa10.34□□□□□ -0.75
SEC24A-202ENST00000398844 NBPF15Q8N660 670 aa10.34□□□□□ -0.75
SEC24A-202ENST00000398844 TTC14Q96N46 770 aa10.34□□□□□ -0.75
SEC24A-202ENST00000398844 XPO4Q9C0E2 1151 aaKnown RBP10.34□□□□□ -0.75
SEC24A-202ENST00000398844 PAXBP1Q9Y5B6 917 aa10.34□□□□□ -0.75
SEC24A-202ENST00000398844 NEMFO60524 1076 aa10.33□□□□□ -0.76
SEC24A-202ENST00000398844 TERF1P54274 439 aa10.33□□□□□ -0.76
SEC24A-202ENST00000398844 RRP36Q96EU6 259 aaKnown RBP10.33□□□□□ -0.76
SEC24A-202ENST00000398844 CARD10Q9BWT7 1032 aa10.33□□□□□ -0.76
SEC24A-202ENST00000398844 ATG3Q9NT62 314 aa10.33□□□□□ -0.76
SEC24A-202ENST00000398844 MTX1Q13505 466 aa10.33□□□□□ -0.76
SEC24A-202ENST00000398844 SCARF1Q14162 830 aa10.33□□□□□ -0.76
SEC24A-202ENST00000398844 AKNAD1Q5T1N1 836 aa10.33□□□□□ -0.76
SEC24A-202ENST00000398844 KANK3Q6NY19 840 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms