RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 ZSWIM4Q9H7M6 989 aa16.09■□□□□ 0.17
PCDHGA11-201ENST00000398587 MED14O60244 1454 aa16.09■□□□□ 0.17
PCDHGA11-201ENST00000398587 PPARAQ07869 468 aa16.09■□□□□ 0.17
PCDHGA11-201ENST00000398587 MYSM1Q5VVJ2 828 aa16.09■□□□□ 0.17
PCDHGA11-201ENST00000398587 TAF3Q5VWG9 929 aa16.09■□□□□ 0.17
PCDHGA11-201ENST00000398587 IFNL3Q8IZI9 196 aa16.09■□□□□ 0.17
PCDHGA11-201ENST00000398587 ATG3Q9NT62 314 aa16.09■□□□□ 0.17
PCDHGA11-201ENST00000398587 E9PCH4 1651 aa16.09■□□□□ 0.17
PCDHGA11-201ENST00000398587 KRT83P78385 493 aa16.09■□□□□ 0.17
PCDHGA11-201ENST00000398587 POLA2Q14181 598 aa16.09■□□□□ 0.17
PCDHGA11-201ENST00000398587 BMS1Q14692 1282 aaKnown RBP16.09■□□□□ 0.17
PCDHGA11-201ENST00000398587 MPHOSPH6Q99547 160 aaKnown RBP16.09■□□□□ 0.17
PCDHGA11-201ENST00000398587 ZBTB1Q9Y2K1 713 aa16.09■□□□□ 0.17
PCDHGA11-201ENST00000398587 KRT13P13646 458 aa16.08■□□□□ 0.17
PCDHGA11-201ENST00000398587 CKAP4Q07065 602 aaKnown RBP16.08■□□□□ 0.17
PCDHGA11-201ENST00000398587 PAF1Q8N7H5 531 aa16.08■□□□□ 0.17
PCDHGA11-201ENST00000398587 LZTS2Q9BRK4 669 aa16.08■□□□□ 0.17
PCDHGA11-201ENST00000398587 PUS3Q9BZE2 481 aaKnown RBP16.08■□□□□ 0.17
PCDHGA11-201ENST00000398587 GLT8D2Q9H1C3 349 aa16.08■□□□□ 0.17
PCDHGA11-201ENST00000398587 HEG1Q9ULI3 1381 aa16.08■□□□□ 0.16
PCDHGA11-201ENST00000398587 POLR2DO15514 142 aaKnown RBP16.08■□□□□ 0.16
PCDHGA11-201ENST00000398587 MLKLQ8NB16 471 aa16.08■□□□□ 0.16
PCDHGA11-201ENST00000398587 CBX8Q9HC52 389 aa16.08■□□□□ 0.16
PCDHGA11-201ENST00000398587 TLR7Q9NYK1 1049 aaKnown RBP16.08■□□□□ 0.16
PCDHGA11-201ENST00000398587 ABCA6Q8N139 1617 aa16.08■□□□□ 0.16
PCDHGA11-201ENST00000398587 UBXN1Q04323 297 aa16.08■□□□□ 0.16
PCDHGA11-201ENST00000398587 ZMYM1Q5SVZ6 1142 aa16.08■□□□□ 0.16
PCDHGA11-201ENST00000398587 DPP8Q6V1X1 898 aaPredicted RBP16.08■□□□□ 0.16
PCDHGA11-201ENST00000398587 ZNF654Q8IZM8 581 aa16.08■□□□□ 0.16
PCDHGA11-201ENST00000398587 SLU7O95391 586 aaKnown RBP16.07■□□□□ 0.16
PCDHGA11-201ENST00000398587 HS2ST1Q7LGA3 356 aa16.07■□□□□ 0.16
PCDHGA11-201ENST00000398587 SH2D4AQ9H788 454 aa16.07■□□□□ 0.16
PCDHGA11-201ENST00000398587 ARPP21Q9UBL0 812 aaPredicted RBP16.07■□□□□ 0.16
PCDHGA11-201ENST00000398587 NCAPD2Q15021 1401 aa16.07■□□□□ 0.16
PCDHGA11-201ENST00000398587 USP17L12C9JPN9 530 aa16.07■□□□□ 0.16
PCDHGA11-201ENST00000398587 USP17L21D6R901 530 aa16.07■□□□□ 0.16
PCDHGA11-201ENST00000398587 SV2BQ7L1I2 683 aa16.07■□□□□ 0.16
PCDHGA11-201ENST00000398587 CNGA4Q8IV77 575 aa16.07■□□□□ 0.16
PCDHGA11-201ENST00000398587 PLIN2Q99541 437 aa16.07■□□□□ 0.16
PCDHGA11-201ENST00000398587 GPCPD1Q9NPB8 672 aa16.07■□□□□ 0.16
PCDHGA11-201ENST00000398587 LUC7L2Q9Y383 392 aaKnown RBP16.07■□□□□ 0.16
PCDHGA11-201ENST00000398587 TFAP4Q01664 338 aa16.07■□□□□ 0.16
PCDHGA11-201ENST00000398587 TBC1D5Q92609 795 aa16.07■□□□□ 0.16
PCDHGA11-201ENST00000398587 CCDC42Q96M95 316 aa16.07■□□□□ 0.16
PCDHGA11-201ENST00000398587 CTAGE15A4D2H0 777 aa16.07■□□□□ 0.16
PCDHGA11-201ENST00000398587 KRT86O43790 486 aa16.07■□□□□ 0.16
PCDHGA11-201ENST00000398587 CTAGE8P0CG41 777 aa16.07■□□□□ 0.16
PCDHGA11-201ENST00000398587 HLTFQ14527 1009 aaKnown RBP eCLIP16.07■□□□□ 0.16
PCDHGA11-201ENST00000398587 CTAGE6Q86UF2 777 aa16.07■□□□□ 0.16
PCDHGA11-201ENST00000398587 CTAGE4Q8IX94 777 aa16.07■□□□□ 0.16
PCDHGA11-201ENST00000398587 ADGRL3Q9HAR2 1447 aa16.06■□□□□ 0.16
PCDHGA11-201ENST00000398587 BCAMP50895 628 aa16.06■□□□□ 0.16
PCDHGA11-201ENST00000398587 PKP1Q13835 747 aa16.06■□□□□ 0.16
PCDHGA11-201ENST00000398587 FERMT2Q96AC1 680 aa16.06■□□□□ 0.16
PCDHGA11-201ENST00000398587 TACC1O75410 805 aa16.06■□□□□ 0.16
PCDHGA11-201ENST00000398587 GYG1P46976 350 aa16.06■□□□□ 0.16
PCDHGA11-201ENST00000398587 KIF5AQ12840 1032 aa16.06■□□□□ 0.16
PCDHGA11-201ENST00000398587 ADCK5Q3MIX3 580 aa16.06■□□□□ 0.16
PCDHGA11-201ENST00000398587 CHMP4BP1P59074 171 aa16.06■□□□□ 0.16
PCDHGA11-201ENST00000398587 NBPF14Q5TI25 921 aa16.06■□□□□ 0.16
PCDHGA11-201ENST00000398587 ADALQ6DHV7 355 aa16.06■□□□□ 0.16
PCDHGA11-201ENST00000398587 KCNJ14Q9UNX9 436 aa16.06■□□□□ 0.16
PCDHGA11-201ENST00000398587 PHKA1P46020 1223 aa16.06■□□□□ 0.16
PCDHGA11-201ENST00000398587 CRKLP46109 303 aaKnown RBP16.06■□□□□ 0.16
PCDHGA11-201ENST00000398587 PTPN12Q05209 780 aaKnown RBP16.06■□□□□ 0.16
PCDHGA11-201ENST00000398587 UBE4AQ14139 1066 aa16.06■□□□□ 0.16
PCDHGA11-201ENST00000398587 KRT25Q7Z3Z0 450 aa16.06■□□□□ 0.16
PCDHGA11-201ENST00000398587 MAPKAPK5Q8IW41 473 aa16.06■□□□□ 0.16
PCDHGA11-201ENST00000398587 BICD1Q96G01 975 aa16.06■□□□□ 0.16
PCDHGA11-201ENST00000398587 ADCY9O60503 1353 aa16.05■□□□□ 0.16
PCDHGA11-201ENST00000398587 FAM13AO94988 1023 aa16.05■□□□□ 0.16
PCDHGA11-201ENST00000398587 CHRNDQ07001 517 aa16.05■□□□□ 0.16
PCDHGA11-201ENST00000398587 POLD1P28340 1107 aa16.05■□□□□ 0.16
PCDHGA11-201ENST00000398587 ADORA1P30542 326 aa16.05■□□□□ 0.16
PCDHGA11-201ENST00000398587 CUL4AQ13619 759 aa16.05■□□□□ 0.16
PCDHGA11-201ENST00000398587 NONOQ15233 471 aaKnown RBP eCLIP16.05■□□□□ 0.16
PCDHGA11-201ENST00000398587 STK32BQ9NY57 414 aa16.05■□□□□ 0.16
PCDHGA11-201ENST00000398587 NLRP12P59046 1061 aa16.05■□□□□ 0.16
PCDHGA11-201ENST00000398587 PRPF4BQ13523 1007 aaKnown RBP16.05■□□□□ 0.16
PCDHGA11-201ENST00000398587 CCDC65Q8IXS2 484 aa16.05■□□□□ 0.16
PCDHGA11-201ENST00000398587 NEK11Q8NG66 645 aa16.05■□□□□ 0.16
PCDHGA11-201ENST00000398587 TAOK3Q9H2K8 898 aa16.05■□□□□ 0.16
PCDHGA11-201ENST00000398587 ZNF75DP51815 510 aa16.04■□□□□ 0.16
PCDHGA11-201ENST00000398587 CTAGE9A4FU28 777 aa16.04■□□□□ 0.16
PCDHGA11-201ENST00000398587 ADD1P35611 737 aaKnown RBP16.04■□□□□ 0.16
PCDHGA11-201ENST00000398587 IFFO1Q0D2I5 559 aa16.04■□□□□ 0.16
PCDHGA11-201ENST00000398587 TGFBRAP1Q8WUH2 860 aa16.04■□□□□ 0.16
PCDHGA11-201ENST00000398587 USP28Q96RU2 1077 aa16.04■□□□□ 0.16
PCDHGA11-201ENST00000398587 CDC42BPGQ6DT37 1551 aa16.04■□□□□ 0.16
PCDHGA11-201ENST00000398587 USP31Q70CQ4 1352 aa16.04■□□□□ 0.16
PCDHGA11-201ENST00000398587 CYP21A2P08686 494 aa16.04■□□□□ 0.16
PCDHGA11-201ENST00000398587 SPATA31A3Q5VYP0 1347 aa16.04■□□□□ 0.16
PCDHGA11-201ENST00000398587 AKR1B15C9JRZ8 316 aaPredicted RBP16.04■□□□□ 0.16
PCDHGA11-201ENST00000398587 FANCCQ00597 558 aa16.04■□□□□ 0.16
PCDHGA11-201ENST00000398587 ARFGAP3Q9NP61 516 aa16.04■□□□□ 0.16
PCDHGA11-201ENST00000398587 GSTTP1A0A1W2PQM5 241 aa16.03■□□□□ 0.16
PCDHGA11-201ENST00000398587 MACROD2A1Z1Q3 448 aa16.03■□□□□ 0.16
PCDHGA11-201ENST00000398587 POLR3GO15318 223 aaPredicted RBP16.03■□□□□ 0.16
PCDHGA11-201ENST00000398587 ARID4AP29374 1257 aaPredicted RBP16.03■□□□□ 0.16
PCDHGA11-201ENST00000398587 EIF6P56537 245 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms