RNA–Protein interactions for RNA: ENST00000398541.2

RPS4XP3-201, Transcript of ribosomal protein S4X pseudogene 3, humanhuman

BASIC

Gene RPS4XP3, Length 413 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP3-201ENST00000398541 UVSSAQ2YD98 709 aa4.38□□□□□ -1.71
RPS4XP3-201ENST00000398541 SLC51AQ86UW1 340 aa4.38□□□□□ -1.71
RPS4XP3-201ENST00000398541 ARMC10Q8N2F6 343 aa4.38□□□□□ -1.71
RPS4XP3-201ENST00000398541 FAM46AQ96IP4 442 aaKnown RBP4.38□□□□□ -1.71
RPS4XP3-201ENST00000398541 RUSC1Q9BVN2 902 aa4.38□□□□□ -1.71
RPS4XP3-201ENST00000398541 NIF3L1Q9GZT8 377 aa4.38□□□□□ -1.71
RPS4XP3-201ENST00000398541 RNF208Q9H0X6 261 aa4.38□□□□□ -1.71
RPS4XP3-201ENST00000398541 STOML1Q9UBI4 398 aa4.38□□□□□ -1.71
RPS4XP3-201ENST00000398541 GGT7Q9UJ14 662 aa4.38□□□□□ -1.71
RPS4XP3-201ENST00000398541 RNF112Q9ULX5 631 aa4.38□□□□□ -1.71
RPS4XP3-201ENST00000398541 G3BP2Q9UN86 482 aaKnown RBP4.38□□□□□ -1.71
RPS4XP3-201ENST00000398541 A0A1W2PP55 124 aa4.37□□□□□ -1.71
RPS4XP3-201ENST00000398541 SART1O43290 800 aaKnown RBP4.37□□□□□ -1.71
RPS4XP3-201ENST00000398541 CREB3O43889 395 aa4.37□□□□□ -1.71
RPS4XP3-201ENST00000398541 NEFLP07196 543 aa4.37□□□□□ -1.71
RPS4XP3-201ENST00000398541 ESRRAP11474 423 aaPredicted RBP4.37□□□□□ -1.71
RPS4XP3-201ENST00000398541 TBX4P57082 545 aa4.37□□□□□ -1.71
RPS4XP3-201ENST00000398541 IRX6P78412 446 aaPredicted RBP4.37□□□□□ -1.71
RPS4XP3-201ENST00000398541 AMPD3Q01432 767 aa4.37□□□□□ -1.71
RPS4XP3-201ENST00000398541 USPL1Q5W0Q7 1092 aa4.37□□□□□ -1.71
RPS4XP3-201ENST00000398541 ANKRD34AQ69YU3 496 aa4.37□□□□□ -1.71
RPS4XP3-201ENST00000398541 FDX2Q6P4F2 183 aa4.37□□□□□ -1.71
RPS4XP3-201ENST00000398541 APBB1IPQ7Z5R6 666 aaPredicted RBP4.37□□□□□ -1.71
RPS4XP3-201ENST00000398541 GALNT12Q8IXK2 581 aa4.37□□□□□ -1.71
RPS4XP3-201ENST00000398541 RASGRP4Q8TDF6 673 aa4.37□□□□□ -1.71
RPS4XP3-201ENST00000398541 MYRFLQ96LU7 910 aa4.37□□□□□ -1.71
RPS4XP3-201ENST00000398541 USP26Q9BXU7 913 aa4.37□□□□□ -1.71
RPS4XP3-201ENST00000398541 SLKQ9H2G2 1235 aaPredicted RBP4.37□□□□□ -1.71
RPS4XP3-201ENST00000398541 SIRPGQ9P1W8 387 aa4.37□□□□□ -1.71
RPS4XP3-201ENST00000398541 GSC2O15499 205 aa4.36□□□□□ -1.71
RPS4XP3-201ENST00000398541 HYAL3O43820 417 aaPredicted RBP4.36□□□□□ -1.71
RPS4XP3-201ENST00000398541 PDGFRBP09619 1106 aa4.36□□□□□ -1.71
RPS4XP3-201ENST00000398541 EIF4BP23588 611 aaKnown RBP4.36□□□□□ -1.71
RPS4XP3-201ENST00000398541 PREPP48147 710 aa4.36□□□□□ -1.71
RPS4XP3-201ENST00000398541 ORC1Q13415 861 aa4.36□□□□□ -1.71
RPS4XP3-201ENST00000398541 CCNJLQ8IV13 435 aa4.36□□□□□ -1.71
RPS4XP3-201ENST00000398541 TRIM42Q8IWZ5 723 aa4.36□□□□□ -1.71
RPS4XP3-201ENST00000398541 JDP2Q8WYK2 163 aa4.36□□□□□ -1.71
RPS4XP3-201ENST00000398541 CCDC136Q96JN2 1154 aa4.36□□□□□ -1.71
RPS4XP3-201ENST00000398541 CSRNP1Q96S65 589 aa4.36□□□□□ -1.71
RPS4XP3-201ENST00000398541 SRPK1Q96SB4 655 aaKnown RBP4.36□□□□□ -1.71
RPS4XP3-201ENST00000398541 TCF12Q99081 682 aa4.36□□□□□ -1.71
RPS4XP3-201ENST00000398541 UBA5Q9GZZ9 404 aa4.36□□□□□ -1.71
RPS4XP3-201ENST00000398541 SOX17Q9H6I2 414 aaPredicted RBP4.36□□□□□ -1.71
RPS4XP3-201ENST00000398541 LIN7BQ9HAP6 207 aa4.36□□□□□ -1.71
RPS4XP3-201ENST00000398541 SPG7Q9UQ90 795 aa4.36□□□□□ -1.71
RPS4XP3-201ENST00000398541 A0A096LPE4 126 aa4.35□□□□□ -1.71
RPS4XP3-201ENST00000398541 LOC100289279A0A1B0GTE1 492 aa4.35□□□□□ -1.71
RPS4XP3-201ENST00000398541 A0A1W2PPZ6 126 aa4.35□□□□□ -1.71
RPS4XP3-201ENST00000398541 HMX2A2RU54 273 aa4.35□□□□□ -1.71
RPS4XP3-201ENST00000398541 MEGF11A6BM72 1044 aa4.35□□□□□ -1.71
RPS4XP3-201ENST00000398541 PRC1O43663 620 aa4.35□□□□□ -1.71
RPS4XP3-201ENST00000398541 CPNE3O75131 537 aaKnown RBP4.35□□□□□ -1.71
RPS4XP3-201ENST00000398541 CDC45O75419 566 aa4.35□□□□□ -1.71
RPS4XP3-201ENST00000398541 IGLV1-40P01703 118 aa4.35□□□□□ -1.71
RPS4XP3-201ENST00000398541 SSBP05455 408 aaKnown RBP eCLIP4.35□□□□□ -1.71
RPS4XP3-201ENST00000398541 BMP3P12645 472 aa4.35□□□□□ -1.71
RPS4XP3-201ENST00000398541 GRIA4P48058 902 aa4.35□□□□□ -1.71
RPS4XP3-201ENST00000398541 GSTM4Q03013 218 aa4.35□□□□□ -1.71
RPS4XP3-201ENST00000398541 PCDH1Q08174 1060 aa4.35□□□□□ -1.71
RPS4XP3-201ENST00000398541 RASA3Q14644 834 aa4.35□□□□□ -1.71
RPS4XP3-201ENST00000398541 RALBP1Q15311 655 aa4.35□□□□□ -1.71
RPS4XP3-201ENST00000398541 SPRED3Q2MJR0 410 aa4.35□□□□□ -1.71
RPS4XP3-201ENST00000398541 HSP90AB4PQ58FF6 505 aa4.35□□□□□ -1.71
RPS4XP3-201ENST00000398541 KIAA0319Q5VV43 1072 aa4.35□□□□□ -1.71
RPS4XP3-201ENST00000398541 NUTM2GQ5VZR2 741 aa4.35□□□□□ -1.71
RPS4XP3-201ENST00000398541 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.35□□□□□ -1.71
RPS4XP3-201ENST00000398541 NBPF11Q86T75 865 aa4.35□□□□□ -1.71
RPS4XP3-201ENST00000398541 FMNL3Q8IVF7 1028 aa4.35□□□□□ -1.71
RPS4XP3-201ENST00000398541 FAM20CQ8IXL6 584 aa4.35□□□□□ -1.71
RPS4XP3-201ENST00000398541 SEC16BQ96JE7 1060 aa4.35□□□□□ -1.71
RPS4XP3-201ENST00000398541 CLEC4MQ9H2X3 399 aaPredicted RBP4.35□□□□□ -1.71
RPS4XP3-201ENST00000398541 C7orf69Q9H7B7 122 aa4.35□□□□□ -1.71
RPS4XP3-201ENST00000398541 ZNF408Q9H9D4 720 aa4.35□□□□□ -1.71
RPS4XP3-201ENST00000398541 GEMIN8Q9NWZ8 242 aaKnown RBP4.35□□□□□ -1.71
RPS4XP3-201ENST00000398541 SNTG2Q9NY99 539 aa4.35□□□□□ -1.71
RPS4XP3-201ENST00000398541 USP31Q70CQ4 1352 aa4.35□□□□□ -1.71
RPS4XP3-201ENST00000398541 HMGB1P1B2RPK0 211 aaPredicted RBP4.34□□□□□ -1.71
RPS4XP3-201ENST00000398541 EIF1AYO14602 144 aaKnown RBP4.34□□□□□ -1.71
RPS4XP3-201ENST00000398541 GAS2O43903 313 aaKnown RBP4.34□□□□□ -1.71
RPS4XP3-201ENST00000398541 EIF4EBP3O60516 100 aaPredicted RBP4.34□□□□□ -1.71
RPS4XP3-201ENST00000398541 DLGAP3O95886 979 aa4.34□□□□□ -1.71
RPS4XP3-201ENST00000398541 RHBDL3P58872 404 aa4.34□□□□□ -1.71
RPS4XP3-201ENST00000398541 NFIAQ12857 509 aa4.34□□□□□ -1.71
RPS4XP3-201ENST00000398541 ZNF423Q2M1K9 1284 aa4.34□□□□□ -1.71
RPS4XP3-201ENST00000398541 ARSHQ5FYA8 562 aa4.34□□□□□ -1.71
RPS4XP3-201ENST00000398541 ODR4Q5SWX8 454 aa4.34□□□□□ -1.71
RPS4XP3-201ENST00000398541 SPTY2D1Q68D10 685 aaPredicted RBP4.34□□□□□ -1.71
RPS4XP3-201ENST00000398541 RNF43Q68DV7 783 aa4.34□□□□□ -1.71
RPS4XP3-201ENST00000398541 BEND4Q6ZU67 534 aa4.34□□□□□ -1.71
RPS4XP3-201ENST00000398541 ERMP1Q7Z2K6 904 aa4.34□□□□□ -1.71
RPS4XP3-201ENST00000398541 LRP10Q7Z4F1 713 aa4.34□□□□□ -1.71
RPS4XP3-201ENST00000398541 CLEC10AQ8IUN9 316 aa4.34□□□□□ -1.71
RPS4XP3-201ENST00000398541 C12orf50Q8NA57 414 aaPredicted RBP4.34□□□□□ -1.71
RPS4XP3-201ENST00000398541 PRPF38AQ8NAV1 312 aaKnown RBP4.34□□□□□ -1.71
RPS4XP3-201ENST00000398541 DEPDC7Q96QD5 511 aa4.34□□□□□ -1.71
RPS4XP3-201ENST00000398541 FAM83CQ9BQN1 747 aa4.34□□□□□ -1.71
RPS4XP3-201ENST00000398541 TMPRSS13Q9BYE2 586 aa4.34□□□□□ -1.71
RPS4XP3-201ENST00000398541 PCGF6Q9BYE7 350 aa4.34□□□□□ -1.71
RPS4XP3-201ENST00000398541 EHD4Q9H223 541 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms