RNA–Protein interactions for RNA: ENST00000398527.6

MSL3-207, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-207ENST00000398527 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.4□□□□□ -0.422e-8■■■■■ 35.5
MSL3-207ENST00000398527 ZDHHC9Q9Y397 364 aa12.4□□□□□ -0.42
MSL3-207ENST00000398527 SBF1O95248 1867 aa12.4□□□□□ -0.42
MSL3-207ENST00000398527 MLLT1Q03111 559 aaPredicted RBP12.4□□□□□ -0.42
MSL3-207ENST00000398527 MCM6Q14566 821 aa12.4□□□□□ -0.42
MSL3-207ENST00000398527 MCTP2Q6DN12 878 aa12.4□□□□□ -0.42
MSL3-207ENST00000398527 CC2D1AQ6P1N0 951 aaPredicted RBP12.4□□□□□ -0.42
MSL3-207ENST00000398527 PPP1R42Q7Z4L9 355 aa12.4□□□□□ -0.42
MSL3-207ENST00000398527 ERC1Q8IUD2 1116 aa12.4□□□□□ -0.42
MSL3-207ENST00000398527 MRRFQ96E11 262 aaKnown RBP12.4□□□□□ -0.42
MSL3-207ENST00000398527 ABHD8Q96I13 439 aa12.4□□□□□ -0.42
MSL3-207ENST00000398527 CPSF2Q9P2I0 782 aaKnown RBP12.4□□□□□ -0.42
MSL3-207ENST00000398527 KCNQ3O43525 872 aa12.39□□□□□ -0.43
MSL3-207ENST00000398527 NEK4P51957 841 aa12.39□□□□□ -0.43
MSL3-207ENST00000398527 TSGA10IPQ3SY00 556 aa12.39□□□□□ -0.43
MSL3-207ENST00000398527 CCDC178Q5BJE1 867 aa12.39□□□□□ -0.43
MSL3-207ENST00000398527 MYO1HQ8N1T3 1032 aa12.39□□□□□ -0.43
MSL3-207ENST00000398527 PHAXQ9H814 394 aaKnown RBP12.39□□□□□ -0.43
MSL3-207ENST00000398527 CCDC87Q9NVE4 849 aa12.39□□□□□ -0.43
MSL3-207ENST00000398527 C4AP0C0L4 1744 aa12.39□□□□□ -0.43
MSL3-207ENST00000398527 SGSM2O43147 1006 aa12.39□□□□□ -0.43
MSL3-207ENST00000398527 VEGFAP15692 232 aaPredicted RBP12.39□□□□□ -0.43
MSL3-207ENST00000398527 EIF2S2P20042 333 aaKnown RBP12.39□□□□□ -0.43
MSL3-207ENST00000398527 KCNA3P22001 575 aa12.39□□□□□ -0.43
MSL3-207ENST00000398527 FXNQ16595 210 aa12.39□□□□□ -0.43
MSL3-207ENST00000398527 CNTROBQ8N137 903 aa12.39□□□□□ -0.43
MSL3-207ENST00000398527 RAPGEF4Q8WZA2 1011 aa12.39□□□□□ -0.43
MSL3-207ENST00000398527 MUC3BQ9H195 1237 aa12.39□□□□□ -0.43
MSL3-207ENST00000398527 ECM2O94769 699 aaPredicted RBP12.38□□□□□ -0.43
MSL3-207ENST00000398527 IMPDH2P12268 514 aa12.38□□□□□ -0.43
MSL3-207ENST00000398527 TATP17735 454 aaPredicted RBP12.38□□□□□ -0.43
MSL3-207ENST00000398527 MSNP26038 577 aaKnown RBP12.38□□□□□ -0.43
MSL3-207ENST00000398527 CHAF1AQ13111 956 aaPredicted RBP12.38□□□□□ -0.43
MSL3-207ENST00000398527 CCDC73Q6ZRK6 1079 aa12.38□□□□□ -0.43
MSL3-207ENST00000398527 LINC00116Q8NCU8 138 aa12.38□□□□□ -0.43
MSL3-207ENST00000398527 KCNB2Q92953 911 aa12.38□□□□□ -0.43
MSL3-207ENST00000398527 SCYL1Q96KG9 808 aa12.38□□□□□ -0.43
MSL3-207ENST00000398527 TRERF1Q96PN7 1200 aa12.38□□□□□ -0.43
MSL3-207ENST00000398527 CDC5LQ99459 802 aaKnown RBP12.38□□□□□ -0.43
MSL3-207ENST00000398527 FEZ1Q99689 392 aa12.38□□□□□ -0.43
MSL3-207ENST00000398527 CREBZFQ9NS37 354 aa12.38□□□□□ -0.43
MSL3-207ENST00000398527 MKS1Q9NXB0 559 aa12.38□□□□□ -0.43
MSL3-207ENST00000398527 SPG7Q9UQ90 795 aa12.38□□□□□ -0.43
MSL3-207ENST00000398527 GLRX3O76003 335 aaKnown RBP12.38□□□□□ -0.43
MSL3-207ENST00000398527 VCAM1P19320 739 aa12.38□□□□□ -0.43
MSL3-207ENST00000398527 ATICP31939 592 aa12.38□□□□□ -0.43
MSL3-207ENST00000398527 MAP2K2P36507 400 aa12.38□□□□□ -0.43
MSL3-207ENST00000398527 RGS19P49795 217 aa12.38□□□□□ -0.43
MSL3-207ENST00000398527 SART3Q15020 963 aaKnown RBP12.38□□□□□ -0.43
MSL3-207ENST00000398527 TSR1Q2NL82 804 aaKnown RBP12.38□□□□□ -0.43
MSL3-207ENST00000398527 CCDC92Q53HC0 331 aaPredicted RBP12.38□□□□□ -0.43
MSL3-207ENST00000398527 MCTP1Q6DN14 999 aa12.38□□□□□ -0.43
MSL3-207ENST00000398527 ZGPATQ8N5A5 531 aaKnown RBP12.38□□□□□ -0.43
MSL3-207ENST00000398527 AIDAQ96BJ3 306 aa12.38□□□□□ -0.43
MSL3-207ENST00000398527 MKRN1Q9UHC7 482 aaKnown RBP12.38□□□□□ -0.43
MSL3-207ENST00000398527 N6AMT1Q9Y5N5 214 aa12.38□□□□□ -0.43
MSL3-207ENST00000398527 MRC1P22897 1456 aa12.38□□□□□ -0.43
MSL3-207ENST00000398527 SURF6O75683 361 aaKnown RBP12.37□□□□□ -0.43
MSL3-207ENST00000398527 CDKL5O76039 1030 aa12.37□□□□□ -0.43
MSL3-207ENST00000398527 TBC1D25Q3MII6 688 aa12.37□□□□□ -0.43
MSL3-207ENST00000398527 KSR2Q6VAB6 950 aa12.37□□□□□ -0.43
MSL3-207ENST00000398527 ANO2Q9NQ90 1003 aa12.37□□□□□ -0.43
MSL3-207ENST00000398527 HYPKQ9NX55 129 aa12.37□□□□□ -0.43
MSL3-207ENST00000398527 PIM2Q9P1W9 311 aa12.37□□□□□ -0.43
MSL3-207ENST00000398527 USP25Q9UHP3 1055 aa12.37□□□□□ -0.43
MSL3-207ENST00000398527 ITGB4P16144 1822 aa12.37□□□□□ -0.43
MSL3-207ENST00000398527 COL15A1P39059 1388 aa12.37□□□□□ -0.43
MSL3-207ENST00000398527 SPDYE4A6NLX3 237 aa12.37□□□□□ -0.43
MSL3-207ENST00000398527 GNPATO15228 680 aa12.37□□□□□ -0.43
MSL3-207ENST00000398527 SRGAP3O43295 1099 aa12.37□□□□□ -0.43
MSL3-207ENST00000398527 TCF3P15923 654 aa12.37□□□□□ -0.43
MSL3-207ENST00000398527 DALRD3Q5D0E6 543 aaKnown RBP12.37□□□□□ -0.43
MSL3-207ENST00000398527 ZNF710Q8N1W2 664 aa12.37□□□□□ -0.43
MSL3-207ENST00000398527 TMEM87AQ8NBN3 555 aa12.37□□□□□ -0.43
MSL3-207ENST00000398527 IFT122Q9HBG6 1241 aa12.37□□□□□ -0.43
MSL3-207ENST00000398527 SNRKQ9NRH2 765 aa12.37□□□□□ -0.43
MSL3-207ENST00000398527 KDM6AO15550 1401 aaPredicted RBP12.36□□□□□ -0.43
MSL3-207ENST00000398527 PI4KAP2A4QPH2 592 aa12.36□□□□□ -0.43
MSL3-207ENST00000398527 BOLA2-SMG1P6H3BVE0 249 aa12.36□□□□□ -0.43
MSL3-207ENST00000398527 NASPP49321 788 aaPredicted RBP12.36□□□□□ -0.43
MSL3-207ENST00000398527 ZSCAN23Q3MJ62 389 aa12.36□□□□□ -0.43
MSL3-207ENST00000398527 MYSM1Q5VVJ2 828 aa12.36□□□□□ -0.43
MSL3-207ENST00000398527 RPUSD2Q8IZ73 545 aaKnown RBP12.36□□□□□ -0.43
MSL3-207ENST00000398527 NLGN1Q8N2Q7 840 aa12.36□□□□□ -0.43
MSL3-207ENST00000398527 PI4KAP1Q8N8J0 262 aa12.36□□□□□ -0.43
MSL3-207ENST00000398527 TRIML1Q8N9V2 468 aa12.36□□□□□ -0.43
MSL3-207ENST00000398527 ANKRD20A12PQ8NF67 263 aa12.36□□□□□ -0.43
MSL3-207ENST00000398527 RUFY2Q8WXA3 655 aa12.36□□□□□ -0.43
MSL3-207ENST00000398527 RILPL2Q969X0 211 aa12.36□□□□□ -0.43
MSL3-207ENST00000398527 TMEM63CQ9P1W3 806 aa12.36□□□□□ -0.43
MSL3-207ENST00000398527 AKAP2Q9Y2D5 859 aa12.36□□□□□ -0.43
MSL3-207ENST00000398527 ZNF132P52740 706 aa12.36□□□□□ -0.43
MSL3-207ENST00000398527 PRPF4BQ13523 1007 aaKnown RBP12.36□□□□□ -0.43
MSL3-207ENST00000398527 PDCD2Q16342 344 aaPredicted RBP12.36□□□□□ -0.43
MSL3-207ENST00000398527 FMNL3Q8IVF7 1028 aa12.36□□□□□ -0.43
MSL3-207ENST00000398527 CCDC26Q8TAB7 109 aa12.36□□□□□ -0.43
MSL3-207ENST00000398527 TM6SF1Q9BZW5 370 aa12.36□□□□□ -0.43
MSL3-207ENST00000398527 PALD1Q9ULE6 856 aa12.36□□□□□ -0.43
MSL3-207ENST00000398527 CNTNAP1P78357 1384 aa12.35□□□□□ -0.43
MSL3-207ENST00000398527 GLTPD2A6NH11 291 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms