RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 PIK3C2BO00750 1634 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 PRAG1Q86YV5 1406 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 PRPF6O94906 941 aaKnown RBP3.06□□□□□ -1.92
CHD9-202ENST00000398510 CA8P35219 290 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 PPP2R5AQ15172 486 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 CFAP100Q494V2 611 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 KIRREL3Q8IZU9 778 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 MAK16Q9BXY0 300 aaKnown RBP3.06□□□□□ -1.92
CHD9-202ENST00000398510 TSPY26PQ9H489 355 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 FAM50BQ9Y247 325 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 MON2Q7Z3U7 1717 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 AOX1Q06278 1338 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 KIDINS220Q9ULH0 1771 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 ZNF213O14771 459 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 B4GALNT3Q6L9W6 998 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 C1orf228Q6PIY5 440 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 SMARCAL1Q9NZC9 954 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 SHPRHQ149N8 1683 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 H0YIN7 160 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 NOP56O00567 594 aaKnown RBP3.06□□□□□ -1.92
CHD9-202ENST00000398510 PLIN1O60240 522 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 KDM1AO60341 852 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 GIGYF1O75420 1035 aaPredicted RBP3.06□□□□□ -1.92
CHD9-202ENST00000398510 IDH1O75874 414 aaKnown RBP3.06□□□□□ -1.92
CHD9-202ENST00000398510 GNAT1P11488 350 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 MX1P20591 662 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 IL15P40933 162 aaPredicted RBP3.06□□□□□ -1.92
CHD9-202ENST00000398510 XPCQ01831 940 aaPredicted RBP3.06□□□□□ -1.92
CHD9-202ENST00000398510 INF2Q27J81 1249 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 IFIT1BQ5T764 474 aaKnown RBP3.06□□□□□ -1.92
CHD9-202ENST00000398510 FAM177A1Q8N128 213 aaPredicted RBP3.06□□□□□ -1.92
CHD9-202ENST00000398510 LEO1Q8WVC0 666 aaPredicted RBP3.06□□□□□ -1.92
CHD9-202ENST00000398510 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.06□□□□□ -1.92
CHD9-202ENST00000398510 SMC6Q96SB8 1091 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 UPF3BQ9BZI7 483 aaKnown RBP3.06□□□□□ -1.92
CHD9-202ENST00000398510 NACA2Q9H009 215 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 AZI2Q9H6S1 392 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 IFT122Q9HBG6 1241 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 TFCP2L1Q9NZI6 479 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 STK39Q9UEW8 545 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 ZMYM2Q9UBW7 1377 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 RGPD5Q99666 1765 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 SSH2Q76I76 1423 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 IVLP07476 585 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 LMAN1P49257 510 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 MRE11P49959 708 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 TRPC3Q13507 836 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 PPP2R5DQ14738 602 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 WDR44Q5JSH3 913 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 GALNT17Q6IS24 598 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 FAM196AQ6ZSG2 479 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 SULF1Q8IWU6 871 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 SRRM1Q8IYB3 904 aaKnown RBP3.06□□□□□ -1.92
CHD9-202ENST00000398510 DCPSQ96C86 337 aaKnown RBP3.06□□□□□ -1.92
CHD9-202ENST00000398510 PCDHB8Q9UN66 801 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 PCDHB13Q9Y5F0 798 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 METP08581 1390 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 NWD2Q9ULI1 1742 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 BCRP11274 1271 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 CKAP2LQ8IYA6 745 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 OSCP1Q8WVF1 389 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 CPLX3Q8WVH0 158 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 CTNNBL1Q8WYA6 563 aaPredicted RBP3.06□□□□□ -1.92
CHD9-202ENST00000398510 TIGD1Q96MW7 591 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 BCCIPQ9P287 314 aaKnown RBP eCLIP3.06□□□□□ -1.92
CHD9-202ENST00000398510 SH3TC1Q8TE82 1336 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 EFCAB14O75071 495 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 PHACTR2O75167 634 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 SLC4A2P04920 1241 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 STMN1P16949 149 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 MAIP1Q8WWC4 291 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 IFT81Q8WYA0 676 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 CACNA1SQ13698 1873 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 SBNO2Q9Y2G9 1366 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 KRT86O43790 486 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 SURF6O75683 361 aaKnown RBP3.05□□□□□ -1.92
CHD9-202ENST00000398510 WAPLQ7Z5K2 1190 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 RNF34Q969K3 372 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 GCNAQ96QF7 691 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 CSRNP1Q96S65 589 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 ABCF2Q9UG63 623 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 MARF1Q9Y4F3 1742 aaKnown RBP3.05□□□□□ -1.92
CHD9-202ENST00000398510 ACTN4O43707 911 aaKnown RBP3.05□□□□□ -1.92
CHD9-202ENST00000398510 ZSCAN20P17040 1043 aaPredicted RBP3.05□□□□□ -1.92
CHD9-202ENST00000398510 LMNB1P20700 586 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 AKNAD1Q5T1N1 836 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 NEK11Q8NG66 645 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 PPP1R14CQ8TAE6 165 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 CABP1Q9NZU7 370 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 TSKSQ9UJT2 592 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 ABCC6O95255 1503 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 IREB2P48200 963 aaKnown RBP3.05□□□□□ -1.92
CHD9-202ENST00000398510 SLC27A3Q5K4L6 730 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 C8orf76Q96K31 380 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 VCX3BQ9H321 246 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 RGPD8O14715 1765 aaPredicted RBP3.05□□□□□ -1.92
CHD9-202ENST00000398510 NCOA3Q9Y6Q9 1424 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 NOL3O60936 208 aaKnown RBP3.05□□□□□ -1.92
CHD9-202ENST00000398510 MAP2K1Q02750 393 aaPredicted RBP3.05□□□□□ -1.92
CHD9-202ENST00000398510 TRAPPC3LQ5T215 181 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms