RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 MAGEB6Q8N7X4 407 aa12.63□□□□□ -0.39
CSGALNACT1-202ENST00000397998 ALDH8A1Q9H2A2 487 aaPredicted RBP12.63□□□□□ -0.39
CSGALNACT1-202ENST00000397998 VWA3AA6NCI4 1184 aa12.63□□□□□ -0.39
CSGALNACT1-202ENST00000397998 RAD21O60216 631 aa12.63□□□□□ -0.39
CSGALNACT1-202ENST00000397998 MBD4O95243 580 aa12.63□□□□□ -0.39
CSGALNACT1-202ENST00000397998 CTDSPL2Q05D32 466 aa12.63□□□□□ -0.39
CSGALNACT1-202ENST00000397998 GRAMD1CQ8IYS0 662 aa12.63□□□□□ -0.39
CSGALNACT1-202ENST00000397998 TRIM47Q96LD4 638 aa12.63□□□□□ -0.39
CSGALNACT1-202ENST00000397998 PARD6BQ9BYG5 372 aa12.63□□□□□ -0.39
CSGALNACT1-202ENST00000397998 MCM3P25205 808 aa12.62□□□□□ -0.39
CSGALNACT1-202ENST00000397998 UBXN1Q04323 297 aa12.62□□□□□ -0.39
CSGALNACT1-202ENST00000397998 ZNF174Q15697 407 aa12.62□□□□□ -0.39
CSGALNACT1-202ENST00000397998 SLC4A8Q2Y0W8 1093 aa12.62□□□□□ -0.39
CSGALNACT1-202ENST00000397998 AMOTL1Q8IY63 956 aa12.62□□□□□ -0.39
CSGALNACT1-202ENST00000397998 TMEM87BQ96K49 555 aa12.62□□□□□ -0.39
CSGALNACT1-202ENST00000397998 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.62□□□□□ -0.39
CSGALNACT1-202ENST00000397998 SH3TC1Q8TE82 1336 aa12.62□□□□□ -0.39
CSGALNACT1-202ENST00000397998 A0A0G2JLW4 131 aa12.62□□□□□ -0.39
CSGALNACT1-202ENST00000397998 SHTN1A0MZ66 631 aa12.62□□□□□ -0.39
CSGALNACT1-202ENST00000397998 STX10O60499 249 aa12.62□□□□□ -0.39
CSGALNACT1-202ENST00000397998 LONRF2Q1L5Z9 754 aa12.62□□□□□ -0.39
CSGALNACT1-202ENST00000397998 VSTM4Q8IW00 320 aa12.62□□□□□ -0.39
CSGALNACT1-202ENST00000397998 DPF2Q92785 391 aa12.62□□□□□ -0.39
CSGALNACT1-202ENST00000397998 NAPGQ99747 312 aaPredicted RBP12.62□□□□□ -0.39
CSGALNACT1-202ENST00000397998 SLF1Q9BQI6 1058 aa12.62□□□□□ -0.39
CSGALNACT1-202ENST00000397998 CNNM2Q9H8M5 875 aa12.62□□□□□ -0.39
CSGALNACT1-202ENST00000397998 PDE11AQ9HCR9 933 aa12.62□□□□□ -0.39
CSGALNACT1-202ENST00000397998 DLC1Q96QB1 1528 aa12.62□□□□□ -0.39
CSGALNACT1-202ENST00000397998 MTIF2P46199 727 aaKnown RBP12.62□□□□□ -0.39
CSGALNACT1-202ENST00000397998 KCNB2Q92953 911 aa12.62□□□□□ -0.39
CSGALNACT1-202ENST00000397998 CDK5RAP3Q96JB5 506 aa12.62□□□□□ -0.39
CSGALNACT1-202ENST00000397998 GNL3LQ9NVN8 582 aaKnown RBP12.62□□□□□ -0.39
CSGALNACT1-202ENST00000397998 CTNND2Q9UQB3 1225 aa12.62□□□□□ -0.39
CSGALNACT1-202ENST00000397998 SYNRGQ9UMZ2 1314 aa12.62□□□□□ -0.39
CSGALNACT1-202ENST00000397998 RBM43Q6ZSC3 357 aaKnown RBP12.62□□□□□ -0.39
CSGALNACT1-202ENST00000397998 RABEP2Q9H5N1 569 aa12.62□□□□□ -0.39
CSGALNACT1-202ENST00000397998 CDC42BPGQ6DT37 1551 aa12.61□□□□□ -0.39
CSGALNACT1-202ENST00000397998 COBLO75128 1261 aa12.61□□□□□ -0.39
CSGALNACT1-202ENST00000397998 KRT9P35527 623 aa12.61□□□□□ -0.39
CSGALNACT1-202ENST00000397998 SPAG1Q07617 926 aa12.61□□□□□ -0.39
CSGALNACT1-202ENST00000397998 ENOX2Q16206 610 aaKnown RBP12.61□□□□□ -0.39
CSGALNACT1-202ENST00000397998 DNAJC21Q5F1R6 531 aaKnown RBP12.61□□□□□ -0.39
CSGALNACT1-202ENST00000397998 NBPF11Q86T75 865 aa12.61□□□□□ -0.39
CSGALNACT1-202ENST00000397998 RABGGTAQ92696 567 aa12.61□□□□□ -0.39
CSGALNACT1-202ENST00000397998 MED23Q9ULK4 1368 aa12.61□□□□□ -0.39
CSGALNACT1-202ENST00000397998 NRKQ7Z2Y5 1582 aa12.61□□□□□ -0.39
CSGALNACT1-202ENST00000397998 CTDNEP1O95476 244 aa12.61□□□□□ -0.39
CSGALNACT1-202ENST00000397998 UQCRFS1P1P0C7P4 283 aa12.61□□□□□ -0.39
CSGALNACT1-202ENST00000397998 IBSPP21815 317 aaPredicted RBP12.61□□□□□ -0.39
CSGALNACT1-202ENST00000397998 IGHMBP2P38935 993 aaKnown RBP12.61□□□□□ -0.39
CSGALNACT1-202ENST00000397998 UBA7P41226 1012 aa12.61□□□□□ -0.39
CSGALNACT1-202ENST00000397998 NOSTRINQ8IVI9 506 aa12.61□□□□□ -0.39
CSGALNACT1-202ENST00000397998 PUS7LQ9H0K6 701 aaKnown RBP12.61□□□□□ -0.39
CSGALNACT1-202ENST00000397998 ARMT1Q9H993 441 aa12.61□□□□□ -0.39
CSGALNACT1-202ENST00000397998 SAMSN1Q9NSI8 373 aaKnown RBP12.61□□□□□ -0.39
CSGALNACT1-202ENST00000397998 TAB2Q9NYJ8 693 aa12.61□□□□□ -0.39
CSGALNACT1-202ENST00000397998 EPS15P42566 896 aa12.61□□□□□ -0.39
CSGALNACT1-202ENST00000397998 USPL1Q5W0Q7 1092 aa12.61□□□□□ -0.39
CSGALNACT1-202ENST00000397998 ZNF532Q9HCE3 1301 aa12.61□□□□□ -0.39
CSGALNACT1-202ENST00000397998 PHKG2P15735 406 aa12.6□□□□□ -0.39
CSGALNACT1-202ENST00000397998 CCDC122Q5T0U0 273 aa12.6□□□□□ -0.39
CSGALNACT1-202ENST00000397998 PLIN2Q99541 437 aa12.6□□□□□ -0.39
CSGALNACT1-202ENST00000397998 BRD3Q15059 726 aa12.6□□□□□ -0.39
CSGALNACT1-202ENST00000397998 APOA5Q6Q788 366 aa12.6□□□□□ -0.39
CSGALNACT1-202ENST00000397998 TMTC2Q8N394 836 aa12.6□□□□□ -0.39
CSGALNACT1-202ENST00000397998 ENGASEQ8NFI3 743 aa12.6□□□□□ -0.39
CSGALNACT1-202ENST00000397998 ZCRB1Q8TBF4 217 aaKnown RBP12.6□□□□□ -0.39
CSGALNACT1-202ENST00000397998 KAZALD1Q96I82 304 aa12.6□□□□□ -0.39
CSGALNACT1-202ENST00000397998 LUC7L2Q9Y383 392 aaKnown RBP12.6□□□□□ -0.39
CSGALNACT1-202ENST00000397998 CCDC194A0A1B0GVG4 234 aa12.6□□□□□ -0.39
CSGALNACT1-202ENST00000397998 ZNF609O15014 1411 aa12.6□□□□□ -0.39
CSGALNACT1-202ENST00000397998 ZMYM6O95789 1325 aa12.6□□□□□ -0.39
CSGALNACT1-202ENST00000397998 CYP7A1P22680 504 aa12.6□□□□□ -0.39
CSGALNACT1-202ENST00000397998 PAFAH1B1P43034 410 aa12.6□□□□□ -0.39
CSGALNACT1-202ENST00000397998 GTF2A1P52655 376 aaPredicted RBP12.6□□□□□ -0.39
CSGALNACT1-202ENST00000397998 ARHGEF25Q86VW2 580 aa12.6□□□□□ -0.39
CSGALNACT1-202ENST00000397998 MICALL1Q8N3F8 863 aa12.6□□□□□ -0.39
CSGALNACT1-202ENST00000397998 C19orf44Q9H6X5 657 aa12.6□□□□□ -0.39
CSGALNACT1-202ENST00000397998 TTF2Q9UNY4 1162 aaKnown RBP12.6□□□□□ -0.39
CSGALNACT1-202ENST00000397998 SOWAHDA6NJG2 315 aa12.59□□□□□ -0.39
CSGALNACT1-202ENST00000397998 PATL2C9JE40 543 aaKnown RBP12.59□□□□□ -0.39
CSGALNACT1-202ENST00000397998 USO1O60763 962 aaKnown RBP12.59□□□□□ -0.39
CSGALNACT1-202ENST00000397998 SSBP05455 408 aaKnown RBP eCLIP12.59□□□□□ -0.39
CSGALNACT1-202ENST00000397998 MCM7P33993 719 aa12.59□□□□□ -0.39
CSGALNACT1-202ENST00000397998 FKBP15Q5T1M5 1219 aa12.59□□□□□ -0.39
CSGALNACT1-202ENST00000397998 IFIT1BQ5T764 474 aaKnown RBP12.59□□□□□ -0.39
CSGALNACT1-202ENST00000397998 ESR2Q92731 530 aa12.59□□□□□ -0.39
CSGALNACT1-202ENST00000397998 KAT6BQ8WYB5 2073 aa12.59□□□□□ -0.39
CSGALNACT1-202ENST00000397998 DEXIO95424 95 aa12.59□□□□□ -0.39
CSGALNACT1-202ENST00000397998 ITGA6P23229 1130 aa12.59□□□□□ -0.39
CSGALNACT1-202ENST00000397998 RDXP35241 583 aaKnown RBP12.59□□□□□ -0.39
CSGALNACT1-202ENST00000397998 STAT6P42226 847 aa12.59□□□□□ -0.39
CSGALNACT1-202ENST00000397998 FCHSD1Q86WN1 690 aa12.59□□□□□ -0.39
CSGALNACT1-202ENST00000397998 BLZF1Q9H2G9 400 aa12.59□□□□□ -0.39
CSGALNACT1-202ENST00000397998 PLEKHG1Q9ULL1 1385 aa12.59□□□□□ -0.39
CSGALNACT1-202ENST00000397998 KIF28PB7ZC32 967 aa12.59□□□□□ -0.39
CSGALNACT1-202ENST00000397998 CCDC96Q2M329 555 aa12.59□□□□□ -0.39
CSGALNACT1-202ENST00000397998 TDRD12Q587J7 1177 aaKnown RBP12.59□□□□□ -0.39
CSGALNACT1-202ENST00000397998 TOGARAM2Q6ZUX3 1019 aa12.59□□□□□ -0.39
CSGALNACT1-202ENST00000397998 SMYD4Q8IYR2 804 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms