RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 PWP2Q15269 919 aaKnown RBP4.7□□□□□ -1.66
UBE3A-202ENST00000397954 DNAAF4Q8WXU2 420 aa4.7□□□□□ -1.66
UBE3A-202ENST00000397954 RNF34Q969K3 372 aa4.7□□□□□ -1.66
UBE3A-202ENST00000397954 VTI1BQ9UEU0 232 aa4.7□□□□□ -1.66
UBE3A-202ENST00000397954 XDHP47989 1333 aa4.69□□□□□ -1.66
UBE3A-202ENST00000397954 GLTPD2A6NH11 291 aa4.69□□□□□ -1.66
UBE3A-202ENST00000397954 SORBS3O60504 671 aa4.69□□□□□ -1.66
UBE3A-202ENST00000397954 CIAO1O76071 339 aa4.69□□□□□ -1.66
UBE3A-202ENST00000397954 A1BGP04217 495 aa4.69□□□□□ -1.66
UBE3A-202ENST00000397954 MPSTP25325 297 aa4.69□□□□□ -1.66
UBE3A-202ENST00000397954 APLP1P51693 650 aa4.69□□□□□ -1.66
UBE3A-202ENST00000397954 MTX1Q13505 466 aa4.69□□□□□ -1.66
UBE3A-202ENST00000397954 PTPROQ16827 1216 aa4.69□□□□□ -1.66
UBE3A-202ENST00000397954 RABL6Q3YEC7 729 aaPredicted RBP4.69□□□□□ -1.66
UBE3A-202ENST00000397954 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.69□□□□□ -1.66
UBE3A-202ENST00000397954 SMC1BQ8NDV3 1235 aa4.69□□□□□ -1.66
UBE3A-202ENST00000397954 AGBL3Q8NEM8 1001 aa4.69□□□□□ -1.66
UBE3A-202ENST00000397954 XAGE3Q8WTP9 111 aa4.69□□□□□ -1.66
UBE3A-202ENST00000397954 UBE2Q2Q8WVN8 375 aa4.69□□□□□ -1.66
UBE3A-202ENST00000397954 BSDC1Q9NW68 430 aaPredicted RBP4.69□□□□□ -1.66
UBE3A-202ENST00000397954 LHX6Q9UPM6 363 aa4.69□□□□□ -1.66
UBE3A-202ENST00000397954 NOD1Q9Y239 953 aa4.69□□□□□ -1.66
UBE3A-202ENST00000397954 RIPOR2Q9Y4F9 1068 aa4.69□□□□□ -1.66
UBE3A-202ENST00000397954 MAST3O60307 1309 aa4.69□□□□□ -1.66
UBE3A-202ENST00000397954 UBN2Q6ZU65 1347 aa4.69□□□□□ -1.66
UBE3A-202ENST00000397954 MROH5Q6ZUA9 1318 aa4.69□□□□□ -1.66
UBE3A-202ENST00000397954 hCG_2014768A0A024R1R8 64 aa4.69□□□□□ -1.66
UBE3A-202ENST00000397954 ZNF76P36508 570 aa4.69□□□□□ -1.66
UBE3A-202ENST00000397954 IARSP41252 1262 aaKnown RBP4.69□□□□□ -1.66
UBE3A-202ENST00000397954 ATP1A2P50993 1020 aa4.69□□□□□ -1.66
UBE3A-202ENST00000397954 RACK1P63244 317 aaKnown RBP4.69□□□□□ -1.66
UBE3A-202ENST00000397954 FKBP1BP68106 108 aa4.69□□□□□ -1.66
UBE3A-202ENST00000397954 IRX6P78412 446 aaPredicted RBP4.69□□□□□ -1.66
UBE3A-202ENST00000397954 KIAA2012Q0VF49 1180 aa4.69□□□□□ -1.66
UBE3A-202ENST00000397954 COPS6Q7L5N1 327 aa4.69□□□□□ -1.66
UBE3A-202ENST00000397954 HOOK2Q96ED9 719 aa4.69□□□□□ -1.66
UBE3A-202ENST00000397954 CHPF2Q9P2E5 772 aa4.69□□□□□ -1.66
UBE3A-202ENST00000397954 PGAP2Q9UHJ9 254 aa4.69□□□□□ -1.66
UBE3A-202ENST00000397954 TOMM70O94826 608 aa4.68□□□□□ -1.66
UBE3A-202ENST00000397954 GNAI3P08754 354 aa4.68□□□□□ -1.66
UBE3A-202ENST00000397954 GTF2E1P29083 439 aaPredicted RBP4.68□□□□□ -1.66
UBE3A-202ENST00000397954 CTSWP56202 376 aa4.68□□□□□ -1.66
UBE3A-202ENST00000397954 EIF6P56537 245 aaKnown RBP4.68□□□□□ -1.66
UBE3A-202ENST00000397954 DESI1Q6ICB0 168 aa4.68□□□□□ -1.66
UBE3A-202ENST00000397954 PRPF40BQ6NWY9 871 aaKnown RBP4.68□□□□□ -1.66
UBE3A-202ENST00000397954 BLOC1S3Q6QNY0 202 aa4.68□□□□□ -1.66
UBE3A-202ENST00000397954 RBCK1Q9BYM8 510 aa4.68□□□□□ -1.66
UBE3A-202ENST00000397954 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.68□□□□□ -1.66
UBE3A-202ENST00000397954 ABCC4O15439 1325 aa4.68□□□□□ -1.66
UBE3A-202ENST00000397954 DDX60LQ5H9U9 1706 aaKnown RBP4.68□□□□□ -1.66
UBE3A-202ENST00000397954 NEURL1BA8MQ27 555 aa4.68□□□□□ -1.66
UBE3A-202ENST00000397954 GPR182O15218 404 aa4.68□□□□□ -1.66
UBE3A-202ENST00000397954 NPHP1O15259 732 aa4.68□□□□□ -1.66
UBE3A-202ENST00000397954 RNF40O75150 1001 aa4.68□□□□□ -1.66
UBE3A-202ENST00000397954 IGHA2P01877 340 aa4.68□□□□□ -1.66
UBE3A-202ENST00000397954 EVX2Q03828 476 aa4.68□□□□□ -1.66
UBE3A-202ENST00000397954 INTS3Q68E01 1043 aaKnown RBP4.68□□□□□ -1.66
UBE3A-202ENST00000397954 PODNQ7Z5L7 613 aa4.68□□□□□ -1.66
UBE3A-202ENST00000397954 LDHDQ86WU2 507 aa4.68□□□□□ -1.66
UBE3A-202ENST00000397954 ADAM32Q8TC27 787 aa4.68□□□□□ -1.66
UBE3A-202ENST00000397954 GPR108Q9NPR9 543 aa4.68□□□□□ -1.66
UBE3A-202ENST00000397954 KIAA1468Q9P260 1216 aa4.68□□□□□ -1.66
UBE3A-202ENST00000397954 SRP68Q9UHB9 627 aaKnown RBP4.68□□□□□ -1.66
UBE3A-202ENST00000397954 MYH7P12883 1935 aa4.68□□□□□ -1.66
UBE3A-202ENST00000397954 PTPREP23469 700 aa4.67□□□□□ -1.66
UBE3A-202ENST00000397954 WEE1P30291 646 aa4.67□□□□□ -1.66
UBE3A-202ENST00000397954 EHHADHQ08426 723 aa4.67□□□□□ -1.66
UBE3A-202ENST00000397954 TRIM50Q86XT4 487 aa4.67□□□□□ -1.66
UBE3A-202ENST00000397954 KCNB2Q92953 911 aa4.67□□□□□ -1.66
UBE3A-202ENST00000397954 COA1Q9GZY4 146 aa4.67□□□□□ -1.66
UBE3A-202ENST00000397954 BCL11AQ9H165 835 aa4.67□□□□□ -1.66
UBE3A-202ENST00000397954 PRDM16Q9HAZ2 1276 aa4.67□□□□□ -1.66
UBE3A-202ENST00000397954 TRMT112Q9UI30 125 aaKnown RBP4.67□□□□□ -1.66
UBE3A-202ENST00000397954 RBBP6Q7Z6E9 1792 aaKnown RBP4.67□□□□□ -1.66
UBE3A-202ENST00000397954 SALL1Q9NSC2 1324 aa4.67□□□□□ -1.66
UBE3A-202ENST00000397954 KCNQ3O43525 872 aa4.67□□□□□ -1.66
UBE3A-202ENST00000397954 VEGFAP15692 232 aaPredicted RBP4.67□□□□□ -1.66
UBE3A-202ENST00000397954 YBX3P16989 372 aaKnown RBP eCLIP4.67□□□□□ -1.668e-7■■■□□ 17.1
UBE3A-202ENST00000397954 CTHP32929 405 aa4.67□□□□□ -1.66
UBE3A-202ENST00000397954 IGHMBP2P38935 993 aaKnown RBP4.67□□□□□ -1.66
UBE3A-202ENST00000397954 CASP7P55210 303 aa4.67□□□□□ -1.66
UBE3A-202ENST00000397954 UBE4AQ14139 1066 aa4.67□□□□□ -1.66
UBE3A-202ENST00000397954 GCKRQ14397 625 aa4.67□□□□□ -1.66
UBE3A-202ENST00000397954 DSC3Q14574 896 aa4.67□□□□□ -1.66
UBE3A-202ENST00000397954 HSP90AB4PQ58FF6 505 aa4.67□□□□□ -1.66
UBE3A-202ENST00000397954 SUSD4Q5VX71 490 aa4.67□□□□□ -1.66
UBE3A-202ENST00000397954 ANKRD18AQ8IVF6 992 aa4.67□□□□□ -1.66
UBE3A-202ENST00000397954 NIM1KQ8IY84 436 aa4.67□□□□□ -1.66
UBE3A-202ENST00000397954 ZGPATQ8N5A5 531 aaKnown RBP4.67□□□□□ -1.66
UBE3A-202ENST00000397954 MRPL50Q8N5N7 158 aaKnown RBP4.67□□□□□ -1.66
UBE3A-202ENST00000397954 SLC43A3Q8NBI5 491 aa4.67□□□□□ -1.66
UBE3A-202ENST00000397954 HELQQ8TDG4 1101 aa4.67□□□□□ -1.66
UBE3A-202ENST00000397954 TBC1D22AQ8WUA7 517 aa4.67□□□□□ -1.66
UBE3A-202ENST00000397954 JDP2Q8WYK2 163 aa4.67□□□□□ -1.66
UBE3A-202ENST00000397954 GMLQ99445 158 aa4.67□□□□□ -1.66
UBE3A-202ENST00000397954 SRCIN1Q9C0H9 1055 aa4.67□□□□□ -1.66
UBE3A-202ENST00000397954 SAP130Q9H0E3 1048 aa4.67□□□□□ -1.66
UBE3A-202ENST00000397954 GINM1Q9NU53 330 aa4.67□□□□□ -1.66
UBE3A-202ENST00000397954 DOLKQ9UPQ8 538 aa4.67□□□□□ -1.66
UBE3A-202ENST00000397954 PCDHGA11Q9Y5H2 935 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms