RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 PAK6Q9NQU5 681 aaPredicted RBP18.76■□□□□ 0.59
SEC13-206ENST00000397102 ZHX2Q9Y6X8 837 aa18.76■□□□□ 0.59
SEC13-206ENST00000397102 PHF20L1A8MW92 1017 aa18.75■□□□□ 0.59
SEC13-206ENST00000397102 TNPO2O14787 897 aaKnown RBP18.75■□□□□ 0.59
SEC13-206ENST00000397102 PTPRAP18433 802 aa18.75■□□□□ 0.59
SEC13-206ENST00000397102 PRDX5P30044 214 aa18.75■□□□□ 0.59
SEC13-206ENST00000397102 LPIN2Q92539 896 aa18.75■□□□□ 0.59
SEC13-206ENST00000397102 CRISPLD2Q9H0B8 497 aa18.75■□□□□ 0.59
SEC13-206ENST00000397102 PICK1Q9NRD5 415 aa18.75■□□□□ 0.59
SEC13-206ENST00000397102 USP40Q9NVE5 1235 aa18.75■□□□□ 0.59
SEC13-206ENST00000397102 STAP2Q9UGK3 403 aa18.75■□□□□ 0.59
SEC13-206ENST00000397102 DOCK3Q8IZD9 2030 aa18.74■□□□□ 0.59
SEC13-206ENST00000397102 GADL1Q6ZQY3 521 aa18.74■□□□□ 0.59
SEC13-206ENST00000397102 AFG3L2Q9Y4W6 797 aa18.74■□□□□ 0.59
SEC13-206ENST00000397102 MYH2Q9UKX2 1941 aa18.74■□□□□ 0.59
SEC13-206ENST00000397102 EYA2O00167 538 aa18.73■□□□□ 0.59
SEC13-206ENST00000397102 LDHBP07195 334 aaKnown RBP18.73■□□□□ 0.59
SEC13-206ENST00000397102 ZFPM1Q8IX07 1006 aa18.73■□□□□ 0.59
SEC13-206ENST00000397102 SMCR8Q8TEV9 937 aaPredicted RBP18.73■□□□□ 0.59
SEC13-206ENST00000397102 SALL1Q9NSC2 1324 aa18.73■□□□□ 0.59
SEC13-206ENST00000397102 ENTPD3O75355 529 aa18.72■□□□□ 0.59
SEC13-206ENST00000397102 GPR153Q6NV75 609 aa18.72■□□□□ 0.59
SEC13-206ENST00000397102 COA7Q96BR5 231 aa18.72■□□□□ 0.59
SEC13-206ENST00000397102 PAWRQ96IZ0 340 aaKnown RBP18.72■□□□□ 0.59
SEC13-206ENST00000397102 IDI2Q9BXS1 227 aa18.72■□□□□ 0.59
SEC13-206ENST00000397102 RFX7Q2KHR2 1363 aa18.71■□□□□ 0.59
SEC13-206ENST00000397102 BMP8BP34820 402 aa18.71■□□□□ 0.59
SEC13-206ENST00000397102 RFX5P48382 616 aaPredicted RBP18.71■□□□□ 0.59
SEC13-206ENST00000397102 RGS3P49796 1198 aa18.71■□□□□ 0.59
SEC13-206ENST00000397102 MNX1P50219 401 aaPredicted RBP18.71■□□□□ 0.59
SEC13-206ENST00000397102 MAP3K10Q02779 954 aa18.71■□□□□ 0.59
SEC13-206ENST00000397102 NECAB2Q7Z6G3 386 aa18.71■□□□□ 0.59
SEC13-206ENST00000397102 GDF15Q99988 308 aa18.71■□□□□ 0.59
SEC13-206ENST00000397102 MRS2Q9HD23 443 aa18.71■□□□□ 0.59
SEC13-206ENST00000397102 LRRFIP2Q9Y608 721 aaKnown RBP18.71■□□□□ 0.59
SEC13-206ENST00000397102 ANKLE1Q8NAG6 615 aa18.7■□□□□ 0.58
SEC13-206ENST00000397102 DIS3LQ8TF46 1054 aaKnown RBP18.7■□□□□ 0.58
SEC13-206ENST00000397102 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.7■□□□□ 0.58
SEC13-206ENST00000397102 GNL3LQ9NVN8 582 aaKnown RBP18.7■□□□□ 0.58
SEC13-206ENST00000397102 TAOK2Q9UL54 1235 aa18.7■□□□□ 0.58
SEC13-206ENST00000397102 AGTPBP1Q9UPW5 1226 aa18.7■□□□□ 0.58
SEC13-206ENST00000397102 CTNND1O60716 968 aaKnown RBP18.69■□□□□ 0.58
SEC13-206ENST00000397102 FAM110CQ1W6H9 321 aa18.69■□□□□ 0.58
SEC13-206ENST00000397102 SH3BP5LQ7L8J4 393 aa18.69■□□□□ 0.58
SEC13-206ENST00000397102 ZSCAN29Q8IWY8 852 aaPredicted RBP18.69■□□□□ 0.58
SEC13-206ENST00000397102 ANKRD13CQ8N6S4 541 aa18.69■□□□□ 0.58
SEC13-206ENST00000397102 USP44Q9H0E7 712 aa18.69■□□□□ 0.58
SEC13-206ENST00000397102 DENND2AQ9ULE3 1009 aa18.69■□□□□ 0.58
SEC13-206ENST00000397102 GAKO14976 1311 aa18.69■□□□□ 0.58
SEC13-206ENST00000397102 PTPRCP08575 1304 aa18.69■□□□□ 0.58
SEC13-206ENST00000397102 LAMA3Q16787 3333 aa18.69■□□□□ 0.58
SEC13-206ENST00000397102 LOC285556D6RIA3 1793 aa18.68■□□□□ 0.58
SEC13-206ENST00000397102 TRIM75PA6NK02 468 aa18.68■□□□□ 0.58
SEC13-206ENST00000397102 SEMA3EO15041 775 aa18.68■□□□□ 0.58
SEC13-206ENST00000397102 ATG9AQ7Z3C6 839 aa18.68■□□□□ 0.58
SEC13-206ENST00000397102 PNMA3Q9UL41 463 aa18.68■□□□□ 0.58
SEC13-206ENST00000397102 DDX60LQ5H9U9 1706 aaKnown RBP18.68■□□□□ 0.58
SEC13-206ENST00000397102 COL6A3P12111 3177 aa18.67■□□□□ 0.58
SEC13-206ENST00000397102 DDTLA6NHG4 134 aaPredicted RBP18.67■□□□□ 0.58
SEC13-206ENST00000397102 ZBTB22O15209 634 aa18.67■□□□□ 0.58
SEC13-206ENST00000397102 ATP2B3Q16720 1220 aa18.67■□□□□ 0.58
SEC13-206ENST00000397102 C7orf61Q8IZ16 206 aa18.67■□□□□ 0.58
SEC13-206ENST00000397102 ZGPATQ8N5A5 531 aaKnown RBP18.67■□□□□ 0.58
SEC13-206ENST00000397102 MRPL50Q8N5N7 158 aaKnown RBP18.67■□□□□ 0.58
SEC13-206ENST00000397102 FBXO3Q9UK99 471 aa18.67■□□□□ 0.58
SEC13-206ENST00000397102 HMGCRP04035 888 aa18.66■□□□□ 0.58
SEC13-206ENST00000397102 TREML2Q5T2D2 321 aa18.66■□□□□ 0.58
SEC13-206ENST00000397102 DEFB123Q8N688 67 aa18.66■□□□□ 0.58
SEC13-206ENST00000397102 PROCA1Q8NCQ7 364 aaPredicted RBP18.66■□□□□ 0.58
SEC13-206ENST00000397102 ZMYND8Q9ULU4 1186 aaPredicted RBP18.66■□□□□ 0.58
SEC13-206ENST00000397102 ATAD5Q96QE3 1844 aa18.65■□□□□ 0.58
SEC13-206ENST00000397102 CIAO1O76071 339 aa18.65■□□□□ 0.58
SEC13-206ENST00000397102 SLURP2P0DP57 97 aa18.65■□□□□ 0.58
SEC13-206ENST00000397102 PHKA1P46020 1223 aa18.65■□□□□ 0.58
SEC13-206ENST00000397102 LRIT3Q3SXY7 679 aa18.65■□□□□ 0.58
SEC13-206ENST00000397102 NBPF3Q9H094 633 aa18.65■□□□□ 0.58
SEC13-206ENST00000397102 DDX4Q9NQI0 724 aaKnown RBP18.65■□□□□ 0.58
SEC13-206ENST00000397102 CEP126Q9P2H0 1117 aa18.65■□□□□ 0.58
SEC13-206ENST00000397102 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.65■□□□□ 0.58
SEC13-206ENST00000397102 RPTORQ8N122 1335 aa18.65■□□□□ 0.58
SEC13-206ENST00000397102 GCLCP48506 637 aaPredicted RBP18.64■□□□□ 0.57
SEC13-206ENST00000397102 CCDC84Q86UT8 332 aaPredicted RBP18.64■□□□□ 0.57
SEC13-206ENST00000397102 DZIP1Q86YF9 867 aaKnown RBP18.64■□□□□ 0.57
SEC13-206ENST00000397102 SLF2Q8IX21 1173 aa18.64■□□□□ 0.57
SEC13-206ENST00000397102 FAM163AQ96GL9 167 aaPredicted RBP18.64■□□□□ 0.57
SEC13-206ENST00000397102 HMX1Q9NP08 348 aaPredicted RBP18.64■□□□□ 0.57
SEC13-206ENST00000397102 STXBP5LQ9Y2K9 1186 aa18.64■□□□□ 0.57
SEC13-206ENST00000397102 PLXNB2O15031 1838 aa18.64■□□□□ 0.57
SEC13-206ENST00000397102 TBC1D12O60347 775 aa18.63■□□□□ 0.57
SEC13-206ENST00000397102 PICALMQ13492 652 aa18.63■□□□□ 0.57
SEC13-206ENST00000397102 SIL1Q9H173 461 aa18.63■□□□□ 0.57
SEC13-206ENST00000397102 CUL9Q8IWT3 2517 aa18.62■□□□□ 0.57
SEC13-206ENST00000397102 BTDP43251 543 aa18.62■□□□□ 0.57
SEC13-206ENST00000397102 PABPC4Q13310 644 aaKnown RBP eCLIP18.62■□□□□ 0.57
SEC13-206ENST00000397102 Q7L0L9 218 aa18.62■□□□□ 0.57
SEC13-206ENST00000397102 TDHQ8IZJ6 230 aa18.62■□□□□ 0.57
SEC13-206ENST00000397102 TBC1D2Q9BYX2 928 aa18.62■□□□□ 0.57
SEC13-206ENST00000397102 OSBPL5Q9H0X9 879 aaPredicted RBP18.62■□□□□ 0.57
SEC13-206ENST00000397102 C11orf49Q9H6J7 331 aa18.62■□□□□ 0.57
SEC13-206ENST00000397102 GJD2Q9UKL4 321 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms