RNA–Protein interactions for RNA: ENST00000397033.6

ITGA4-203, Transcript of integrin subunit alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA4, Length 4,189 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-203ENST00000397033 FAM193AP78312 1265 aa13.93□□□□□ -0.18
ITGA4-203ENST00000397033 CCDC96Q2M329 555 aa13.93□□□□□ -0.18
ITGA4-203ENST00000397033 ATG9AQ7Z3C6 839 aa13.93□□□□□ -0.18
ITGA4-203ENST00000397033 EEF2KMTQ96G04 330 aa13.93□□□□□ -0.18
ITGA4-203ENST00000397033 CRNKL1Q9BZJ0 848 aaKnown RBP13.93□□□□□ -0.18
ITGA4-203ENST00000397033 KIF13AQ9H1H9 1805 aa13.93□□□□□ -0.18
ITGA4-203ENST00000397033 CCDC194A0A1B0GVG4 234 aa13.92□□□□□ -0.18
ITGA4-203ENST00000397033 PHACTR2O75167 634 aa13.92□□□□□ -0.18
ITGA4-203ENST00000397033 FBXO38Q6PIJ6 1188 aa13.92□□□□□ -0.18
ITGA4-203ENST00000397033 KRBA2Q6ZNG9 492 aa13.92□□□□□ -0.18
ITGA4-203ENST00000397033 CERS3Q8IU89 383 aa13.92□□□□□ -0.18
ITGA4-203ENST00000397033 IFNL3Q8IZI9 196 aa13.92□□□□□ -0.18
ITGA4-203ENST00000397033 KCNG4Q8TDN1 519 aa13.92□□□□□ -0.18
ITGA4-203ENST00000397033 CARD6Q9BX69 1037 aa13.92□□□□□ -0.18
ITGA4-203ENST00000397033 USP27XA6NNY8 438 aa13.92□□□□□ -0.18
ITGA4-203ENST00000397033 BTBD18B2RXH4 712 aa13.92□□□□□ -0.18
ITGA4-203ENST00000397033 AP5Z1O43299 807 aa13.92□□□□□ -0.18
ITGA4-203ENST00000397033 COBLO75128 1261 aa13.92□□□□□ -0.18
ITGA4-203ENST00000397033 ZNF827Q17R98 1081 aa13.92□□□□□ -0.18
ITGA4-203ENST00000397033 NSUN7Q8NE18 718 aaKnown RBP13.92□□□□□ -0.18
ITGA4-203ENST00000397033 RNF216Q9NWF9 866 aaPredicted RBP13.92□□□□□ -0.18
ITGA4-203ENST00000397033 SSH2Q76I76 1423 aa13.92□□□□□ -0.18
ITGA4-203ENST00000397033 TSPY3P0CV98 308 aa13.92□□□□□ -0.18
ITGA4-203ENST00000397033 TSPY8P0CW00 308 aa13.92□□□□□ -0.18
ITGA4-203ENST00000397033 UBASH3AP57075 661 aa13.92□□□□□ -0.18
ITGA4-203ENST00000397033 ERFEQ4G0M1 354 aa13.92□□□□□ -0.18
ITGA4-203ENST00000397033 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.92□□□□□ -0.18
ITGA4-203ENST00000397033 CRACR2BQ8N4Y2 399 aaPredicted RBP13.92□□□□□ -0.18
ITGA4-203ENST00000397033 RASGRF1Q13972 1273 aa13.91□□□□□ -0.18
ITGA4-203ENST00000397033 PPFIBP1Q86W92 1011 aa13.91□□□□□ -0.18
ITGA4-203ENST00000397033 SMARCC1Q92922 1105 aaPredicted RBP13.91□□□□□ -0.18
ITGA4-203ENST00000397033 PDE4BQ07343 736 aa13.91□□□□□ -0.18
ITGA4-203ENST00000397033 TERF2Q15554 542 aa13.91□□□□□ -0.18
ITGA4-203ENST00000397033 CCDC144BQ3MJ40 725 aa13.91□□□□□ -0.18
ITGA4-203ENST00000397033 ANO1Q5XXA6 986 aa13.91□□□□□ -0.18
ITGA4-203ENST00000397033 DDX41Q9UJV9 622 aaKnown RBP13.91□□□□□ -0.18
ITGA4-203ENST00000397033 SHPRHQ149N8 1683 aa13.91□□□□□ -0.18
ITGA4-203ENST00000397033 IPO7O95373 1038 aaKnown RBP13.91□□□□□ -0.18
ITGA4-203ENST00000397033 HIBADHP31937 336 aaKnown RBP13.91□□□□□ -0.18
ITGA4-203ENST00000397033 ARFGAP3Q9NP61 516 aa13.91□□□□□ -0.18
ITGA4-203ENST00000397033 VWA3AA6NCI4 1184 aa13.9□□□□□ -0.18
ITGA4-203ENST00000397033 KRT18P05783 430 aaKnown RBP13.9□□□□□ -0.18
ITGA4-203ENST00000397033 IDEP14735 1019 aa13.9□□□□□ -0.18
ITGA4-203ENST00000397033 MAPKAPK5Q8IW41 473 aa13.9□□□□□ -0.18
ITGA4-203ENST00000397033 CCDC47Q96A33 483 aaKnown RBP13.9□□□□□ -0.18
ITGA4-203ENST00000397033 ZSCAN12O43309 604 aa13.9□□□□□ -0.18
ITGA4-203ENST00000397033 RPS8P62241 208 aaKnown RBP13.9□□□□□ -0.18
ITGA4-203ENST00000397033 KMT5BQ4FZB7 885 aa13.9□□□□□ -0.18
ITGA4-203ENST00000397033 AXDND1Q5T1B0 1012 aaPredicted RBP13.9□□□□□ -0.18
ITGA4-203ENST00000397033 LCORLQ8N3X6 602 aa13.9□□□□□ -0.18
ITGA4-203ENST00000397033 CCDC12Q8WUD4 166 aaPredicted RBP13.9□□□□□ -0.18
ITGA4-203ENST00000397033 EVCP57679 992 aa13.9□□□□□ -0.18
ITGA4-203ENST00000397033 FAM160A1Q05DH4 1040 aa13.9□□□□□ -0.18
ITGA4-203ENST00000397033 FILIP1LQ4L180 1135 aa13.9□□□□□ -0.18
ITGA4-203ENST00000397033 C11orf57Q6ZUT1 292 aaPredicted RBP13.9□□□□□ -0.18
ITGA4-203ENST00000397033 TRMT44Q8IYL2 757 aaKnown RBP13.9□□□□□ -0.18
ITGA4-203ENST00000397033 TANGO6Q9C0B7 1094 aa13.9□□□□□ -0.18
ITGA4-203ENST00000397033 POLR2DO15514 142 aaKnown RBP13.9□□□□□ -0.19
ITGA4-203ENST00000397033 CBFA2T2O43439 604 aa13.9□□□□□ -0.19
ITGA4-203ENST00000397033 PFKFB2O60825 505 aa13.9□□□□□ -0.19
ITGA4-203ENST00000397033 KARSQ15046 597 aaKnown RBP13.9□□□□□ -0.19
ITGA4-203ENST00000397033 KIF4BQ2VIQ3 1234 aa13.9□□□□□ -0.19
ITGA4-203ENST00000397033 TRAPPC3LQ5T215 181 aa13.9□□□□□ -0.19
ITGA4-203ENST00000397033 CCDC150Q8NCX0 1101 aa13.9□□□□□ -0.19
ITGA4-203ENST00000397033 SMARCE1Q969G3 411 aa13.9□□□□□ -0.19
ITGA4-203ENST00000397033 USP21Q9UK80 565 aa13.9□□□□□ -0.19
ITGA4-203ENST00000397033 ZNF202O95125 648 aa13.89□□□□□ -0.19
ITGA4-203ENST00000397033 MSL1Q68DK7 614 aa13.89□□□□□ -0.19
ITGA4-203ENST00000397033 CNNM2Q9H8M5 875 aa13.89□□□□□ -0.19
ITGA4-203ENST00000397033 PCDHA7Q9UN72 937 aa13.89□□□□□ -0.19
ITGA4-203ENST00000397033 UFL1O94874 794 aa13.89□□□□□ -0.19
ITGA4-203ENST00000397033 DNA2P51530 1060 aa13.89□□□□□ -0.19
ITGA4-203ENST00000397033 NDUFA8P51970 172 aa13.89□□□□□ -0.19
ITGA4-203ENST00000397033 MYSM1Q5VVJ2 828 aa13.89□□□□□ -0.19
ITGA4-203ENST00000397033 AKNAD1Q5T1N1 836 aa13.89□□□□□ -0.19
ITGA4-203ENST00000397033 JAKMIP3Q5VZ66 844 aa13.89□□□□□ -0.19
ITGA4-203ENST00000397033 CNBD1Q8NA66 436 aa13.89□□□□□ -0.19
ITGA4-203ENST00000397033 LDHBP07195 334 aaKnown RBP13.88□□□□□ -0.19
ITGA4-203ENST00000397033 XPO4Q9C0E2 1151 aaKnown RBP13.88□□□□□ -0.19
ITGA4-203ENST00000397033 TMEM87AQ8NBN3 555 aa13.88□□□□□ -0.19
ITGA4-203ENST00000397033 ARHGAP23Q9P227 1491 aa13.88□□□□□ -0.19
ITGA4-203ENST00000397033 GOLGA8HP0CJ92 632 aa13.88□□□□□ -0.19
ITGA4-203ENST00000397033 PNOCQ13519 176 aa13.88□□□□□ -0.19
ITGA4-203ENST00000397033 PARP10Q53GL7 1025 aa13.88□□□□□ -0.19
ITGA4-203ENST00000397033 TXLNBQ8N3L3 684 aa13.88□□□□□ -0.19
ITGA4-203ENST00000397033 ZSWIM5Q9P217 1185 aa13.88□□□□□ -0.19
ITGA4-203ENST00000397033 SEC63Q9UGP8 760 aaKnown RBP13.88□□□□□ -0.19
ITGA4-203ENST00000397033 PUF60Q9UHX1 559 aaKnown RBP13.88□□□□□ -0.19
ITGA4-203ENST00000397033 FAM170AA1A519 330 aa13.87□□□□□ -0.19
ITGA4-203ENST00000397033 TRIM75PA6NK02 468 aa13.87□□□□□ -0.19
ITGA4-203ENST00000397033 SEC31AO94979 1220 aaKnown RBP13.87□□□□□ -0.19
ITGA4-203ENST00000397033 BAG3O95817 575 aa13.87□□□□□ -0.19
ITGA4-203ENST00000397033 UBA7P41226 1012 aa13.87□□□□□ -0.19
ITGA4-203ENST00000397033 NR5A1Q13285 461 aa13.87□□□□□ -0.19
ITGA4-203ENST00000397033 PIK3AP1Q6ZUJ8 805 aa13.87□□□□□ -0.19
ITGA4-203ENST00000397033 TGFBRAP1Q8WUH2 860 aa13.87□□□□□ -0.19
ITGA4-203ENST00000397033 TSPYL1Q9H0U9 437 aa13.87□□□□□ -0.19
ITGA4-203ENST00000397033 SLIT1O75093 1534 aa13.87□□□□□ -0.19
ITGA4-203ENST00000397033 CYP19A1P11511 503 aaPredicted RBP13.87□□□□□ -0.19
ITGA4-203ENST00000397033 CAPN2P17655 700 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms