RNA–Protein interactions for RNA: ENST00000396682.6

RPA3-202, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RPA3, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-202ENST00000396682 MTFR1Q15390 333 aa16.48■□□□□ 0.23
RPA3-202ENST00000396682 SCYL3Q8IZE3 742 aa16.48■□□□□ 0.23
RPA3-202ENST00000396682 ZGPATQ8N5A5 531 aaKnown RBP16.48■□□□□ 0.23
RPA3-202ENST00000396682 ZNF384Q8TF68 577 aa16.48■□□□□ 0.23
RPA3-202ENST00000396682 HDAC5Q9UQL6 1122 aa16.48■□□□□ 0.23
RPA3-202ENST00000396682 PTPRFP10586 1907 aa16.48■□□□□ 0.23
RPA3-202ENST00000396682 PHIPQ8WWQ0 1821 aa16.47■□□□□ 0.23
RPA3-202ENST00000396682 A0A0G2JLL6 359 aaPredicted RBP16.47■□□□□ 0.23
RPA3-202ENST00000396682 BCRP11274 1271 aa16.47■□□□□ 0.23
RPA3-202ENST00000396682 MTX1Q13505 466 aa16.47■□□□□ 0.23
RPA3-202ENST00000396682 PRRT2Q7Z6L0 340 aaPredicted RBP16.47■□□□□ 0.23
RPA3-202ENST00000396682 DZIP1Q86YF9 867 aaKnown RBP16.47■□□□□ 0.23
RPA3-202ENST00000396682 SHISA4Q96DD7 197 aa16.47■□□□□ 0.23
RPA3-202ENST00000396682 FAM163AQ96GL9 167 aaPredicted RBP16.47■□□□□ 0.23
RPA3-202ENST00000396682 XAGE2Q96GT9 111 aa16.47■□□□□ 0.23
RPA3-202ENST00000396682 PARK7Q99497 189 aaKnown RBP16.47■□□□□ 0.23
RPA3-202ENST00000396682 ABCF2Q9UG63 623 aa16.47■□□□□ 0.23
RPA3-202ENST00000396682 ZHX2Q9Y6X8 837 aa16.47■□□□□ 0.23
RPA3-202ENST00000396682 MGAMO43451 1857 aa16.46■□□□□ 0.23
RPA3-202ENST00000396682 DOCK1Q14185 1865 aa16.46■□□□□ 0.23
RPA3-202ENST00000396682 SRGAP3O43295 1099 aa16.46■□□□□ 0.23
RPA3-202ENST00000396682 PTPRAP18433 802 aa16.46■□□□□ 0.23
RPA3-202ENST00000396682 BTDP43251 543 aa16.46■□□□□ 0.23
RPA3-202ENST00000396682 ARHGAP45Q92619 1136 aa16.46■□□□□ 0.23
RPA3-202ENST00000396682 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.46■□□□□ 0.23
RPA3-202ENST00000396682 AFG3L2Q9Y4W6 797 aa16.46■□□□□ 0.23
RPA3-202ENST00000396682 MROH7-TTC4A0A0A0MT08 1334 aa16.45■□□□□ 0.22
RPA3-202ENST00000396682 MYPNQ86TC9 1320 aa16.45■□□□□ 0.22
RPA3-202ENST00000396682 FMNL1O95466 1100 aaPredicted RBP16.45■□□□□ 0.22
RPA3-202ENST00000396682 RHBDL3P58872 404 aa16.45■□□□□ 0.22
RPA3-202ENST00000396682 MECOMQ03112 1051 aa16.45■□□□□ 0.22
RPA3-202ENST00000396682 PICALMQ13492 652 aa16.45■□□□□ 0.22
RPA3-202ENST00000396682 ZSCAN29Q8IWY8 852 aaPredicted RBP16.45■□□□□ 0.22
RPA3-202ENST00000396682 TNNQ9UQP3 1299 aa16.45■□□□□ 0.22
RPA3-202ENST00000396682 RANBP2P49792 3224 aaKnown RBP16.45■□□□□ 0.22
RPA3-202ENST00000396682 GPR75-ASB3A0A0A6YYF3 556 aa16.44■□□□□ 0.22
RPA3-202ENST00000396682 GNAI3P08754 354 aa16.44■□□□□ 0.22
RPA3-202ENST00000396682 GRK4P32298 578 aa16.44■□□□□ 0.22
RPA3-202ENST00000396682 PRKCZQ05513 592 aa16.44■□□□□ 0.22
RPA3-202ENST00000396682 MVPQ14764 893 aaKnown RBP16.44■□□□□ 0.22
RPA3-202ENST00000396682 PI16Q6UXB8 463 aa16.44■□□□□ 0.22
RPA3-202ENST00000396682 CCDC84Q86UT8 332 aaPredicted RBP16.44■□□□□ 0.22
RPA3-202ENST00000396682 RAET1EQ8TD07 263 aa16.44■□□□□ 0.22
RPA3-202ENST00000396682 PICK1Q9NRD5 415 aa16.44■□□□□ 0.22
RPA3-202ENST00000396682 HMG20BQ9P0W2 317 aa16.44■□□□□ 0.22
RPA3-202ENST00000396682 AKAP2Q9Y2D5 859 aa16.44■□□□□ 0.22
RPA3-202ENST00000396682 TRIOBPQ9H2D6 2365 aa16.43■□□□□ 0.22
RPA3-202ENST00000396682 HOXD10P28358 340 aa16.43■□□□□ 0.22
RPA3-202ENST00000396682 SPTY2D1Q68D10 685 aaPredicted RBP16.43■□□□□ 0.22
RPA3-202ENST00000396682 ERICH6Q7L0X2 663 aa16.43■□□□□ 0.22
RPA3-202ENST00000396682 FASTKD5Q7L8L6 764 aaKnown RBP16.43■□□□□ 0.22
RPA3-202ENST00000396682 SLF2Q8IX21 1173 aa16.43■□□□□ 0.22
RPA3-202ENST00000396682 COLQQ9Y215 455 aaPredicted RBP16.43■□□□□ 0.22
RPA3-202ENST00000396682 H0YGN5 161 aa16.42■□□□□ 0.22
RPA3-202ENST00000396682 CTNND1O60716 968 aaKnown RBP16.42■□□□□ 0.22
RPA3-202ENST00000396682 TRIM27P14373 513 aa16.42■□□□□ 0.22
RPA3-202ENST00000396682 FXR1P51114 621 aaKnown RBP eCLIP16.42■□□□□ 0.22
RPA3-202ENST00000396682 FCGRTP55899 365 aa16.42■□□□□ 0.22
RPA3-202ENST00000396682 GADL1Q6ZQY3 521 aa16.42■□□□□ 0.22
RPA3-202ENST00000396682 TBC1D9Q6ZT07 1266 aa16.42■□□□□ 0.22
RPA3-202ENST00000396682 NSUN4Q96CB9 384 aaKnown RBP16.42■□□□□ 0.22
RPA3-202ENST00000396682 NEUROD6Q96NK8 337 aa16.42■□□□□ 0.22
RPA3-202ENST00000396682 GABRQQ9UN88 632 aa16.42■□□□□ 0.22
RPA3-202ENST00000396682 SLC45A1Q9Y2W3 748 aa16.42■□□□□ 0.22
RPA3-202ENST00000396682 SZT2Q5T011 3432 aa16.42■□□□□ 0.22
RPA3-202ENST00000396682 PNMA6EA0A0J9YXQ4 647 aa16.41■□□□□ 0.22
RPA3-202ENST00000396682 TRIM75PA6NK02 468 aa16.41■□□□□ 0.22
RPA3-202ENST00000396682 FAM196BA6NMK8 535 aa16.41■□□□□ 0.22
RPA3-202ENST00000396682 TBC1D12O60347 775 aa16.41■□□□□ 0.22
RPA3-202ENST00000396682 NPM3O75607 178 aaKnown RBP16.41■□□□□ 0.22
RPA3-202ENST00000396682 CCL5P13501 91 aa16.41■□□□□ 0.22
RPA3-202ENST00000396682 UBE2Q1Q7Z7E8 422 aa16.41■□□□□ 0.22
RPA3-202ENST00000396682 SPATA5Q8NB90 893 aa16.41■□□□□ 0.22
RPA3-202ENST00000396682 BCAR3O75815 825 aa16.4■□□□□ 0.22
RPA3-202ENST00000396682 GJB1P08034 283 aa16.4■□□□□ 0.22
RPA3-202ENST00000396682 ARID4AP29374 1257 aaPredicted RBP16.4■□□□□ 0.22
RPA3-202ENST00000396682 GJA8P48165 433 aa16.4■□□□□ 0.22
RPA3-202ENST00000396682 COL2A1P02458 1487 aaPredicted RBP16.4■□□□□ 0.22
RPA3-202ENST00000396682 CCER2I3L3R5 266 aa16.39■□□□□ 0.21
RPA3-202ENST00000396682 GNAI2P04899 355 aa16.39■□□□□ 0.21
RPA3-202ENST00000396682 MCAMP43121 646 aa16.39■□□□□ 0.21
RPA3-202ENST00000396682 RRP1BQ14684 758 aaKnown RBP16.39■□□□□ 0.21
RPA3-202ENST00000396682 TREML2Q5T2D2 321 aa16.39■□□□□ 0.21
RPA3-202ENST00000396682 ATF7IPQ6VMQ6 1270 aa16.39■□□□□ 0.21
RPA3-202ENST00000396682 SLAIN1Q8ND83 568 aa16.39■□□□□ 0.21
RPA3-202ENST00000396682 RNF208Q9H0X6 261 aa16.39■□□□□ 0.21
RPA3-202ENST00000396682 AGTPBP1Q9UPW5 1226 aa16.39■□□□□ 0.21
RPA3-202ENST00000396682 ATAD5Q96QE3 1844 aa16.39■□□□□ 0.21
RPA3-202ENST00000396682 LOC285556D6RIA3 1793 aa16.38■□□□□ 0.21
RPA3-202ENST00000396682 DOCK3Q8IZD9 2030 aa16.38■□□□□ 0.21
RPA3-202ENST00000396682 SIPA1L1O43166 1804 aa16.38■□□□□ 0.21
RPA3-202ENST00000396682 FLT3LGP49771 235 aa16.38■□□□□ 0.21
RPA3-202ENST00000396682 NKX2-3Q8TAU0 364 aa16.38■□□□□ 0.21
RPA3-202ENST00000396682 SMCR8Q8TEV9 937 aaPredicted RBP16.38■□□□□ 0.21
RPA3-202ENST00000396682 OSBPL5Q9H0X9 879 aaPredicted RBP16.38■□□□□ 0.21
RPA3-202ENST00000396682 UNC93B1Q9H1C4 597 aa16.38■□□□□ 0.21
RPA3-202ENST00000396682 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.38■□□□□ 0.21
RPA3-202ENST00000396682 BIN2Q9UBW5 565 aaPredicted RBP16.38■□□□□ 0.21
RPA3-202ENST00000396682 IPO8O15397 1037 aaKnown RBP16.37■□□□□ 0.21
RPA3-202ENST00000396682 MAP4K4O95819 1239 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms