RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 NID2Q14112 1375 aa19.25■□□□□ 0.67
TRIM39-205ENST00000396551 IARSP41252 1262 aaKnown RBP19.25■□□□□ 0.67
TRIM39-205ENST00000396551 UBE4AQ14139 1066 aa19.25■□□□□ 0.67
TRIM39-205ENST00000396551 NOLC1Q14978 699 aaKnown RBP eCLIP19.25■□□□□ 0.67
TRIM39-205ENST00000396551 AXDND1Q5T1B0 1012 aaPredicted RBP19.25■□□□□ 0.67
TRIM39-205ENST00000396551 CPLX2Q6PUV4 134 aaKnown RBP19.25■□□□□ 0.67
TRIM39-205ENST00000396551 SYNE3Q6ZMZ3 975 aa19.25■□□□□ 0.67
TRIM39-205ENST00000396551 ABCF2Q9UG63 623 aa19.25■□□□□ 0.67
TRIM39-205ENST00000396551 SLC12A7Q9Y666 1083 aa19.25■□□□□ 0.67
TRIM39-205ENST00000396551 BTAF1O14981 1849 aa19.24■□□□□ 0.67
TRIM39-205ENST00000396551 COL24A1Q17RW2 1714 aa19.24■□□□□ 0.67
TRIM39-205ENST00000396551 CCDC69A6NI79 296 aa19.24■□□□□ 0.67
TRIM39-205ENST00000396551 SDR42E1Q8WUS8 393 aa19.24■□□□□ 0.67
TRIM39-205ENST00000396551 TAOK2Q9UL54 1235 aa19.24■□□□□ 0.67
TRIM39-205ENST00000396551 PYCARDQ9ULZ3 195 aa19.24■□□□□ 0.67
TRIM39-205ENST00000396551 SMIM22K7EJ46 135 aa19.23■□□□□ 0.67
TRIM39-205ENST00000396551 BAZ2AQ9UIF9 1905 aaKnown RBP19.23■□□□□ 0.67
TRIM39-205ENST00000396551 WDHD1O75717 1129 aaPredicted RBP19.23■□□□□ 0.67
TRIM39-205ENST00000396551 SLC10A5Q5PT55 438 aa19.23■□□□□ 0.67
TRIM39-205ENST00000396551 TRIM5Q9C035 493 aa19.23■□□□□ 0.67
TRIM39-205ENST00000396551 MROH7-TTC4A0A0A0MT08 1334 aa19.23■□□□□ 0.67
TRIM39-205ENST00000396551 STK36Q9NRP7 1315 aa19.23■□□□□ 0.67
TRIM39-205ENST00000396551 PTGS1P23219 599 aa19.23■□□□□ 0.67
TRIM39-205ENST00000396551 VPS72Q15906 364 aa19.23■□□□□ 0.67
TRIM39-205ENST00000396551 TOMM22Q9NS69 142 aa19.23■□□□□ 0.67
TRIM39-205ENST00000396551 RAI14Q9P0K7 980 aa19.23■□□□□ 0.67
TRIM39-205ENST00000396551 SRP68Q9UHB9 627 aaKnown RBP19.23■□□□□ 0.67
TRIM39-205ENST00000396551 GOLGA6L6A8MZA4 724 aa19.22■□□□□ 0.67
TRIM39-205ENST00000396551 TPM3P06753 285 aa19.22■□□□□ 0.67
TRIM39-205ENST00000396551 PPARAQ07869 468 aa19.22■□□□□ 0.67
TRIM39-205ENST00000396551 SLC39A14Q15043 492 aa19.22■□□□□ 0.67
TRIM39-205ENST00000396551 ZNF384Q8TF68 577 aa19.22■□□□□ 0.67
TRIM39-205ENST00000396551 FAM84BQ96KN1 310 aaPredicted RBP19.22■□□□□ 0.67
TRIM39-205ENST00000396551 RIOK1Q9BRS2 568 aaKnown RBP19.22■□□□□ 0.67
TRIM39-205ENST00000396551 SLC26A6Q9BXS9 759 aa19.22■□□□□ 0.67
TRIM39-205ENST00000396551 SPTLC3Q9NUV7 552 aa19.22■□□□□ 0.67
TRIM39-205ENST00000396551 FMNL1O95466 1100 aaPredicted RBP19.22■□□□□ 0.67
TRIM39-205ENST00000396551 C8orf37Q96NL8 207 aa19.22■□□□□ 0.67
TRIM39-205ENST00000396551 MYH13Q9UKX3 1938 aa19.22■□□□□ 0.67
TRIM39-205ENST00000396551 MAGEB6P1A0A0J9YX57 407 aa19.21■□□□□ 0.67
TRIM39-205ENST00000396551 DHX40Q8IX18 779 aaKnown RBP19.21■□□□□ 0.67
TRIM39-205ENST00000396551 KIAA1524Q8TCG1 905 aa19.21■□□□□ 0.67
TRIM39-205ENST00000396551 GNL3LQ9NVN8 582 aaKnown RBP19.21■□□□□ 0.67
TRIM39-205ENST00000396551 NRBP1Q9UHY1 535 aa19.21■□□□□ 0.67
TRIM39-205ENST00000396551 IFNAR1P17181 557 aa19.21■□□□□ 0.67
TRIM39-205ENST00000396551 U2AF2P26368 475 aaKnown RBP eCLIP19.21■□□□□ 0.67
TRIM39-205ENST00000396551 KLRK1P26718 216 aa19.21■□□□□ 0.67
TRIM39-205ENST00000396551 MARCKSP29966 332 aaPredicted RBP19.21■□□□□ 0.67
TRIM39-205ENST00000396551 GUCY1A2P33402 732 aa19.21■□□□□ 0.67
TRIM39-205ENST00000396551 WTAPQ15007 396 aa19.21■□□□□ 0.67
TRIM39-205ENST00000396551 ANO10Q9NW15 660 aa19.21■□□□□ 0.67
TRIM39-205ENST00000396551 MYH2Q9UKX2 1941 aa19.21■□□□□ 0.67
TRIM39-205ENST00000396551 SSRP1Q08945 709 aaKnown RBP19.21■□□□□ 0.67
TRIM39-205ENST00000396551 PTPAQ15257 358 aa19.21■□□□□ 0.67
TRIM39-205ENST00000396551 DYNLL1P63167 89 aaKnown RBP19.2■□□□□ 0.66
TRIM39-205ENST00000396551 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.2■□□□□ 0.66
TRIM39-205ENST00000396551 MAP3K14Q99558 947 aa19.2■□□□□ 0.66
TRIM39-205ENST00000396551 SDF4Q9BRK5 362 aa19.2■□□□□ 0.66
TRIM39-205ENST00000396551 NARFQ9UHQ1 456 aa19.2■□□□□ 0.66
TRIM39-205ENST00000396551 RGL2O15211 777 aa19.2■□□□□ 0.66
TRIM39-205ENST00000396551 SARM1Q6SZW1 724 aa19.2■□□□□ 0.66
TRIM39-205ENST00000396551 CCDC186Q7Z3E2 898 aa19.2■□□□□ 0.66
TRIM39-205ENST00000396551 NGLY1Q96IV0 654 aa19.2■□□□□ 0.66
TRIM39-205ENST00000396551 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.2■□□□□ 0.66
TRIM39-205ENST00000396551 ANAPC4Q9UJX5 808 aa19.2■□□□□ 0.66
TRIM39-205ENST00000396551 TOM1O60784 492 aa19.19■□□□□ 0.66
TRIM39-205ENST00000396551 PFKFB1P16118 471 aa19.19■□□□□ 0.66
TRIM39-205ENST00000396551 CMA1P23946 247 aa19.19■□□□□ 0.66
TRIM39-205ENST00000396551 GTF2E1P29083 439 aaPredicted RBP19.19■□□□□ 0.66
TRIM39-205ENST00000396551 MINDY4BA8MYZ0 360 aa19.19■□□□□ 0.66
TRIM39-205ENST00000396551 RPS6KA4O75676 772 aa19.19■□□□□ 0.66
TRIM39-205ENST00000396551 ZNF202O95125 648 aa19.19■□□□□ 0.66
TRIM39-205ENST00000396551 CAVIN4Q5BKX8 364 aa19.19■□□□□ 0.66
TRIM39-205ENST00000396551 NBPF11Q86T75 865 aa19.19■□□□□ 0.66
TRIM39-205ENST00000396551 RNF41Q9H4P4 317 aaPredicted RBP19.19■□□□□ 0.66
TRIM39-205ENST00000396551 KIAA1468Q9P260 1216 aa19.19■□□□□ 0.66
TRIM39-205ENST00000396551 DUOX1Q9NRD9 1551 aa19.19■□□□□ 0.66
TRIM39-205ENST00000396551 GOLGA6L19H0YKK7 550 aa19.19■□□□□ 0.66
TRIM39-205ENST00000396551 RTN1Q16799 776 aa19.19■□□□□ 0.66
TRIM39-205ENST00000396551 RC3H1Q5TC82 1133 aaKnown RBP19.19■□□□□ 0.66
TRIM39-205ENST00000396551 FBXO33Q7Z6M2 555 aa19.19■□□□□ 0.66
TRIM39-205ENST00000396551 AMIGO3Q86WK7 504 aa19.19■□□□□ 0.66
TRIM39-205ENST00000396551 MTA3Q9BTC8 594 aa19.19■□□□□ 0.66
TRIM39-205ENST00000396551 BCL11BQ9C0K0 894 aaPredicted RBP19.19■□□□□ 0.66
TRIM39-205ENST00000396551 MYH6P13533 1939 aa19.18■□□□□ 0.66
TRIM39-205ENST00000396551 CCDC24Q8N4L8 307 aa19.18■□□□□ 0.66
TRIM39-205ENST00000396551 FBXW7Q969H0 707 aa19.18■□□□□ 0.66
TRIM39-205ENST00000396551 NHSQ6T4R5 1651 aa19.18■□□□□ 0.66
TRIM39-205ENST00000396551 GNL2Q13823 731 aaKnown RBP19.18■□□□□ 0.66
TRIM39-205ENST00000396551 TRIM29Q14134 588 aa19.18■□□□□ 0.66
TRIM39-205ENST00000396551 SART3Q15020 963 aaKnown RBP19.18■□□□□ 0.66
TRIM39-205ENST00000396551 PPP6R2O75170 966 aa19.17■□□□□ 0.66
TRIM39-205ENST00000396551 SEC23AQ15436 765 aa19.17■□□□□ 0.66
TRIM39-205ENST00000396551 DRC7Q8IY82 874 aa19.17■□□□□ 0.66
TRIM39-205ENST00000396551 CMTR1Q8N1G2 835 aaKnown RBP19.17■□□□□ 0.66
TRIM39-205ENST00000396551 CYP2D7A0A087X1C5 515 aa19.17■□□□□ 0.66
TRIM39-205ENST00000396551 CDC25BP30305 580 aa19.17■□□□□ 0.66
TRIM39-205ENST00000396551 SHC4Q6S5L8 630 aa19.17■□□□□ 0.66
TRIM39-205ENST00000396551 ZNF654Q8IZM8 581 aa19.17■□□□□ 0.66
TRIM39-205ENST00000396551 TAF1LQ8IZX4 1826 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms