RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 SERPINB2P05120 415 aa18.76■□□□□ 0.59
SNX6-202ENST00000396526 LDHCP07864 332 aa18.76■□□□□ 0.59
SNX6-202ENST00000396526 YEATS4O95619 227 aa18.76■□□□□ 0.59
SNX6-202ENST00000396526 POLR3DP05423 398 aaPredicted RBP18.76■□□□□ 0.59
SNX6-202ENST00000396526 RXRAP19793 462 aa18.76■□□□□ 0.59
SNX6-202ENST00000396526 MECOMQ03112 1051 aa18.76■□□□□ 0.59
SNX6-202ENST00000396526 CAMK4Q16566 473 aa18.76■□□□□ 0.59
SNX6-202ENST00000396526 CCAR1Q8IX12 1150 aaKnown RBP18.76■□□□□ 0.59
SNX6-202ENST00000396526 CCDC144CPQ8IYA2 1237 aa18.76■□□□□ 0.59
SNX6-202ENST00000396526 PGBD1Q96JS3 809 aa18.76■□□□□ 0.59
SNX6-202ENST00000396526 PDLIM2Q96JY6 352 aa18.76■□□□□ 0.59
SNX6-202ENST00000396526 LRRC4BQ9NT99 713 aa18.76■□□□□ 0.59
SNX6-202ENST00000396526 PRR5LQ6MZQ0 368 aa18.75■□□□□ 0.59
SNX6-202ENST00000396526 JMYQ8N9B5 988 aa18.75■□□□□ 0.59
SNX6-202ENST00000396526 CCDC39Q9UFE4 941 aa18.75■□□□□ 0.59
SNX6-202ENST00000396526 CAVIN2O95810 425 aa18.75■□□□□ 0.59
SNX6-202ENST00000396526 LDHBP07195 334 aaKnown RBP18.75■□□□□ 0.59
SNX6-202ENST00000396526 SLC26A6Q9BXS9 759 aa18.75■□□□□ 0.59
SNX6-202ENST00000396526 INCENPQ9NQS7 918 aa18.75■□□□□ 0.59
SNX6-202ENST00000396526 RANBP6O60518 1105 aaKnown RBP18.75■□□□□ 0.59
SNX6-202ENST00000396526 BAG3O95817 575 aa18.75■□□□□ 0.59
SNX6-202ENST00000396526 IFNAR1P17181 557 aa18.75■□□□□ 0.59
SNX6-202ENST00000396526 DYNLL1P63167 89 aaKnown RBP18.75■□□□□ 0.59
SNX6-202ENST00000396526 OTUD7BQ6GQQ9 843 aa18.75■□□□□ 0.59
SNX6-202ENST00000396526 STK36Q9NRP7 1315 aa18.74■□□□□ 0.59
SNX6-202ENST00000396526 WTIPA6NIX2 430 aaPredicted RBP18.74■□□□□ 0.59
SNX6-202ENST00000396526 BBOX1O75936 387 aa18.74■□□□□ 0.59
SNX6-202ENST00000396526 XBP1P17861 261 aa18.74■□□□□ 0.59
SNX6-202ENST00000396526 ATP2B4P23634 1241 aa18.74■□□□□ 0.59
SNX6-202ENST00000396526 MYSM1Q5VVJ2 828 aa18.74■□□□□ 0.59
SNX6-202ENST00000396526 ADGRA1Q86SQ6 560 aa18.74■□□□□ 0.59
SNX6-202ENST00000396526 NUP133Q8WUM0 1156 aa18.74■□□□□ 0.59
SNX6-202ENST00000396526 DOCK2Q92608 1830 aa18.74■□□□□ 0.59
SNX6-202ENST00000396526 MYO5AQ9Y4I1 1855 aaKnown RBP18.74■□□□□ 0.59
SNX6-202ENST00000396526 TRIM37O94972 964 aa18.74■□□□□ 0.59
SNX6-202ENST00000396526 NT5C2P49902 561 aa18.74■□□□□ 0.59
SNX6-202ENST00000396526 ZSCAN30Q86W11 494 aa18.74■□□□□ 0.59
SNX6-202ENST00000396526 AMIGO3Q86WK7 504 aa18.74■□□□□ 0.59
SNX6-202ENST00000396526 ZKSCAN3Q9BRR0 538 aa18.74■□□□□ 0.59
SNX6-202ENST00000396526 POLR3EQ9NVU0 708 aa18.74■□□□□ 0.59
SNX6-202ENST00000396526 GYS1P13807 737 aa18.73■□□□□ 0.59
SNX6-202ENST00000396526 PDE4BQ07343 736 aa18.73■□□□□ 0.59
SNX6-202ENST00000396526 ZRSR1Q15695 479 aaKnown RBP18.73■□□□□ 0.59
SNX6-202ENST00000396526 CATIPQ7Z7H3 387 aa18.73■□□□□ 0.59
SNX6-202ENST00000396526 AATFQ9NY61 560 aaKnown RBP eCLIP18.73■□□□□ 0.59
SNX6-202ENST00000396526 PLCB2Q00722 1185 aa18.73■□□□□ 0.59
SNX6-202ENST00000396526 KRT40Q6A162 431 aa18.73■□□□□ 0.59
SNX6-202ENST00000396526 CERS3Q8IU89 383 aa18.73■□□□□ 0.59
SNX6-202ENST00000396526 C4BP0C0L5 1744 aa18.73■□□□□ 0.59
SNX6-202ENST00000396526 USP17L12C9JPN9 530 aa18.73■□□□□ 0.59
SNX6-202ENST00000396526 USP17L21D6R901 530 aa18.73■□□□□ 0.59
SNX6-202ENST00000396526 CALM1P0DP23 149 aa18.73■□□□□ 0.59
SNX6-202ENST00000396526 CALM2P0DP24 149 aa18.73■□□□□ 0.59
SNX6-202ENST00000396526 CALM3P0DP25 149 aa18.73■□□□□ 0.59
SNX6-202ENST00000396526 KLRK1P26718 216 aa18.73■□□□□ 0.59
SNX6-202ENST00000396526 CDC27P30260 824 aa18.73■□□□□ 0.59
SNX6-202ENST00000396526 ADALQ6DHV7 355 aa18.73■□□□□ 0.59
SNX6-202ENST00000396526 FSIP1Q8NA03 581 aa18.73■□□□□ 0.59
SNX6-202ENST00000396526 PHKBQ93100 1093 aa18.73■□□□□ 0.59
SNX6-202ENST00000396526 ARPP21Q9UBL0 812 aaPredicted RBP18.73■□□□□ 0.59
SNX6-202ENST00000396526 TAOK2Q9UL54 1235 aa18.73■□□□□ 0.59
SNX6-202ENST00000396526 NR1I2O75469 434 aa18.72■□□□□ 0.59
SNX6-202ENST00000396526 KIF23Q02241 960 aaPredicted RBP18.72■□□□□ 0.59
SNX6-202ENST00000396526 TYRO3Q06418 890 aa18.72■□□□□ 0.59
SNX6-202ENST00000396526 ZNF654Q8IZM8 581 aa18.72■□□□□ 0.59
SNX6-202ENST00000396526 FAM200AQ8TCP9 573 aa18.72■□□□□ 0.59
SNX6-202ENST00000396526 MRPS27Q92552 414 aaKnown RBP18.72■□□□□ 0.59
SNX6-202ENST00000396526 MYL10Q9BUA6 226 aa18.72■□□□□ 0.59
SNX6-202ENST00000396526 SPTLC2O15270 562 aa18.72■□□□□ 0.59
SNX6-202ENST00000396526 FAM160A1Q05DH4 1040 aa18.72■□□□□ 0.59
SNX6-202ENST00000396526 IFIT1BQ5T764 474 aaKnown RBP18.72■□□□□ 0.59
SNX6-202ENST00000396526 TMC4Q7Z404 712 aa18.72■□□□□ 0.59
SNX6-202ENST00000396526 CKAP2LQ8IYA6 745 aa18.72■□□□□ 0.59
SNX6-202ENST00000396526 FANCBQ8NB91 859 aa18.72■□□□□ 0.59
SNX6-202ENST00000396526 GGA1Q9UJY5 639 aa18.72■□□□□ 0.59
SNX6-202ENST00000396526 FMNL1O95466 1100 aaPredicted RBP18.72■□□□□ 0.59
SNX6-202ENST00000396526 TMX4Q9H1E5 349 aaPredicted RBP18.72■□□□□ 0.59
SNX6-202ENST00000396526 DEXIO95424 95 aa18.71■□□□□ 0.59
SNX6-202ENST00000396526 PRDX5P30044 214 aa18.71■□□□□ 0.59
SNX6-202ENST00000396526 FUCA2Q9BTY2 467 aa18.71■□□□□ 0.59
SNX6-202ENST00000396526 TNKSO95271 1327 aa18.71■□□□□ 0.59
SNX6-202ENST00000396526 A0A1W2PQ27 194 aa18.71■□□□□ 0.59
SNX6-202ENST00000396526 A0A1W2PQ64 194 aa18.71■□□□□ 0.59
SNX6-202ENST00000396526 A0A1W2PQD8 194 aa18.71■□□□□ 0.59
SNX6-202ENST00000396526 CLCN1P35523 988 aa18.71■□□□□ 0.59
SNX6-202ENST00000396526 USP5P45974 858 aa18.71■□□□□ 0.59
SNX6-202ENST00000396526 ANO1Q5XXA6 986 aa18.71■□□□□ 0.59
SNX6-202ENST00000396526 LINC00301Q8NCQ3 95 aa18.71■□□□□ 0.59
SNX6-202ENST00000396526 ZSCAN10Q96SZ4 725 aaPredicted RBP18.71■□□□□ 0.59
SNX6-202ENST00000396526 SENP2Q9HC62 589 aa18.71■□□□□ 0.59
SNX6-202ENST00000396526 COL24A1Q17RW2 1714 aa18.71■□□□□ 0.58
SNX6-202ENST00000396526 C15orf52Q6ZUT6 534 aaKnown RBP18.7■□□□□ 0.58
SNX6-202ENST00000396526 SLF2Q8IX21 1173 aa18.7■□□□□ 0.58
SNX6-202ENST00000396526 SDF4Q9BRK5 362 aa18.7■□□□□ 0.58
SNX6-202ENST00000396526 LY75O60449 1722 aa18.7■□□□□ 0.58
SNX6-202ENST00000396526 UFL1O94874 794 aa18.7■□□□□ 0.58
SNX6-202ENST00000396526 NTRK3Q16288 839 aa18.7■□□□□ 0.58
SNX6-202ENST00000396526 TDRD7Q8NHU6 1098 aaKnown RBP18.7■□□□□ 0.58
SNX6-202ENST00000396526 CTR9Q6PD62 1173 aa18.7■□□□□ 0.58
SNX6-202ENST00000396526 RBM28Q9NW13 759 aaKnown RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms