RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 MTERF4Q7Z6M4 381 aaKnown RBP10.77□□□□□ -0.69
NDE1-201ENST00000396354 PLA2G4DQ86XP0 818 aa10.77□□□□□ -0.69
NDE1-201ENST00000396354 ANO10Q9NW15 660 aa10.77□□□□□ -0.69
NDE1-201ENST00000396354 COL5A3P25940 1745 aaPredicted RBP10.77□□□□□ -0.69
NDE1-201ENST00000396354 ATRNO75882 1429 aa10.76□□□□□ -0.69
NDE1-201ENST00000396354 ELP1O95163 1332 aa10.76□□□□□ -0.69
NDE1-201ENST00000396354 ZNF213O14771 459 aa10.76□□□□□ -0.69
NDE1-201ENST00000396354 PFKFB2O60825 505 aa10.76□□□□□ -0.69
NDE1-201ENST00000396354 TRDNQ13061 729 aa10.76□□□□□ -0.69
NDE1-201ENST00000396354 SNW1Q13573 536 aaKnown RBP10.76□□□□□ -0.69
NDE1-201ENST00000396354 TDRD7Q8NHU6 1098 aaKnown RBP10.76□□□□□ -0.69
NDE1-201ENST00000396354 AGXT2Q9BYV1 514 aa10.76□□□□□ -0.69
NDE1-201ENST00000396354 ZSCAN16Q9H4T2 348 aaPredicted RBP10.76□□□□□ -0.69
NDE1-201ENST00000396354 CARMIL3Q8ND23 1372 aa10.76□□□□□ -0.69
NDE1-201ENST00000396354 MYH15Q9Y2K3 1946 aa10.76□□□□□ -0.69
NDE1-201ENST00000396354 ANKRD18BA2A2Z9 1011 aa10.76□□□□□ -0.69
NDE1-201ENST00000396354 PDE8BO95263 885 aa10.76□□□□□ -0.69
NDE1-201ENST00000396354 ZSCAN20P17040 1043 aaPredicted RBP10.76□□□□□ -0.69
NDE1-201ENST00000396354 IQCB1Q15051 598 aa10.76□□□□□ -0.69
NDE1-201ENST00000396354 ERCC6LQ2NKX8 1250 aa10.76□□□□□ -0.69
NDE1-201ENST00000396354 CCDC102BQ68D86 513 aa10.76□□□□□ -0.69
NDE1-201ENST00000396354 KLHL10Q6JEL2 608 aa10.76□□□□□ -0.69
NDE1-201ENST00000396354 DHX40Q8IX18 779 aaKnown RBP10.76□□□□□ -0.69
NDE1-201ENST00000396354 TRMT44Q8IYL2 757 aaKnown RBP10.76□□□□□ -0.69
NDE1-201ENST00000396354 GRAMD1CQ8IYS0 662 aa10.76□□□□□ -0.69
NDE1-201ENST00000396354 CPLX3Q8WVH0 158 aa10.76□□□□□ -0.69
NDE1-201ENST00000396354 ZFP91Q96JP5 570 aaPredicted RBP10.76□□□□□ -0.69
NDE1-201ENST00000396354 CCDC87Q9NVE4 849 aa10.76□□□□□ -0.69
NDE1-201ENST00000396354 SPTLC2O15270 562 aa10.75□□□□□ -0.69
NDE1-201ENST00000396354 FOXN1O15353 648 aa10.75□□□□□ -0.69
NDE1-201ENST00000396354 GPAA1O43292 621 aa10.75□□□□□ -0.69
NDE1-201ENST00000396354 PDE8AO60658 829 aa10.75□□□□□ -0.69
NDE1-201ENST00000396354 FGFR2P21802 821 aa10.75□□□□□ -0.69
NDE1-201ENST00000396354 SMARCC2Q8TAQ2 1214 aa10.75□□□□□ -0.69
NDE1-201ENST00000396354 SALL1Q9NSC2 1324 aa10.75□□□□□ -0.69
NDE1-201ENST00000396354 ERVV-1B6SEH8 477 aa10.75□□□□□ -0.69
NDE1-201ENST00000396354 SMIM22K7EJ46 135 aa10.75□□□□□ -0.69
NDE1-201ENST00000396354 CTDSPL2Q05D32 466 aa10.75□□□□□ -0.69
NDE1-201ENST00000396354 TBC1D10CQ8IV04 446 aa10.75□□□□□ -0.69
NDE1-201ENST00000396354 MIGA1Q8NAN2 632 aa10.75□□□□□ -0.69
NDE1-201ENST00000396354 CGNQ9P2M7 1197 aaKnown RBP10.75□□□□□ -0.69
NDE1-201ENST00000396354 DNAI1Q9UI46 699 aa10.75□□□□□ -0.69
NDE1-201ENST00000396354 KCNJ14Q9UNX9 436 aa10.75□□□□□ -0.69
NDE1-201ENST00000396354 TCRBV5S4A2TA0A5A2 114 aa10.75□□□□□ -0.69
NDE1-201ENST00000396354 NTSR2O95665 410 aa10.75□□□□□ -0.69
NDE1-201ENST00000396354 TPM3P06753 285 aa10.75□□□□□ -0.69
NDE1-201ENST00000396354 SFPQP23246 707 aaKnown RBP eCLIP10.75□□□□□ -0.69
NDE1-201ENST00000396354 LINC00116Q8NCU8 138 aa10.75□□□□□ -0.69
NDE1-201ENST00000396354 AKAP2Q9Y2D5 859 aa10.75□□□□□ -0.69
NDE1-201ENST00000396354 ZNF202O95125 648 aa10.74□□□□□ -0.69
NDE1-201ENST00000396354 SEPT12Q8IYM1 358 aa10.74□□□□□ -0.69
NDE1-201ENST00000396354 STAMQ92783 540 aa10.74□□□□□ -0.69
NDE1-201ENST00000396354 ALG1Q9BT22 464 aa10.74□□□□□ -0.69
NDE1-201ENST00000396354 SLC26A6Q9BXS9 759 aa10.74□□□□□ -0.69
NDE1-201ENST00000396354 A0A1B0GUL6 1792 aa10.74□□□□□ -0.69
NDE1-201ENST00000396354 BCORQ6W2J9 1755 aa10.74□□□□□ -0.69
NDE1-201ENST00000396354 DOCK2Q92608 1830 aa10.74□□□□□ -0.69
NDE1-201ENST00000396354 URI1O94763 535 aaPredicted RBP10.74□□□□□ -0.69
NDE1-201ENST00000396354 ADD2P35612 726 aa10.74□□□□□ -0.69
NDE1-201ENST00000396354 RASGRF1Q13972 1273 aa10.74□□□□□ -0.69
NDE1-201ENST00000396354 MB21D2Q8IYB1 491 aaPredicted RBP10.74□□□□□ -0.69
NDE1-201ENST00000396354 APPBP2Q92624 585 aa10.74□□□□□ -0.69
NDE1-201ENST00000396354 NAT10Q9H0A0 1025 aaKnown RBP10.74□□□□□ -0.69
NDE1-201ENST00000396354 HPS5Q9UPZ3 1129 aa10.74□□□□□ -0.69
NDE1-201ENST00000396354 SMTNL1A8MU46 457 aa10.73□□□□□ -0.69
NDE1-201ENST00000396354 POLR3GO15318 223 aaPredicted RBP10.73□□□□□ -0.69
NDE1-201ENST00000396354 PFKFB1P16118 471 aa10.73□□□□□ -0.69
NDE1-201ENST00000396354 CDK11BP21127 795 aaKnown RBP10.73□□□□□ -0.69
NDE1-201ENST00000396354 CASP1P29466 404 aa10.73□□□□□ -0.69
NDE1-201ENST00000396354 DPF2Q92785 391 aa10.73□□□□□ -0.69
NDE1-201ENST00000396354 UTP14AQ9BVJ6 771 aaKnown RBP10.73□□□□□ -0.69
NDE1-201ENST00000396354 JAG2Q9Y219 1238 aa10.73□□□□□ -0.69
NDE1-201ENST00000396354 ZNF532Q9HCE3 1301 aa10.73□□□□□ -0.69
NDE1-201ENST00000396354 COL1A1P02452 1464 aaPredicted RBP10.73□□□□□ -0.69
NDE1-201ENST00000396354 BAZ2BQ9UIF8 2168 aaKnown RBP10.73□□□□□ -0.69
NDE1-201ENST00000396354 C4AP0C0L4 1744 aa10.73□□□□□ -0.69
NDE1-201ENST00000396354 C4BP0C0L5 1744 aa10.73□□□□□ -0.69
NDE1-201ENST00000396354 TMEM232C9JQI7 657 aa10.73□□□□□ -0.69
NDE1-201ENST00000396354 WDHD1O75717 1129 aaPredicted RBP10.73□□□□□ -0.69
NDE1-201ENST00000396354 METAP2P50579 478 aaKnown RBP eCLIP10.73□□□□□ -0.69
NDE1-201ENST00000396354 EPB41L4AQ9HCS5 686 aaPredicted RBP10.73□□□□□ -0.69
NDE1-201ENST00000396354 RCOR1Q9UKL0 485 aa10.73□□□□□ -0.69
NDE1-201ENST00000396354 LAMB2P55268 1798 aa10.73□□□□□ -0.69
NDE1-201ENST00000396354 CICQ96RK0 1608 aaPredicted RBP10.73□□□□□ -0.69
NDE1-201ENST00000396354 PDE6AP16499 860 aa10.73□□□□□ -0.69
NDE1-201ENST00000396354 BCAMP50895 628 aa10.73□□□□□ -0.69
NDE1-201ENST00000396354 STX17P56962 302 aa10.73□□□□□ -0.69
NDE1-201ENST00000396354 MYSM1Q5VVJ2 828 aa10.73□□□□□ -0.69
NDE1-201ENST00000396354 CYB5R4Q7L1T6 521 aa10.73□□□□□ -0.69
NDE1-201ENST00000396354 GPIHBP1Q8IV16 184 aa10.73□□□□□ -0.69
NDE1-201ENST00000396354 CCDC24Q8N4L8 307 aa10.73□□□□□ -0.69
NDE1-201ENST00000396354 THSD7AQ9UPZ6 1657 aa10.72□□□□□ -0.69
NDE1-201ENST00000396354 ECM29Q5VYK3 1845 aa10.72□□□□□ -0.69
NDE1-201ENST00000396354 MINDY4BA8MYZ0 360 aa10.72□□□□□ -0.69
NDE1-201ENST00000396354 ARID4AP29374 1257 aaPredicted RBP10.72□□□□□ -0.69
NDE1-201ENST00000396354 SYKP43405 635 aa10.72□□□□□ -0.69
NDE1-201ENST00000396354 KIF18AQ8NI77 898 aa10.72□□□□□ -0.69
NDE1-201ENST00000396354 DESI2Q9BSY9 194 aa10.72□□□□□ -0.69
NDE1-201ENST00000396354 ABCF2Q9UG63 623 aa10.72□□□□□ -0.69
NDE1-201ENST00000396354 NIP7Q9Y221 180 aaKnown RBP eCLIP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms