RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 CCDC114Q96M63 670 aa6.11□□□□□ -1.43
VPS13C-204ENST00000395898 ALDH1B1P30837 517 aa6.11□□□□□ -1.43
VPS13C-204ENST00000395898 ZNF569Q5MCW4 686 aa6.11□□□□□ -1.43
VPS13C-204ENST00000395898 RBM26Q5T8P6 1007 aaKnown RBP6.11□□□□□ -1.43
VPS13C-204ENST00000395898 CROCCP2Q86T23 111 aa6.11□□□□□ -1.43
VPS13C-204ENST00000395898 IQCDQ96DY2 449 aa6.11□□□□□ -1.43
VPS13C-204ENST00000395898 NUCKS1Q9H1E3 243 aaKnown RBP6.11□□□□□ -1.43
VPS13C-204ENST00000395898 DPH6Q7L8W6 267 aa6.11□□□□□ -1.43
VPS13C-204ENST00000395898 EYA2O00167 538 aa6.11□□□□□ -1.43
VPS13C-204ENST00000395898 POLR2DO15514 142 aaKnown RBP6.11□□□□□ -1.43
VPS13C-204ENST00000395898 MLKLQ8NB16 471 aa6.11□□□□□ -1.43
VPS13C-204ENST00000395898 LPIN2Q92539 896 aa6.11□□□□□ -1.43
VPS13C-204ENST00000395898 LZTFL1Q9NQ48 299 aa6.11□□□□□ -1.43
VPS13C-204ENST00000395898 TMEM110-MUSTN1A8MSY1 372 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 TNNI3KQ59H18 835 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 STIM2Q9P246 746 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 TTF2Q9UNY4 1162 aaKnown RBP6.1□□□□□ -1.43
VPS13C-204ENST00000395898 FPGT-TNNI3KV9GXZ4 949 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 ARHGEF10O15013 1369 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 ABCC2Q92887 1545 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 ERCC6LQ2NKX8 1250 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 CCDC122Q5T0U0 273 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 DAAM2Q86T65 1068 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 ZKSCAN3Q9BRR0 538 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 A0A1B0GVL5 298 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 TRAF5O00463 557 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 TBC1D8BQ0IIM8 1120 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 SETDB1Q15047 1291 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 BTG4Q9NY30 223 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 ZRANB1Q9UGI0 708 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 SH3TC1Q8TE82 1336 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 KRT5P13647 590 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 ERCC5P28715 1186 aaPredicted RBP6.1□□□□□ -1.43
VPS13C-204ENST00000395898 CCT6AP40227 531 aaKnown RBP6.1□□□□□ -1.43
VPS13C-204ENST00000395898 PSMC4P43686 418 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 RAPGEF1Q13905 1077 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 SLC9C1Q4G0N8 1177 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 PPP1R9BQ96SB3 815 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 SAMD15Q9P1V8 674 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 TBX22Q9Y458 520 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 KIF24Q5T7B8 1368 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 SBNO2Q9Y2G9 1366 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 MAP3K19Q56UN5 1328 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 GMNNO75496 209 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 MBD4O95243 580 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 CFAP157Q5JU67 520 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 FAM89AQ96GI7 184 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 GGA1Q9UJY5 639 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 ZBTB21Q9ULJ3 1066 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 GNPATO15228 680 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 PDE4DQ08499 809 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 MKRN1Q9UHC7 482 aaKnown RBP6.1□□□□□ -1.43
VPS13C-204ENST00000395898 SUPT20HQ8NEM7 779 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 ZNF830Q96NB3 372 aaPredicted RBP6.1□□□□□ -1.43
VPS13C-204ENST00000395898 TRIM6Q9C030 488 aaPredicted RBP6.1□□□□□ -1.43
VPS13C-204ENST00000395898 PRDM10Q9NQV6 1147 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 ANAPC4Q9UJX5 808 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 GNA14O95837 355 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 CCDC121Q6ZUS5 278 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 CCDC84Q86UT8 332 aaPredicted RBP6.1□□□□□ -1.43
VPS13C-204ENST00000395898 TBC1D22AQ8WUA7 517 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 FEZ2Q9UHY8 353 aaPredicted RBP6.1□□□□□ -1.43
VPS13C-204ENST00000395898 ATP10AO60312 1499 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 SLC27A2O14975 620 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 GPAA1O43292 621 aa6.1□□□□□ -1.43
VPS13C-204ENST00000395898 XRCC6P12956 609 aaKnown RBP eCLIP6.1□□□□□ -1.43
VPS13C-204ENST00000395898 KBTBD3Q8NAB2 608 aa6.09□□□□□ -1.43
VPS13C-204ENST00000395898 IFT81Q8WYA0 676 aa6.09□□□□□ -1.43
VPS13C-204ENST00000395898 NOX5Q96PH1 765 aa6.09□□□□□ -1.43
VPS13C-204ENST00000395898 RIMBP2O15034 1052 aa6.09□□□□□ -1.43
VPS13C-204ENST00000395898 CUTAO60888 179 aa6.09□□□□□ -1.43
VPS13C-204ENST00000395898 STK10O94804 968 aaKnown RBP6.09□□□□□ -1.43
VPS13C-204ENST00000395898 LIN9Q5TKA1 542 aa6.09□□□□□ -1.43
VPS13C-204ENST00000395898 B4GALNT4Q76KP1 1039 aa6.09□□□□□ -1.43
VPS13C-204ENST00000395898 TAOK1Q7L7X3 1001 aa6.09□□□□□ -1.43
VPS13C-204ENST00000395898 RNF216Q9NWF9 866 aaPredicted RBP6.09□□□□□ -1.43
VPS13C-204ENST00000395898 KCNH3Q9ULD8 1083 aa6.09□□□□□ -1.43
VPS13C-204ENST00000395898 E7EVH7 732 aa6.09□□□□□ -1.43
VPS13C-204ENST00000395898 CETN3O15182 167 aa6.09□□□□□ -1.43
VPS13C-204ENST00000395898 ZWINTO95229 277 aa6.09□□□□□ -1.43
VPS13C-204ENST00000395898 STX17P56962 302 aa6.09□□□□□ -1.43
VPS13C-204ENST00000395898 NBPF11Q86T75 865 aa6.09□□□□□ -1.43
VPS13C-204ENST00000395898 HELBQ8NG08 1087 aaPredicted RBP6.09□□□□□ -1.43
VPS13C-204ENST00000395898 LEO1Q8WVC0 666 aaPredicted RBP6.09□□□□□ -1.43
VPS13C-204ENST00000395898 KIFC2Q96AC6 838 aa6.09□□□□□ -1.43
VPS13C-204ENST00000395898 TBC1D31Q96DN5 1066 aa6.09□□□□□ -1.43
VPS13C-204ENST00000395898 SLC52A2Q9HAB3 445 aa6.09□□□□□ -1.43
VPS13C-204ENST00000395898 DNM3Q9UQ16 869 aa6.09□□□□□ -1.43
VPS13C-204ENST00000395898 RXRAP19793 462 aa6.09□□□□□ -1.43
VPS13C-204ENST00000395898 PDE6BP35913 854 aa6.09□□□□□ -1.43
VPS13C-204ENST00000395898 SYCE1Q8N0S2 351 aa6.09□□□□□ -1.43
VPS13C-204ENST00000395898 FAM76AQ8TAV0 307 aa6.09□□□□□ -1.43
VPS13C-204ENST00000395898 TESK2Q96S53 571 aa6.09□□□□□ -1.43
VPS13C-204ENST00000395898 H0YIN7 160 aa6.09□□□□□ -1.43
VPS13C-204ENST00000395898 NOP56O00567 594 aaKnown RBP6.09□□□□□ -1.43
VPS13C-204ENST00000395898 TIMM10P62072 90 aa6.09□□□□□ -1.43
VPS13C-204ENST00000395898 PAK1Q13153 545 aa6.09□□□□□ -1.43
VPS13C-204ENST00000395898 TRPC3Q13507 836 aa6.09□□□□□ -1.43
VPS13C-204ENST00000395898 CALCRLQ16602 461 aa6.09□□□□□ -1.43
VPS13C-204ENST00000395898 ANO1Q5XXA6 986 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms