RNA–Protein interactions for RNA: ENST00000395305.7

HLA-DMA-203, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-203ENST00000395305 OTUD7BQ6GQQ9 843 aa17.07■□□□□ 0.32
HLA-DMA-203ENST00000395305 SH3BP5LQ7L8J4 393 aa17.07■□□□□ 0.32
HLA-DMA-203ENST00000395305 ERO1BQ86YB8 467 aa17.07■□□□□ 0.32
HLA-DMA-203ENST00000395305 IFNL1Q8IU54 200 aa17.07■□□□□ 0.32
HLA-DMA-203ENST00000395305 ZSCAN29Q8IWY8 852 aaPredicted RBP17.07■□□□□ 0.32
HLA-DMA-203ENST00000395305 ZKSCAN4Q969J2 545 aaPredicted RBP17.07■□□□□ 0.32
HLA-DMA-203ENST00000395305 RFX7Q2KHR2 1363 aa17.06■□□□□ 0.32
HLA-DMA-203ENST00000395305 SPDYE5A6NIY4 337 aa17.06■□□□□ 0.32
HLA-DMA-203ENST00000395305 PLCG2P16885 1265 aa17.06■□□□□ 0.32
HLA-DMA-203ENST00000395305 GTF2A2P52657 109 aa17.06■□□□□ 0.32
HLA-DMA-203ENST00000395305 NOM1Q5C9Z4 860 aaKnown RBP17.06■□□□□ 0.32
HLA-DMA-203ENST00000395305 TMED8Q6PL24 325 aaPredicted RBP17.06■□□□□ 0.32
HLA-DMA-203ENST00000395305 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.06■□□□□ 0.32
HLA-DMA-203ENST00000395305 MS4A4AQ96JQ5 239 aa17.06■□□□□ 0.32
HLA-DMA-203ENST00000395305 SNCAIPQ9Y6H5 919 aa17.06■□□□□ 0.32
HLA-DMA-203ENST00000395305 DDTLA6NHG4 134 aaPredicted RBP17.05■□□□□ 0.32
HLA-DMA-203ENST00000395305 PICALMQ13492 652 aa17.05■□□□□ 0.32
HLA-DMA-203ENST00000395305 TEX11Q8IYF3 940 aa17.05■□□□□ 0.32
HLA-DMA-203ENST00000395305 CNKSR2Q8WXI2 1034 aa17.05■□□□□ 0.32
HLA-DMA-203ENST00000395305 LRRCC1Q9C099 1032 aa17.05■□□□□ 0.32
HLA-DMA-203ENST00000395305 DCTPP1Q9H773 170 aa17.05■□□□□ 0.32
HLA-DMA-203ENST00000395305 OTOFQ9HC10 1997 aa17.04■□□□□ 0.32
HLA-DMA-203ENST00000395305 PHF20L1A8MW92 1017 aa17.04■□□□□ 0.32
HLA-DMA-203ENST00000395305 IGF2BP3O00425 579 aaKnown RBP eCLIP17.04■□□□□ 0.32
HLA-DMA-203ENST00000395305 TBC1D12O60347 775 aa17.04■□□□□ 0.32
HLA-DMA-203ENST00000395305 IDH1O75874 414 aaKnown RBP17.04■□□□□ 0.32
HLA-DMA-203ENST00000395305 INPP5BP32019 993 aa17.04■□□□□ 0.32
HLA-DMA-203ENST00000395305 MAP3K12Q12852 859 aa17.04■□□□□ 0.32
HLA-DMA-203ENST00000395305 TTF1Q15361 905 aaPredicted RBP17.04■□□□□ 0.32
HLA-DMA-203ENST00000395305 SH3RF3Q8TEJ3 882 aaPredicted RBP17.04■□□□□ 0.32
HLA-DMA-203ENST00000395305 OTUD5Q96G74 571 aa17.04■□□□□ 0.32
HLA-DMA-203ENST00000395305 PTPN18Q99952 460 aa17.04■□□□□ 0.32
HLA-DMA-203ENST00000395305 ANTXR1Q9H6X2 564 aa17.04■□□□□ 0.32
HLA-DMA-203ENST00000395305 AATFQ9NY61 560 aaKnown RBP eCLIP17.04■□□□□ 0.32
HLA-DMA-203ENST00000395305 ATRNL1Q5VV63 1379 aa17.03■□□□□ 0.32
HLA-DMA-203ENST00000395305 MYO5AQ9Y4I1 1855 aaKnown RBP17.03■□□□□ 0.32
HLA-DMA-203ENST00000395305 LAMB1P07942 1786 aa17.03■□□□□ 0.32
HLA-DMA-203ENST00000395305 GPR25O00155 361 aa17.03■□□□□ 0.32
HLA-DMA-203ENST00000395305 ATP5JP18859 108 aa17.03■□□□□ 0.32
HLA-DMA-203ENST00000395305 CYP7A1P22680 504 aa17.03■□□□□ 0.32
HLA-DMA-203ENST00000395305 PPATQ06203 517 aa17.03■□□□□ 0.32
HLA-DMA-203ENST00000395305 PPIL2Q13356 520 aa17.03■□□□□ 0.32
HLA-DMA-203ENST00000395305 NOL9Q5SY16 702 aaKnown RBP17.03■□□□□ 0.32
HLA-DMA-203ENST00000395305 ADGRA1Q86SQ6 560 aa17.03■□□□□ 0.32
HLA-DMA-203ENST00000395305 NDUFB9Q9Y6M9 179 aa17.03■□□□□ 0.32
HLA-DMA-203ENST00000395305 CERS3Q8IU89 383 aa17.02■□□□□ 0.32
HLA-DMA-203ENST00000395305 OSBPL5Q9H0X9 879 aaPredicted RBP17.02■□□□□ 0.32
HLA-DMA-203ENST00000395305 BCL11AQ9H165 835 aa17.02■□□□□ 0.32
HLA-DMA-203ENST00000395305 R3HDMLQ9H3Y0 253 aa17.02■□□□□ 0.32
HLA-DMA-203ENST00000395305 PCDHB15Q9Y5E8 787 aa17.02■□□□□ 0.32
HLA-DMA-203ENST00000395305 CCL15-CCL14A0A0B4J2E2 113 aa17.01■□□□□ 0.31
HLA-DMA-203ENST00000395305 IRF6O14896 467 aa17.01■□□□□ 0.31
HLA-DMA-203ENST00000395305 CETPP11597 493 aa17.01■□□□□ 0.31
HLA-DMA-203ENST00000395305 SNAPC2Q13487 334 aa17.01■□□□□ 0.31
HLA-DMA-203ENST00000395305 DGKZQ13574 1117 aa17.01■□□□□ 0.31
HLA-DMA-203ENST00000395305 CCL15Q16663 113 aa17.01■□□□□ 0.31
HLA-DMA-203ENST00000395305 MAGEB6Q8N7X4 407 aa17.01■□□□□ 0.31
HLA-DMA-203ENST00000395305 TGFBRAP1Q8WUH2 860 aa17.01■□□□□ 0.31
HLA-DMA-203ENST00000395305 ZNF296Q8WUU4 475 aaPredicted RBP17.01■□□□□ 0.31
HLA-DMA-203ENST00000395305 BRI3BPQ8WY22 251 aa17.01■□□□□ 0.31
HLA-DMA-203ENST00000395305 DHX36Q9H2U1 1008 aaKnown RBP17.01■□□□□ 0.31
HLA-DMA-203ENST00000395305 COL2A1P02458 1487 aaPredicted RBP17■□□□□ 0.31
HLA-DMA-203ENST00000395305 SMARCA5O60264 1052 aaPredicted RBP17■□□□□ 0.31
HLA-DMA-203ENST00000395305 CTNND1O60716 968 aaKnown RBP17■□□□□ 0.31
HLA-DMA-203ENST00000395305 DYNLL1P63167 89 aaKnown RBP17■□□□□ 0.31
HLA-DMA-203ENST00000395305 SCYL3Q8IZE3 742 aa17■□□□□ 0.31
HLA-DMA-203ENST00000395305 ABHD8Q96I13 439 aa17■□□□□ 0.31
HLA-DMA-203ENST00000395305 MCOLN1Q9GZU1 580 aa17■□□□□ 0.31
HLA-DMA-203ENST00000395305 PI4KBQ9UBF8 816 aa17■□□□□ 0.31
HLA-DMA-203ENST00000395305 FKTNO75072 461 aa16.99■□□□□ 0.31
HLA-DMA-203ENST00000395305 SLC9C2Q5TAH2 1124 aa16.99■□□□□ 0.31
HLA-DMA-203ENST00000395305 CRBNQ96SW2 442 aa16.99■□□□□ 0.31
HLA-DMA-203ENST00000395305 DNAJC2Q99543 621 aaKnown RBP16.99■□□□□ 0.31
HLA-DMA-203ENST00000395305 HAUS7Q99871 368 aa16.99■□□□□ 0.31
HLA-DMA-203ENST00000395305 BOLA2Q9H3K6 86 aa16.99■□□□□ 0.31
HLA-DMA-203ENST00000395305 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.99■□□□□ 0.31
HLA-DMA-203ENST00000395305 ZCCHC17Q9NP64 241 aaKnown RBP16.99■□□□□ 0.31
HLA-DMA-203ENST00000395305 PICK1Q9NRD5 415 aa16.99■□□□□ 0.31
HLA-DMA-203ENST00000395305 KCNH4Q9UQ05 1017 aa16.99■□□□□ 0.31
HLA-DMA-203ENST00000395305 MAST2Q6P0Q8 1798 aa16.99■□□□□ 0.31
HLA-DMA-203ENST00000395305 GOLIM4O00461 696 aa16.98■□□□□ 0.31
HLA-DMA-203ENST00000395305 CXCL11O14625 94 aa16.98■□□□□ 0.31
HLA-DMA-203ENST00000395305 SLURP2P0DP57 97 aa16.98■□□□□ 0.31
HLA-DMA-203ENST00000395305 PTPRAP18433 802 aa16.98■□□□□ 0.31
HLA-DMA-203ENST00000395305 CTU1Q7Z7A3 348 aaKnown RBP16.98■□□□□ 0.31
HLA-DMA-203ENST00000395305 FOXP4Q8IVH2 680 aaPredicted RBP16.98■□□□□ 0.31
HLA-DMA-203ENST00000395305 MAPKAPK5Q8IW41 473 aa16.98■□□□□ 0.31
HLA-DMA-203ENST00000395305 PAG1Q9NWQ8 432 aa16.98■□□□□ 0.31
HLA-DMA-203ENST00000395305 HERC5Q9UII4 1024 aaKnown RBP16.98■□□□□ 0.31
HLA-DMA-203ENST00000395305 DOCK2Q92608 1830 aa16.98■□□□□ 0.31
HLA-DMA-203ENST00000395305 CAPN15O75808 1086 aa16.97■□□□□ 0.31
HLA-DMA-203ENST00000395305 PDE6AP16499 860 aa16.97■□□□□ 0.31
HLA-DMA-203ENST00000395305 CRHR2Q13324 411 aa16.97■□□□□ 0.31
HLA-DMA-203ENST00000395305 AAMPQ13685 434 aa16.97■□□□□ 0.31
HLA-DMA-203ENST00000395305 METTL16Q86W50 562 aaKnown RBP16.97■□□□□ 0.31
HLA-DMA-203ENST00000395305 FAM43AQ8N2R8 423 aa16.97■□□□□ 0.31
HLA-DMA-203ENST00000395305 MIGA1Q8NAN2 632 aa16.97■□□□□ 0.31
HLA-DMA-203ENST00000395305 ZFYVE28Q9HCC9 887 aa16.97■□□□□ 0.31
HLA-DMA-203ENST00000395305 ECHDC1Q9NTX5 307 aa16.97■□□□□ 0.31
HLA-DMA-203ENST00000395305 FLT1P17948 1338 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms