RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 DOT1LQ8TEK3 1739 aa22.67■■□□□ 1.22
RCCD1-201ENST00000394258 PFKFB1P16118 471 aa22.66■■□□□ 1.22
RCCD1-201ENST00000394258 CHAF1AQ13111 956 aaPredicted RBP22.66■■□□□ 1.22
RCCD1-201ENST00000394258 NTRK3Q16288 839 aa22.66■■□□□ 1.22
RCCD1-201ENST00000394258 AKNAD1Q5T1N1 836 aa22.66■■□□□ 1.22
RCCD1-201ENST00000394258 AK7Q96M32 723 aa22.66■■□□□ 1.22
RCCD1-201ENST00000394258 SPATA31A1Q5TZJ5 1347 aa22.66■■□□□ 1.22
RCCD1-201ENST00000394258 USP27XA6NNY8 438 aa22.66■■□□□ 1.22
RCCD1-201ENST00000394258 NTSR2O95665 410 aa22.66■■□□□ 1.22
RCCD1-201ENST00000394258 LRRC8AQ8IWT6 810 aa22.66■■□□□ 1.22
RCCD1-201ENST00000394258 SMIM22K7EJ46 135 aa22.65■■□□□ 1.22
RCCD1-201ENST00000394258 ALX1Q15699 326 aa22.65■■□□□ 1.22
RCCD1-201ENST00000394258 BICDL1Q6ZP65 573 aa22.65■■□□□ 1.22
RCCD1-201ENST00000394258 MROH7-TTC4A0A0A0MT08 1334 aa22.65■■□□□ 1.22
RCCD1-201ENST00000394258 SLC3A2P08195 630 aaKnown RBP22.65■■□□□ 1.22
RCCD1-201ENST00000394258 CDC25BP30305 580 aa22.65■■□□□ 1.22
RCCD1-201ENST00000394258 GYG1P46976 350 aa22.65■■□□□ 1.22
RCCD1-201ENST00000394258 CLIC6Q96NY7 704 aa22.65■■□□□ 1.22
RCCD1-201ENST00000394258 GUCY1A2P33402 732 aa22.65■■□□□ 1.22
RCCD1-201ENST00000394258 TRIM29Q14134 588 aa22.65■■□□□ 1.22
RCCD1-201ENST00000394258 SLC39A14Q15043 492 aa22.65■■□□□ 1.22
RCCD1-201ENST00000394258 PARP10Q53GL7 1025 aa22.65■■□□□ 1.22
RCCD1-201ENST00000394258 SDR42E1Q8WUS8 393 aa22.65■■□□□ 1.22
RCCD1-201ENST00000394258 MRFAP1L1Q96HT8 127 aa22.65■■□□□ 1.22
RCCD1-201ENST00000394258 MINDY4BA8MYZ0 360 aa22.64■■□□□ 1.21
RCCD1-201ENST00000394258 C3orf67Q6ZVT6 689 aa22.64■■□□□ 1.21
RCCD1-201ENST00000394258 ADGRA1Q86SQ6 560 aa22.64■■□□□ 1.21
RCCD1-201ENST00000394258 TNNT1P13805 278 aa22.64■■□□□ 1.21
RCCD1-201ENST00000394258 TPD52L1Q16890 204 aaPredicted RBP22.64■■□□□ 1.21
RCCD1-201ENST00000394258 NACAP1Q9BZK3 213 aa22.64■■□□□ 1.21
RCCD1-201ENST00000394258 NAT10Q9H0A0 1025 aaKnown RBP22.64■■□□□ 1.21
RCCD1-201ENST00000394258 C4AP0C0L4 1744 aa22.63■■□□□ 1.21
RCCD1-201ENST00000394258 C4BP0C0L5 1744 aa22.63■■□□□ 1.21
RCCD1-201ENST00000394258 MYH14Q7Z406 1995 aaKnown RBP22.63■■□□□ 1.21
RCCD1-201ENST00000394258 CYP7A1P22680 504 aa22.63■■□□□ 1.21
RCCD1-201ENST00000394258 SGMS1Q86VZ5 419 aa22.63■■□□□ 1.21
RCCD1-201ENST00000394258 CMA1P23946 247 aa22.63■■□□□ 1.21
RCCD1-201ENST00000394258 SSRP1Q08945 709 aaKnown RBP22.63■■□□□ 1.21
RCCD1-201ENST00000394258 NUP133Q8WUM0 1156 aa22.63■■□□□ 1.21
RCCD1-201ENST00000394258 RAI14Q9P0K7 980 aa22.63■■□□□ 1.21
RCCD1-201ENST00000394258 COL16A1Q07092 1604 aaPredicted RBP22.63■■□□□ 1.21
RCCD1-201ENST00000394258 DDX60Q8IY21 1712 aaKnown RBP22.62■■□□□ 1.21
RCCD1-201ENST00000394258 KCNJ14Q9UNX9 436 aa22.62■■□□□ 1.21
RCCD1-201ENST00000394258 LIFRP42702 1097 aa22.62■■□□□ 1.21
RCCD1-201ENST00000394258 ERFEQ4G0M1 354 aa22.62■■□□□ 1.21
RCCD1-201ENST00000394258 ZNF592Q92610 1267 aa22.61■■□□□ 1.21
RCCD1-201ENST00000394258 KRT23Q9C075 422 aa22.61■■□□□ 1.21
RCCD1-201ENST00000394258 CNNM2Q9H8M5 875 aa22.61■■□□□ 1.21
RCCD1-201ENST00000394258 ROBO1Q9Y6N7 1651 aa22.61■■□□□ 1.21
RCCD1-201ENST00000394258 SYKP43405 635 aa22.61■■□□□ 1.21
RCCD1-201ENST00000394258 SPECC1Q5M775 1068 aa22.61■■□□□ 1.21
RCCD1-201ENST00000394258 SHC4Q6S5L8 630 aa22.61■■□□□ 1.21
RCCD1-201ENST00000394258 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.61■■□□□ 1.21
RCCD1-201ENST00000394258 BTBD18B2RXH4 712 aa22.6■■□□□ 1.21
RCCD1-201ENST00000394258 SKILP12757 684 aa22.6■■□□□ 1.21
RCCD1-201ENST00000394258 NAA30Q147X3 362 aaPredicted RBP22.6■■□□□ 1.21
RCCD1-201ENST00000394258 WTAPQ15007 396 aa22.6■■□□□ 1.21
RCCD1-201ENST00000394258 NBPF11Q86T75 865 aa22.6■■□□□ 1.21
RCCD1-201ENST00000394258 CDCA7Q9BWT1 371 aaPredicted RBP22.6■■□□□ 1.21
RCCD1-201ENST00000394258 TRMT1Q9NXH9 659 aaKnown RBP22.6■■□□□ 1.21
RCCD1-201ENST00000394258 PTPAQ15257 358 aa22.6■■□□□ 1.21
RCCD1-201ENST00000394258 COL4A1P02462 1669 aa22.59■■□□□ 1.21
RCCD1-201ENST00000394258 MAP3K14Q99558 947 aa22.59■■□□□ 1.21
RCCD1-201ENST00000394258 LRP5O75197 1615 aa22.58■■□□□ 1.21
RCCD1-201ENST00000394258 ERICH2A1L162 156 aa22.58■■□□□ 1.21
RCCD1-201ENST00000394258 ATP2B1P20020 1258 aa22.58■■□□□ 1.21
RCCD1-201ENST00000394258 GTF2E1P29083 439 aaPredicted RBP22.58■■□□□ 1.21
RCCD1-201ENST00000394258 CCZ1BP86790 482 aa22.58■■□□□ 1.21
RCCD1-201ENST00000394258 CCZ1P86791 482 aaPredicted RBP22.58■■□□□ 1.21
RCCD1-201ENST00000394258 SART3Q15020 963 aaKnown RBP22.58■■□□□ 1.21
RCCD1-201ENST00000394258 RTN1Q16799 776 aa22.58■■□□□ 1.21
RCCD1-201ENST00000394258 CYP2D7A0A087X1C5 515 aa22.58■■□□□ 1.2
RCCD1-201ENST00000394258 SMC2O95347 1197 aa22.58■■□□□ 1.2
RCCD1-201ENST00000394258 GNAT2P19087 354 aa22.58■■□□□ 1.2
RCCD1-201ENST00000394258 U2AF2P26368 475 aaKnown RBP eCLIP22.58■■□□□ 1.23e-10■■■□□ 17.3
RCCD1-201ENST00000394258 CCDC24Q8N4L8 307 aa22.58■■□□□ 1.2
RCCD1-201ENST00000394258 STAG1Q8WVM7 1258 aa22.58■■□□□ 1.2
RCCD1-201ENST00000394258 CDC5LQ99459 802 aaKnown RBP22.58■■□□□ 1.2
RCCD1-201ENST00000394258 FMNL1O95466 1100 aaPredicted RBP22.57■■□□□ 1.2
RCCD1-201ENST00000394258 PPARAQ07869 468 aa22.57■■□□□ 1.2
RCCD1-201ENST00000394258 ANKRD18AQ8IVF6 992 aa22.57■■□□□ 1.2
RCCD1-201ENST00000394258 PNOCQ13519 176 aa22.57■■□□□ 1.2
RCCD1-201ENST00000394258 XPO4Q9C0E2 1151 aaKnown RBP22.57■■□□□ 1.2
RCCD1-201ENST00000394258 IFNKQ9P0W0 207 aa22.57■■□□□ 1.2
RCCD1-201ENST00000394258 TAF1P21675 1872 aa22.57■■□□□ 1.2
RCCD1-201ENST00000394258 PNPLA7Q6ZV29 1317 aa22.57■■□□□ 1.2
RCCD1-201ENST00000394258 UBAC1Q9BSL1 405 aa22.56■■□□□ 1.2
RCCD1-201ENST00000394258 ZNF652Q9Y2D9 606 aa22.56■■□□□ 1.2
RCCD1-201ENST00000394258 MAGEB6P1A0A0J9YX57 407 aa22.56■■□□□ 1.2
RCCD1-201ENST00000394258 CTIFO43310 598 aaKnown RBP22.56■■□□□ 1.2
RCCD1-201ENST00000394258 PRDM1O75626 825 aa22.56■■□□□ 1.2
RCCD1-201ENST00000394258 IFNAR1P17181 557 aa22.56■■□□□ 1.2
RCCD1-201ENST00000394258 NLRP12P59046 1061 aa22.56■■□□□ 1.2
RCCD1-201ENST00000394258 DYNLL1P63167 89 aaKnown RBP22.56■■□□□ 1.2
RCCD1-201ENST00000394258 DIS3L2Q8IYB7 885 aaKnown RBP22.56■■□□□ 1.2
RCCD1-201ENST00000394258 JMYQ8N9B5 988 aa22.56■■□□□ 1.2
RCCD1-201ENST00000394258 LMOD1P29536 600 aaPredicted RBP22.55■■□□□ 1.2
RCCD1-201ENST00000394258 NR5A1Q13285 461 aa22.55■■□□□ 1.2
RCCD1-201ENST00000394258 TRIM22Q8IYM9 498 aa22.55■■□□□ 1.2
RCCD1-201ENST00000394258 THRAP3Q9Y2W1 955 aaKnown RBP22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms