RNA–Protein interactions for RNA: ENST00000394221.2

DHFR2-202, Transcript of dihydrofolate reductase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR2, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR2-202ENST00000394221 AFAP1Q8N556 730 aa9.59□□□□□ -0.87
DHFR2-202ENST00000394221 CCHCR1Q8TD31 782 aa9.59□□□□□ -0.87
DHFR2-202ENST00000394221 NOP53Q9NZM5 478 aaKnown RBP9.59□□□□□ -0.87
DHFR2-202ENST00000394221 FANCAO15360 1455 aa9.59□□□□□ -0.87
DHFR2-202ENST00000394221 MTX1Q13505 466 aa9.59□□□□□ -0.87
DHFR2-202ENST00000394221 TMEM132AQ24JP5 1023 aa9.59□□□□□ -0.87
DHFR2-202ENST00000394221 TWISTNBQ3B726 338 aaPredicted RBP9.59□□□□□ -0.87
DHFR2-202ENST00000394221 CUL5Q93034 780 aa9.59□□□□□ -0.87
DHFR2-202ENST00000394221 RBM41Q96IZ5 413 aaKnown RBP9.59□□□□□ -0.87
DHFR2-202ENST00000394221 BPIFA3Q9BQP9 254 aa9.59□□□□□ -0.87
DHFR2-202ENST00000394221 INCENPQ9NQS7 918 aa9.59□□□□□ -0.87
DHFR2-202ENST00000394221 RTEL1Q9NZ71 1219 aa9.59□□□□□ -0.87
DHFR2-202ENST00000394221 MYO1AQ9UBC5 1043 aa9.59□□□□□ -0.87
DHFR2-202ENST00000394221 C9orf84Q5VXU9 1444 aa9.59□□□□□ -0.87
DHFR2-202ENST00000394221 CTCFP49711 727 aaPredicted RBP9.59□□□□□ -0.87
DHFR2-202ENST00000394221 FAM228AQ86W67 206 aa9.59□□□□□ -0.87
DHFR2-202ENST00000394221 NOA1Q8NC60 698 aaKnown RBP9.59□□□□□ -0.87
DHFR2-202ENST00000394221 ARHGEF1Q92888 912 aaKnown RBP9.59□□□□□ -0.87
DHFR2-202ENST00000394221 LZTS2Q9BRK4 669 aa9.59□□□□□ -0.87
DHFR2-202ENST00000394221 SELENOOQ9BVL4 669 aa9.59□□□□□ -0.87
DHFR2-202ENST00000394221 EPN3Q9H201 632 aa9.59□□□□□ -0.87
DHFR2-202ENST00000394221 HSF2BPO75031 334 aa9.59□□□□□ -0.87
DHFR2-202ENST00000394221 ATP6V1G1O75348 118 aa9.59□□□□□ -0.87
DHFR2-202ENST00000394221 RNF8O76064 485 aa9.59□□□□□ -0.87
DHFR2-202ENST00000394221 CDC25CP30307 473 aa9.59□□□□□ -0.87
DHFR2-202ENST00000394221 RNF168Q8IYW5 571 aaPredicted RBP9.59□□□□□ -0.87
DHFR2-202ENST00000394221 LIN7AO14910 233 aaPredicted RBP9.58□□□□□ -0.88
DHFR2-202ENST00000394221 SLC4A2P04920 1241 aa9.58□□□□□ -0.88
DHFR2-202ENST00000394221 SLC3A2P08195 630 aaKnown RBP9.58□□□□□ -0.88
DHFR2-202ENST00000394221 CSB-PGBD3P0DP91 1061 aa9.58□□□□□ -0.88
DHFR2-202ENST00000394221 SYCP3Q8IZU3 236 aa9.58□□□□□ -0.88
DHFR2-202ENST00000394221 CAGE1Q8TC20 777 aa9.58□□□□□ -0.88
DHFR2-202ENST00000394221 MKL1Q969V6 931 aa9.58□□□□□ -0.88
DHFR2-202ENST00000394221 ZFATQ9P243 1243 aa9.58□□□□□ -0.88
DHFR2-202ENST00000394221 GIGYF1O75420 1035 aaPredicted RBP9.58□□□□□ -0.88
DHFR2-202ENST00000394221 ANP32DO95626 131 aa9.58□□□□□ -0.88
DHFR2-202ENST00000394221 ATP6V1G2O95670 118 aa9.58□□□□□ -0.88
DHFR2-202ENST00000394221 ATP1A3P13637 1013 aa9.58□□□□□ -0.88
DHFR2-202ENST00000394221 SCNN1BP51168 640 aa9.58□□□□□ -0.88
DHFR2-202ENST00000394221 G3BP1Q13283 466 aaKnown RBP eCLIP9.58□□□□□ -0.88
DHFR2-202ENST00000394221 DYNC1I2Q13409 638 aaKnown RBP9.58□□□□□ -0.88
DHFR2-202ENST00000394221 EHBP1Q8NDI1 1231 aa9.58□□□□□ -0.88
DHFR2-202ENST00000394221 FANCLQ9NW38 375 aa9.58□□□□□ -0.88
DHFR2-202ENST00000394221 TRAPPC8Q9Y2L5 1435 aa9.58□□□□□ -0.88
DHFR2-202ENST00000394221 RASSF10A6NK89 507 aa9.58□□□□□ -0.88
DHFR2-202ENST00000394221 E7EVH7 732 aa9.58□□□□□ -0.88
DHFR2-202ENST00000394221 MYO1BO43795 1136 aa9.58□□□□□ -0.88
DHFR2-202ENST00000394221 HDGFP51858 240 aaKnown RBP9.58□□□□□ -0.88
DHFR2-202ENST00000394221 USP14P54578 494 aa9.58□□□□□ -0.88
DHFR2-202ENST00000394221 NLRP12P59046 1061 aa9.58□□□□□ -0.88
DHFR2-202ENST00000394221 SKOR1P84550 965 aa9.58□□□□□ -0.88
DHFR2-202ENST00000394221 PPP1R7Q15435 360 aa9.58□□□□□ -0.88
DHFR2-202ENST00000394221 HSP90AB4PQ58FF6 505 aa9.58□□□□□ -0.88
DHFR2-202ENST00000394221 HIBCHQ6NVY1 386 aaPredicted RBP9.58□□□□□ -0.88
DHFR2-202ENST00000394221 SND1Q7KZF4 910 aaKnown RBP eCLIP9.58□□□□□ -0.88
DHFR2-202ENST00000394221 ARL10Q8N8L6 244 aa9.58□□□□□ -0.88
DHFR2-202ENST00000394221 DDX54Q8TDD1 881 aaKnown RBP9.58□□□□□ -0.88
DHFR2-202ENST00000394221 SH3GL2Q99962 352 aa9.58□□□□□ -0.88
DHFR2-202ENST00000394221 OSBPL1AQ9BXW6 950 aa9.58□□□□□ -0.88
DHFR2-202ENST00000394221 U3KPZ7 1027 aaPredicted RBP9.58□□□□□ -0.88
DHFR2-202ENST00000394221 B4DLN1 442 aa9.57□□□□□ -0.88
DHFR2-202ENST00000394221 LSP1P33241 339 aa9.57□□□□□ -0.88
DHFR2-202ENST00000394221 NLRP14Q86W24 1093 aa9.57□□□□□ -0.88
DHFR2-202ENST00000394221 SLC35F6Q8N357 371 aa9.57□□□□□ -0.88
DHFR2-202ENST00000394221 MRPS27Q92552 414 aaKnown RBP9.57□□□□□ -0.88
DHFR2-202ENST00000394221 ACSBG1Q96GR2 724 aa9.57□□□□□ -0.88
DHFR2-202ENST00000394221 FAM167BQ9BTA0 163 aa9.57□□□□□ -0.88
DHFR2-202ENST00000394221 YIPF2Q9BWQ6 316 aa9.57□□□□□ -0.88
DHFR2-202ENST00000394221 GOLPH3LQ9H4A5 285 aa9.57□□□□□ -0.88
DHFR2-202ENST00000394221 MRPL44Q9H9J2 332 aaKnown RBP9.57□□□□□ -0.88
DHFR2-202ENST00000394221 KIAA1468Q9P260 1216 aa9.57□□□□□ -0.88
DHFR2-202ENST00000394221 SHPRHQ149N8 1683 aa9.57□□□□□ -0.88
DHFR2-202ENST00000394221 KDM5AP29375 1690 aaKnown RBP9.57□□□□□ -0.88
DHFR2-202ENST00000394221 ADKP55263 362 aaKnown RBP9.57□□□□□ -0.88
DHFR2-202ENST00000394221 ANKRD1Q15327 319 aa9.57□□□□□ -0.88
DHFR2-202ENST00000394221 OLFM4Q6UX06 510 aa9.57□□□□□ -0.88
DHFR2-202ENST00000394221 PNMA8AQ86V59 439 aaPredicted RBP9.57□□□□□ -0.88
DHFR2-202ENST00000394221 TSPYL6Q8N831 410 aa9.57□□□□□ -0.88
DHFR2-202ENST00000394221 RBM33Q96EV2 1170 aaKnown RBP9.57□□□□□ -0.88
DHFR2-202ENST00000394221 PAGR1Q9BTK6 254 aa9.57□□□□□ -0.88
DHFR2-202ENST00000394221 NUP58Q9BVL2 599 aa9.57□□□□□ -0.88
DHFR2-202ENST00000394221 ZCWPW1Q9H0M4 648 aa9.57□□□□□ -0.88
DHFR2-202ENST00000394221 RANBP17Q9H2T7 1088 aaKnown RBP9.57□□□□□ -0.88
DHFR2-202ENST00000394221 GGA2Q9UJY4 613 aa9.57□□□□□ -0.88
DHFR2-202ENST00000394221 TARBP1Q13395 1621 aaKnown RBP9.57□□□□□ -0.88
DHFR2-202ENST00000394221 DESP17661 470 aa9.57□□□□□ -0.88
DHFR2-202ENST00000394221 ATP4AP20648 1035 aa9.57□□□□□ -0.88
DHFR2-202ENST00000394221 ZBED6P86452 979 aa9.57□□□□□ -0.88
DHFR2-202ENST00000394221 STK3Q13188 491 aa9.57□□□□□ -0.88
DHFR2-202ENST00000394221 PTPN21Q16825 1174 aa9.57□□□□□ -0.88
DHFR2-202ENST00000394221 MTHFD1LQ6UB35 978 aa9.57□□□□□ -0.88
DHFR2-202ENST00000394221 GALNT15Q8N3T1 639 aa9.57□□□□□ -0.88
DHFR2-202ENST00000394221 C17orf50Q8WW18 174 aa9.57□□□□□ -0.88
DHFR2-202ENST00000394221 TEKT4Q8WW24 435 aa9.57□□□□□ -0.88
DHFR2-202ENST00000394221 RBM17Q96I25 401 aaKnown RBP9.57□□□□□ -0.88
DHFR2-202ENST00000394221 CCT8L2Q96SF2 557 aa9.57□□□□□ -0.88
DHFR2-202ENST00000394221 DNAAF2Q9NVR5 837 aaKnown RBP9.57□□□□□ -0.88
DHFR2-202ENST00000394221 CD109Q6YHK3 1445 aa9.57□□□□□ -0.88
DHFR2-202ENST00000394221 PPRC1Q5VV67 1664 aaKnown RBP9.57□□□□□ -0.88
DHFR2-202ENST00000394221 PPFIA3O75145 1194 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms