RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 TJP1Q07157 1748 aa11.45□□□□□ -0.58
PSEN1-204ENST00000394164 TBC1D8O95759 1140 aa11.45□□□□□ -0.58
PSEN1-204ENST00000394164 PDE6AP16499 860 aa11.45□□□□□ -0.58
PSEN1-204ENST00000394164 STK38Q15208 465 aa11.45□□□□□ -0.58
PSEN1-204ENST00000394164 ICE2Q659A1 982 aa11.45□□□□□ -0.58
PSEN1-204ENST00000394164 ARMCX5Q6P1M9 558 aa11.45□□□□□ -0.58
PSEN1-204ENST00000394164 CREBRFQ8IUR6 639 aa11.45□□□□□ -0.58
PSEN1-204ENST00000394164 SDF4Q9BRK5 362 aa11.45□□□□□ -0.58
PSEN1-204ENST00000394164 NBPF3Q9H094 633 aa11.45□□□□□ -0.58
PSEN1-204ENST00000394164 CWC15Q9P013 229 aaKnown RBP11.45□□□□□ -0.58
PSEN1-204ENST00000394164 IFNKQ9P0W0 207 aa11.45□□□□□ -0.58
PSEN1-204ENST00000394164 PDE8AO60658 829 aa11.45□□□□□ -0.58
PSEN1-204ENST00000394164 MBD4O95243 580 aa11.45□□□□□ -0.58
PSEN1-204ENST00000394164 STX1AQ16623 288 aa11.45□□□□□ -0.58
PSEN1-204ENST00000394164 SLC4A8Q2Y0W8 1093 aa11.45□□□□□ -0.58
PSEN1-204ENST00000394164 FAM182BQ5T319 152 aa11.45□□□□□ -0.58
PSEN1-204ENST00000394164 NBPF11Q86T75 865 aa11.45□□□□□ -0.58
PSEN1-204ENST00000394164 XPO4Q9C0E2 1151 aaKnown RBP11.45□□□□□ -0.58
PSEN1-204ENST00000394164 HPS5Q9UPZ3 1129 aa11.45□□□□□ -0.58
PSEN1-204ENST00000394164 NIP7Q9Y221 180 aaKnown RBP eCLIP11.45□□□□□ -0.58
PSEN1-204ENST00000394164 KIF28PB7ZC32 967 aa11.44□□□□□ -0.58
PSEN1-204ENST00000394164 KINO60870 393 aaKnown RBP11.44□□□□□ -0.58
PSEN1-204ENST00000394164 ATP2B1P20020 1258 aa11.44□□□□□ -0.58
PSEN1-204ENST00000394164 SFPQP23246 707 aaKnown RBP eCLIP11.44□□□□□ -0.58
PSEN1-204ENST00000394164 ADD2P35612 726 aa11.44□□□□□ -0.58
PSEN1-204ENST00000394164 TRIM28Q13263 835 aaKnown RBP11.44□□□□□ -0.58
PSEN1-204ENST00000394164 RASGRF1Q13972 1273 aa11.44□□□□□ -0.58
PSEN1-204ENST00000394164 LRRFIP1Q32MZ4 808 aaKnown RBP11.44□□□□□ -0.58
PSEN1-204ENST00000394164 CCDC93Q567U6 631 aa11.44□□□□□ -0.58
PSEN1-204ENST00000394164 MUM1L1Q5H9M0 696 aa11.44□□□□□ -0.58
PSEN1-204ENST00000394164 PACS2Q86VP3 889 aa11.44□□□□□ -0.58
PSEN1-204ENST00000394164 REXO1L1PQ8IX06 675 aa11.44□□□□□ -0.58
PSEN1-204ENST00000394164 ADAM21Q9UKJ8 722 aa11.44□□□□□ -0.58
PSEN1-204ENST00000394164 PCDHA7Q9UN72 937 aa11.44□□□□□ -0.58
PSEN1-204ENST00000394164 JAG2Q9Y219 1238 aa11.44□□□□□ -0.58
PSEN1-204ENST00000394164 PARP4Q9UKK3 1724 aaKnown RBP11.44□□□□□ -0.58
PSEN1-204ENST00000394164 RIC1Q4ADV7 1423 aa11.44□□□□□ -0.58
PSEN1-204ENST00000394164 LMTK3Q96Q04 1460 aa11.44□□□□□ -0.58
PSEN1-204ENST00000394164 ZFYP08048 801 aaPredicted RBP11.44□□□□□ -0.58
PSEN1-204ENST00000394164 CRKLP46109 303 aaKnown RBP11.44□□□□□ -0.58
PSEN1-204ENST00000394164 FAM193AP78312 1265 aa11.44□□□□□ -0.58
PSEN1-204ENST00000394164 MB21D2Q8IYB1 491 aaPredicted RBP11.44□□□□□ -0.58
PSEN1-204ENST00000394164 ZNF274Q96GC6 653 aaPredicted RBP11.44□□□□□ -0.58
PSEN1-204ENST00000394164 AK7Q96M32 723 aa11.44□□□□□ -0.58
PSEN1-204ENST00000394164 LLPHQ9BRT6 129 aaKnown RBP11.44□□□□□ -0.58
PSEN1-204ENST00000394164 VPS18Q9P253 973 aa11.44□□□□□ -0.58
PSEN1-204ENST00000394164 TNS2Q63HR2 1409 aa11.44□□□□□ -0.58
PSEN1-204ENST00000394164 RFX7Q2KHR2 1363 aa11.44□□□□□ -0.58
PSEN1-204ENST00000394164 LAMB4A4D0S4 1761 aa11.44□□□□□ -0.58
PSEN1-204ENST00000394164 H3BQF6 201 aa11.44□□□□□ -0.58
PSEN1-204ENST00000394164 FANCGO15287 622 aa11.44□□□□□ -0.58
PSEN1-204ENST00000394164 MCM6Q14566 821 aa11.44□□□□□ -0.58
PSEN1-204ENST00000394164 DDB1Q16531 1140 aa11.44□□□□□ -0.58
PSEN1-204ENST00000394164 DNAJC5Q9H3Z4 198 aa11.44□□□□□ -0.58
PSEN1-204ENST00000394164 LAMA4Q16363 1823 aa11.43□□□□□ -0.58
PSEN1-204ENST00000394164 NEDD4P46934 1319 aa11.43□□□□□ -0.58
PSEN1-204ENST00000394164 MYCNP04198 464 aaPredicted RBP11.43□□□□□ -0.58
PSEN1-204ENST00000394164 NAA16Q6N069 864 aaPredicted RBP11.43□□□□□ -0.58
PSEN1-204ENST00000394164 SARM1Q6SZW1 724 aa11.43□□□□□ -0.58
PSEN1-204ENST00000394164 RBM43Q6ZSC3 357 aaKnown RBP11.43□□□□□ -0.58
PSEN1-204ENST00000394164 SPATA5Q8NB90 893 aa11.43□□□□□ -0.58
PSEN1-204ENST00000394164 NUP188Q5SRE5 1749 aa11.43□□□□□ -0.58
PSEN1-204ENST00000394164 TOGARAM1Q9Y4F4 1720 aa11.43□□□□□ -0.58
PSEN1-204ENST00000394164 KIF2AO00139 706 aaPredicted RBP11.43□□□□□ -0.58
PSEN1-204ENST00000394164 PHACTR2O75167 634 aa11.43□□□□□ -0.58
PSEN1-204ENST00000394164 CDC27P30260 824 aa11.43□□□□□ -0.58
PSEN1-204ENST00000394164 NDUFA8P51970 172 aa11.43□□□□□ -0.58
PSEN1-204ENST00000394164 TTC31Q49AM3 519 aaPredicted RBP11.43□□□□□ -0.58
PSEN1-204ENST00000394164 CC2D1AQ6P1N0 951 aaPredicted RBP11.43□□□□□ -0.58
PSEN1-204ENST00000394164 FBXO18Q8NFZ0 1043 aa11.43□□□□□ -0.58
PSEN1-204ENST00000394164 ZNF396Q96N95 335 aaPredicted RBP11.43□□□□□ -0.58
PSEN1-204ENST00000394164 JRKLQ9Y4A0 524 aa11.43□□□□□ -0.58
PSEN1-204ENST00000394164 MINDY4BA8MYZ0 360 aa11.42□□□□□ -0.58
PSEN1-204ENST00000394164 METAP2P50579 478 aaKnown RBP eCLIP11.42□□□□□ -0.58
PSEN1-204ENST00000394164 ITPK1Q13572 414 aa11.42□□□□□ -0.58
PSEN1-204ENST00000394164 SPECC1Q5M775 1068 aa11.42□□□□□ -0.58
PSEN1-204ENST00000394164 SYNE3Q6ZMZ3 975 aa11.42□□□□□ -0.58
PSEN1-204ENST00000394164 GOLGA6L1Q8N7Z2 621 aa11.42□□□□□ -0.58
PSEN1-204ENST00000394164 VGLL2Q8N8G2 317 aa11.42□□□□□ -0.58
PSEN1-204ENST00000394164 NAPBQ9H115 298 aa11.42□□□□□ -0.58
PSEN1-204ENST00000394164 LRP2BPQ9P2M1 347 aa11.42□□□□□ -0.58
PSEN1-204ENST00000394164 hCG_1642624A0A1W2PR95 340 aa11.42□□□□□ -0.58
PSEN1-204ENST00000394164 TADA3O75528 432 aa11.42□□□□□ -0.58
PSEN1-204ENST00000394164 TDO2P48775 406 aa11.42□□□□□ -0.58
PSEN1-204ENST00000394164 PUM3Q15397 648 aaKnown RBP11.42□□□□□ -0.58
PSEN1-204ENST00000394164 TMEM67Q5HYA8 995 aa11.42□□□□□ -0.58
PSEN1-204ENST00000394164 WWC2Q6AWC2 1192 aa11.42□□□□□ -0.58
PSEN1-204ENST00000394164 GOLGA5Q8TBA6 731 aa11.42□□□□□ -0.58
PSEN1-204ENST00000394164 UTP14AQ9BVJ6 771 aaKnown RBP11.42□□□□□ -0.58
PSEN1-204ENST00000394164 AGXT2Q9BYV1 514 aa11.42□□□□□ -0.58
PSEN1-204ENST00000394164 RCOR1Q9UKL0 485 aa11.42□□□□□ -0.58
PSEN1-204ENST00000394164 BCL9O00512 1426 aa11.42□□□□□ -0.58
PSEN1-204ENST00000394164 GYG1P46976 350 aa11.41□□□□□ -0.58
PSEN1-204ENST00000394164 ETF1P62495 437 aaKnown RBP11.41□□□□□ -0.58
PSEN1-204ENST00000394164 HSP90AA4PQ58FG1 418 aa11.41□□□□□ -0.58
PSEN1-204ENST00000394164 LEKR1Q6ZMV7 388 aa11.41□□□□□ -0.58
PSEN1-204ENST00000394164 PTF1AQ7RTS3 328 aa11.41□□□□□ -0.58
PSEN1-204ENST00000394164 CEP57L1Q8IYX8 460 aa11.41□□□□□ -0.58
PSEN1-204ENST00000394164 NUP133Q8WUM0 1156 aa11.41□□□□□ -0.58
PSEN1-204ENST00000394164 SDR42E1Q8WUS8 393 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms