RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 MIGA1Q8NAN2 632 aa22.99■■□□□ 1.27
PDLIM7-204ENST00000393546 DDX4Q9NQI0 724 aaKnown RBP22.99■■□□□ 1.27
PDLIM7-204ENST00000393546 FZD1Q9UP38 647 aa22.99■■□□□ 1.27
PDLIM7-204ENST00000393546 ZNF532Q9HCE3 1301 aa22.99■■□□□ 1.27
PDLIM7-204ENST00000393546 SSC5DA1L4H1 1573 aa22.98■■□□□ 1.27
PDLIM7-204ENST00000393546 UNCXA6NJT0 531 aa22.98■■□□□ 1.27
PDLIM7-204ENST00000393546 NEFLP07196 543 aa22.98■■□□□ 1.27
PDLIM7-204ENST00000393546 ADD2P35612 726 aa22.98■■□□□ 1.27
PDLIM7-204ENST00000393546 DCAF15Q66K64 600 aa22.98■■□□□ 1.27
PDLIM7-204ENST00000393546 KBTBD3Q8NAB2 608 aa22.98■■□□□ 1.27
PDLIM7-204ENST00000393546 RFX7Q2KHR2 1363 aa22.98■■□□□ 1.27
PDLIM7-204ENST00000393546 MAGEB6P1A0A0J9YX57 407 aa22.97■■□□□ 1.27
PDLIM7-204ENST00000393546 TCRBV5S4A2TA0A5A2 114 aa22.97■■□□□ 1.27
PDLIM7-204ENST00000393546 JMYQ8N9B5 988 aa22.97■■□□□ 1.27
PDLIM7-204ENST00000393546 TGFBRAP1Q8WUH2 860 aa22.97■■□□□ 1.27
PDLIM7-204ENST00000393546 UBE3CQ15386 1083 aa22.96■■□□□ 1.27
PDLIM7-204ENST00000393546 LRRFIP1Q32MZ4 808 aaKnown RBP22.96■■□□□ 1.27
PDLIM7-204ENST00000393546 SLC10A4Q96EP9 437 aa22.96■■□□□ 1.27
PDLIM7-204ENST00000393546 OSBPL5Q9H0X9 879 aaPredicted RBP22.96■■□□□ 1.27
PDLIM7-204ENST00000393546 MAP2K2P36507 400 aa22.95■■□□□ 1.26
PDLIM7-204ENST00000393546 MAP3K9P80192 1104 aa22.95■■□□□ 1.26
PDLIM7-204ENST00000393546 MIGA2Q7L4E1 593 aa22.95■■□□□ 1.26
PDLIM7-204ENST00000393546 SH3BP5LQ7L8J4 393 aa22.95■■□□□ 1.26
PDLIM7-204ENST00000393546 ANKRD13AQ8IZ07 590 aa22.95■■□□□ 1.26
PDLIM7-204ENST00000393546 CSRNP1Q96S65 589 aa22.95■■□□□ 1.26
PDLIM7-204ENST00000393546 ZNF341Q9BYN7 854 aa22.95■■□□□ 1.26
PDLIM7-204ENST00000393546 DDTLA6NHG4 134 aaPredicted RBP22.94■■□□□ 1.26
PDLIM7-204ENST00000393546 NOGQ13253 232 aa22.94■■□□□ 1.26
PDLIM7-204ENST00000393546 MAPKAPK5Q8IW41 473 aa22.94■■□□□ 1.26
PDLIM7-204ENST00000393546 RIOK1Q9BRS2 568 aaKnown RBP22.94■■□□□ 1.26
PDLIM7-204ENST00000393546 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.94■■□□□ 1.26
PDLIM7-204ENST00000393546 FAM155AB1AL88 458 aaPredicted RBP22.93■■□□□ 1.26
PDLIM7-204ENST00000393546 AOC2O75106 756 aa22.93■■□□□ 1.26
PDLIM7-204ENST00000393546 ZFYP08048 801 aaPredicted RBP22.93■■□□□ 1.26
PDLIM7-204ENST00000393546 SLC10A3P09131 477 aa22.93■■□□□ 1.26
PDLIM7-204ENST00000393546 USP5P45974 858 aa22.93■■□□□ 1.26
PDLIM7-204ENST00000393546 RASAL3Q86YV0 1011 aa22.93■■□□□ 1.26
PDLIM7-204ENST00000393546 PLEKHM2Q8IWE5 1019 aa22.93■■□□□ 1.26
PDLIM7-204ENST00000393546 RNF113AO15541 343 aaKnown RBP22.92■■□□□ 1.26
PDLIM7-204ENST00000393546 SLFNL1Q499Z3 407 aa22.92■■□□□ 1.26
PDLIM7-204ENST00000393546 FSD1Q9BTV5 496 aa22.92■■□□□ 1.26
PDLIM7-204ENST00000393546 CRNKL1Q9BZJ0 848 aaKnown RBP22.92■■□□□ 1.26
PDLIM7-204ENST00000393546 DHX36Q9H2U1 1008 aaKnown RBP22.92■■□□□ 1.26
PDLIM7-204ENST00000393546 OSBPL3Q9H4L5 887 aa22.92■■□□□ 1.26
PDLIM7-204ENST00000393546 MYH7P12883 1935 aa22.92■■□□□ 1.26
PDLIM7-204ENST00000393546 ATRNL1Q5VV63 1379 aa22.91■■□□□ 1.26
PDLIM7-204ENST00000393546 FLT1P17948 1338 aa22.91■■□□□ 1.26
PDLIM7-204ENST00000393546 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.91■■□□□ 1.26
PDLIM7-204ENST00000393546 EVI5LQ96CN4 794 aa22.91■■□□□ 1.26
PDLIM7-204ENST00000393546 CLMNQ96JQ2 1002 aa22.91■■□□□ 1.26
PDLIM7-204ENST00000393546 WRNIP1Q96S55 665 aa22.91■■□□□ 1.26
PDLIM7-204ENST00000393546 CSADQ9Y600 493 aa22.91■■□□□ 1.26
PDLIM7-204ENST00000393546 COL2A1P02458 1487 aaPredicted RBP22.91■■□□□ 1.26
PDLIM7-204ENST00000393546 CHGBP05060 677 aa22.9■■□□□ 1.26
PDLIM7-204ENST00000393546 MAP3K10Q02779 954 aa22.9■■□□□ 1.26
PDLIM7-204ENST00000393546 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.9■■□□□ 1.26
PDLIM7-204ENST00000393546 AIDAQ96BJ3 306 aa22.9■■□□□ 1.26
PDLIM7-204ENST00000393546 ARMT1Q9H993 441 aa22.9■■□□□ 1.26
PDLIM7-204ENST00000393546 MBD4O95243 580 aa22.89■■□□□ 1.25
PDLIM7-204ENST00000393546 MAP2K1Q02750 393 aaPredicted RBP22.89■■□□□ 1.25
PDLIM7-204ENST00000393546 LCORLQ8N3X6 602 aa22.89■■□□□ 1.25
PDLIM7-204ENST00000393546 APPBP2Q92624 585 aa22.89■■□□□ 1.25
PDLIM7-204ENST00000393546 PI4KBQ9UBF8 816 aa22.89■■□□□ 1.25
PDLIM7-204ENST00000393546 ZNF112Q9UJU3 913 aa22.89■■□□□ 1.25
PDLIM7-204ENST00000393546 CDK5RAP2Q96SN8 1893 aa22.88■■□□□ 1.25
PDLIM7-204ENST00000393546 TRIM6-TRIM34B2RNG4 842 aa22.88■■□□□ 1.25
PDLIM7-204ENST00000393546 TBC1D12O60347 775 aa22.88■■□□□ 1.25
PDLIM7-204ENST00000393546 KIF23Q02241 960 aaPredicted RBP22.88■■□□□ 1.25
PDLIM7-204ENST00000393546 PUS7LQ9H0K6 701 aaKnown RBP22.88■■□□□ 1.25
PDLIM7-204ENST00000393546 ELP3Q9H9T3 547 aa22.88■■□□□ 1.25
PDLIM7-204ENST00000393546 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.88■■□□□ 1.252e-6■■■■■ 52.9
PDLIM7-204ENST00000393546 SAP30BPQ9UHR5 308 aaKnown RBP22.88■■□□□ 1.25
PDLIM7-204ENST00000393546 PALD1Q9ULE6 856 aa22.88■■□□□ 1.25
PDLIM7-204ENST00000393546 FOCADQ5VW36 1801 aa22.87■■□□□ 1.25
PDLIM7-204ENST00000393546 HLA-DOAP06340 250 aa22.87■■□□□ 1.25
PDLIM7-204ENST00000393546 VGLL4Q14135 290 aa22.87■■□□□ 1.25
PDLIM7-204ENST00000393546 SPRYD7Q5W111 196 aa22.87■■□□□ 1.25
PDLIM7-204ENST00000393546 CENPQQ7L2Z9 268 aaPredicted RBP22.87■■□□□ 1.25
PDLIM7-204ENST00000393546 FOXP4Q8IVH2 680 aaPredicted RBP22.87■■□□□ 1.25
PDLIM7-204ENST00000393546 REM2Q8IYK8 340 aaPredicted RBP22.87■■□□□ 1.25
PDLIM7-204ENST00000393546 ZKSCAN4Q969J2 545 aaPredicted RBP22.87■■□□□ 1.25
PDLIM7-204ENST00000393546 ZIC5Q96T25 663 aa22.87■■□□□ 1.25
PDLIM7-204ENST00000393546 PDE4AP27815 886 aa22.86■■□□□ 1.25
PDLIM7-204ENST00000393546 INPP5BP32019 993 aa22.86■■□□□ 1.25
PDLIM7-204ENST00000393546 OSBP2Q969R2 916 aa22.86■■□□□ 1.25
PDLIM7-204ENST00000393546 RILPL2Q969X0 211 aa22.86■■□□□ 1.25
PDLIM7-204ENST00000393546 WNK4Q96J92 1243 aa22.86■■□□□ 1.25
PDLIM7-204ENST00000393546 HERC5Q9UII4 1024 aaKnown RBP22.86■■□□□ 1.25
PDLIM7-204ENST00000393546 PHF20L1A8MW92 1017 aa22.85■■□□□ 1.25
PDLIM7-204ENST00000393546 ZBTB48P10074 688 aaPredicted RBP22.85■■□□□ 1.25
PDLIM7-204ENST00000393546 MKRN3Q13064 507 aaKnown RBP22.85■■□□□ 1.25
PDLIM7-204ENST00000393546 TTC6Q86TZ1 520 aa22.85■■□□□ 1.25
PDLIM7-204ENST00000393546 TICAM2Q86XR7 235 aa22.85■■□□□ 1.25
PDLIM7-204ENST00000393546 SDR42E1Q8WUS8 393 aa22.85■■□□□ 1.25
PDLIM7-204ENST00000393546 CCDC136Q96JN2 1154 aa22.85■■□□□ 1.25
PDLIM7-204ENST00000393546 BEGAINQ9BUH8 593 aa22.85■■□□□ 1.25
PDLIM7-204ENST00000393546 TRIM34Q9BYJ4 488 aa22.85■■□□□ 1.25
PDLIM7-204ENST00000393546 ATP8A2Q9NTI2 1148 aa22.85■■□□□ 1.25
PDLIM7-204ENST00000393546 WBP1LQ9NX94 342 aa22.85■■□□□ 1.25
PDLIM7-204ENST00000393546 PRKAB2O43741 272 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms