RNA–Protein interactions for RNA: ENST00000393346.7

PICALM-202, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PICALM, Length 2,340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-202ENST00000393346 LINC00301Q8NCQ3 95 aa27.34■■□□□ 1.97
PICALM-202ENST00000393346 TPD52L1Q16890 204 aaPredicted RBP27.34■■□□□ 1.97
PICALM-202ENST00000393346 MB21D2Q8IYB1 491 aaPredicted RBP27.34■■□□□ 1.97
PICALM-202ENST00000393346 C8orf76Q96K31 380 aa27.34■■□□□ 1.97
PICALM-202ENST00000393346 POLRMTO00411 1230 aaKnown RBP27.33■■□□□ 1.97
PICALM-202ENST00000393346 PRC1O43663 620 aa27.33■■□□□ 1.97
PICALM-202ENST00000393346 HAND2P61296 217 aa27.33■■□□□ 1.97
PICALM-202ENST00000393346 EN1Q05925 392 aaPredicted RBP27.33■■□□□ 1.97
PICALM-202ENST00000393346 PPP4R3BQ5MIZ7 849 aa27.33■■□□□ 1.97
PICALM-202ENST00000393346 RASGRF1Q13972 1273 aa27.33■■□□□ 1.97
PICALM-202ENST00000393346 SYCP1Q15431 976 aa27.33■■□□□ 1.97
PICALM-202ENST00000393346 APPBP2Q92624 585 aa27.33■■□□□ 1.97
PICALM-202ENST00000393346 POLR3EQ9NVU0 708 aa27.33■■□□□ 1.97
PICALM-202ENST00000393346 RGPD3A6NKT7 1758 aaPredicted RBP27.32■■□□□ 1.96
PICALM-202ENST00000393346 RGPD4Q7Z3J3 1758 aa27.32■■□□□ 1.96
PICALM-202ENST00000393346 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.32■■□□□ 1.96
PICALM-202ENST00000393346 YEATS4O95619 227 aa27.32■■□□□ 1.96
PICALM-202ENST00000393346 SPATA5Q8NB90 893 aa27.32■■□□□ 1.96
PICALM-202ENST00000393346 FBXO18Q8NFZ0 1043 aa27.32■■□□□ 1.96
PICALM-202ENST00000393346 KCNG4Q8TDN1 519 aa27.32■■□□□ 1.96
PICALM-202ENST00000393346 SDF4Q9BRK5 362 aa27.32■■□□□ 1.96
PICALM-202ENST00000393346 HPS5Q9UPZ3 1129 aa27.32■■□□□ 1.96
PICALM-202ENST00000393346 KLF18A0A0U1RQI7 1052 aa27.32■■□□□ 1.96
PICALM-202ENST00000393346 UBE4AQ14139 1066 aa27.32■■□□□ 1.96
PICALM-202ENST00000393346 EZH2Q15910 746 aaKnown RBP27.32■■□□□ 1.96
PICALM-202ENST00000393346 NCOA7Q8NI08 942 aa27.32■■□□□ 1.96
PICALM-202ENST00000393346 A0A087WWV3 80 aa27.31■■□□□ 1.96
PICALM-202ENST00000393346 A0A1B0GVL5 298 aa27.31■■□□□ 1.96
PICALM-202ENST00000393346 STK38Q15208 465 aa27.31■■□□□ 1.96
PICALM-202ENST00000393346 TTF1Q15361 905 aaPredicted RBP27.31■■□□□ 1.96
PICALM-202ENST00000393346 OTUD7BQ6GQQ9 843 aa27.31■■□□□ 1.96
PICALM-202ENST00000393346 BRAPQ7Z569 592 aa27.31■■□□□ 1.96
PICALM-202ENST00000393346 CLIC4Q9Y696 253 aa27.31■■□□□ 1.96
PICALM-202ENST00000393346 NDUFA8P51970 172 aa27.3■■□□□ 1.96
PICALM-202ENST00000393346 SF3A1Q15459 793 aaKnown RBP27.3■■□□□ 1.96
PICALM-202ENST00000393346 NLGN1Q8N2Q7 840 aa27.3■■□□□ 1.96
PICALM-202ENST00000393346 AOPEPQ8N6M6 819 aa27.3■■□□□ 1.96
PICALM-202ENST00000393346 RPGRQ92834 1020 aaKnown RBP27.3■■□□□ 1.96
PICALM-202ENST00000393346 ORC3Q9UBD5 711 aaPredicted RBP27.3■■□□□ 1.96
PICALM-202ENST00000393346 GOLGA8BA8MQT2 603 aa27.3■■□□□ 1.96
PICALM-202ENST00000393346 IDH1O75874 414 aaKnown RBP27.3■■□□□ 1.96
PICALM-202ENST00000393346 GYG1P46976 350 aa27.3■■□□□ 1.96
PICALM-202ENST00000393346 ARID5BQ14865 1188 aa27.3■■□□□ 1.96
PICALM-202ENST00000393346 FLAD1Q8NFF5 587 aa27.3■■□□□ 1.96
PICALM-202ENST00000393346 WDR19Q8NEZ3 1342 aa27.3■■□□□ 1.96
PICALM-202ENST00000393346 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.29■■□□□ 1.969e-8■■□□□ 12.1
PICALM-202ENST00000393346 PUS7LQ9H0K6 701 aaKnown RBP27.29■■□□□ 1.96
PICALM-202ENST00000393346 PIH1D3Q9NQM4 214 aaKnown RBP27.29■■□□□ 1.96
PICALM-202ENST00000393346 IQSEC3Q9UPP2 1182 aaPredicted RBP27.29■■□□□ 1.96
PICALM-202ENST00000393346 ANTXR2P58335 489 aa27.29■■□□□ 1.96
PICALM-202ENST00000393346 GRAPQ13588 217 aa27.29■■□□□ 1.96
PICALM-202ENST00000393346 MYSM1Q5VVJ2 828 aa27.29■■□□□ 1.96
PICALM-202ENST00000393346 GRAPLQ8TC17 118 aaPredicted RBP27.29■■□□□ 1.96
PICALM-202ENST00000393346 ERCC4Q92889 916 aaPredicted RBP27.29■■□□□ 1.96
PICALM-202ENST00000393346 KIAA1468Q9P260 1216 aa27.29■■□□□ 1.96
PICALM-202ENST00000393346 PNPLA7Q6ZV29 1317 aa27.29■■□□□ 1.96
PICALM-202ENST00000393346 POLR3DP05423 398 aaPredicted RBP27.28■■□□□ 1.96
PICALM-202ENST00000393346 SKILP12757 684 aa27.28■■□□□ 1.96
PICALM-202ENST00000393346 SLC9C2Q5TAH2 1124 aa27.28■■□□□ 1.96
PICALM-202ENST00000393346 RALYLQ86SE5 291 aaKnown RBP27.28■■□□□ 1.96
PICALM-202ENST00000393346 ZNF213O14771 459 aa27.28■■□□□ 1.96
PICALM-202ENST00000393346 SPTLC2O15270 562 aa27.28■■□□□ 1.96
PICALM-202ENST00000393346 VPS37DQ86XT2 251 aa27.28■■□□□ 1.96
PICALM-202ENST00000393346 RGS22Q8NE09 1264 aa27.28■■□□□ 1.96
PICALM-202ENST00000393346 BPIFA3Q9BQP9 254 aa27.28■■□□□ 1.96
PICALM-202ENST00000393346 CCDC69A6NI79 296 aa27.27■■□□□ 1.96
PICALM-202ENST00000393346 CPLX1O14810 134 aa27.27■■□□□ 1.96
PICALM-202ENST00000393346 CEP135Q66GS9 1140 aa27.27■■□□□ 1.96
PICALM-202ENST00000393346 CCDC112Q8NEF3 446 aa27.27■■□□□ 1.96
PICALM-202ENST00000393346 PKNOX2Q96KN3 472 aa27.27■■□□□ 1.96
PICALM-202ENST00000393346 ANKRD2Q9GZV1 360 aa27.27■■□□□ 1.96
PICALM-202ENST00000393346 NCBP1Q09161 790 aaKnown RBP27.27■■□□□ 1.96
PICALM-202ENST00000393346 CRY2Q49AN0 593 aa27.27■■□□□ 1.96
PICALM-202ENST00000393346 CAVIN4Q5BKX8 364 aa27.27■■□□□ 1.96
PICALM-202ENST00000393346 FILIP1Q7Z7B0 1213 aa27.27■■□□□ 1.96
PICALM-202ENST00000393346 CAMKK2Q96RR4 588 aa27.27■■□□□ 1.96
PICALM-202ENST00000393346 GPAA1O43292 621 aa27.26■■□□□ 1.95
PICALM-202ENST00000393346 CCZ1BP86790 482 aa27.26■■□□□ 1.95
PICALM-202ENST00000393346 CCZ1P86791 482 aaPredicted RBP27.26■■□□□ 1.95
PICALM-202ENST00000393346 SLC51AQ86UW1 340 aa27.26■■□□□ 1.95
PICALM-202ENST00000393346 SYNE3Q6ZMZ3 975 aa27.25■■□□□ 1.95
PICALM-202ENST00000393346 NEDD4P46934 1319 aa27.25■■□□□ 1.95
PICALM-202ENST00000393346 GSDMDP57764 484 aa27.25■■□□□ 1.95
PICALM-202ENST00000393346 ZRSR1Q15695 479 aaKnown RBP27.25■■□□□ 1.95
PICALM-202ENST00000393346 MSL1Q68DK7 614 aa27.25■■□□□ 1.95
PICALM-202ENST00000393346 KLRK1P26718 216 aa27.24■■□□□ 1.95
PICALM-202ENST00000393346 KCND1Q9NSA2 647 aa27.24■■□□□ 1.95
PICALM-202ENST00000393346 ANKIB1Q9P2G1 1089 aa27.24■■□□□ 1.95
PICALM-202ENST00000393346 ADD2P35612 726 aa27.24■■□□□ 1.95
PICALM-202ENST00000393346 NYAP1Q6ZVC0 841 aa27.24■■□□□ 1.95
PICALM-202ENST00000393346 FAM84BQ96KN1 310 aaPredicted RBP27.24■■□□□ 1.95
PICALM-202ENST00000393346 IMPACTQ9P2X3 320 aa27.24■■□□□ 1.95
PICALM-202ENST00000393346 DOCK2Q92608 1830 aa27.24■■□□□ 1.95
PICALM-202ENST00000393346 USP27XA6NNY8 438 aa27.23■■□□□ 1.95
PICALM-202ENST00000393346 MMP10P09238 476 aa27.23■■□□□ 1.95
PICALM-202ENST00000393346 KIF23Q02241 960 aaPredicted RBP27.23■■□□□ 1.95
PICALM-202ENST00000393346 ANO1Q5XXA6 986 aa27.23■■□□□ 1.95
PICALM-202ENST00000393346 FBXW7Q969H0 707 aa27.23■■□□□ 1.95
PICALM-202ENST00000393346 OSBPL5Q9H0X9 879 aaPredicted RBP27.23■■□□□ 1.95
PICALM-202ENST00000393346 GNL3LQ9NVN8 582 aaKnown RBP27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms