RNA–Protein interactions for RNA: ENST00000393240.7

SYT1-202, Transcript of synaptotagmin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYT1, Length 3,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-202ENST00000393240 GPR75-ASB3A0A0A6YYF3 556 aa11.38□□□□□ -0.59
SYT1-202ENST00000393240 PTPDC1A2A3K4 754 aa11.38□□□□□ -0.59
SYT1-202ENST00000393240 GOLGA8BA8MQT2 603 aa11.38□□□□□ -0.59
SYT1-202ENST00000393240 USP17L12C9JPN9 530 aa11.38□□□□□ -0.59
SYT1-202ENST00000393240 USP17L21D6R901 530 aa11.38□□□□□ -0.59
SYT1-202ENST00000393240 RIMBP2O15034 1052 aa11.38□□□□□ -0.59
SYT1-202ENST00000393240 VPS37CA5D8V6 355 aaPredicted RBP11.37□□□□□ -0.59
SYT1-202ENST00000393240 IFIT3O14879 490 aaKnown RBP11.37□□□□□ -0.59
SYT1-202ENST00000393240 PRPF40AO75400 957 aaKnown RBP11.37□□□□□ -0.59
SYT1-202ENST00000393240 SLC3A2P08195 630 aaKnown RBP11.37□□□□□ -0.59
SYT1-202ENST00000393240 OLFM4Q6UX06 510 aa11.37□□□□□ -0.59
SYT1-202ENST00000393240 PODNQ7Z5L7 613 aa11.37□□□□□ -0.59
SYT1-202ENST00000393240 RGS22Q8NE09 1264 aa11.37□□□□□ -0.59
SYT1-202ENST00000393240 C7orf43Q8WVR3 580 aa11.37□□□□□ -0.59
SYT1-202ENST00000393240 NCOA5Q9HCD5 579 aaKnown RBP11.37□□□□□ -0.59
SYT1-202ENST00000393240 PLCG2P16885 1265 aa11.37□□□□□ -0.59
SYT1-202ENST00000393240 GTF2IP78347 998 aa11.37□□□□□ -0.59
SYT1-202ENST00000393240 DIXDC1Q155Q3 683 aa11.37□□□□□ -0.59
SYT1-202ENST00000393240 GRIPAP1Q4V328 841 aa11.37□□□□□ -0.59
SYT1-202ENST00000393240 APOA5Q6Q788 366 aa11.37□□□□□ -0.59
SYT1-202ENST00000393240 TMEM87AQ8NBN3 555 aa11.37□□□□□ -0.59
SYT1-202ENST00000393240 CCDC88AQ3V6T2 1871 aa11.37□□□□□ -0.59
SYT1-202ENST00000393240 ERICH2A1L162 156 aa11.37□□□□□ -0.59
SYT1-202ENST00000393240 CHRNA5P30532 468 aa11.37□□□□□ -0.59
SYT1-202ENST00000393240 RCAN1P53805 252 aa11.37□□□□□ -0.59
SYT1-202ENST00000393240 TOMM22Q9NS69 142 aa11.37□□□□□ -0.59
SYT1-202ENST00000393240 DDX49Q9Y6V7 483 aaKnown RBP11.37□□□□□ -0.59
SYT1-202ENST00000393240 GAKO14976 1311 aa11.36□□□□□ -0.59
SYT1-202ENST00000393240 ORC4O43929 436 aa11.36□□□□□ -0.59
SYT1-202ENST00000393240 DTNBO60941 627 aa11.36□□□□□ -0.59
SYT1-202ENST00000393240 RRP12Q5JTH9 1297 aaKnown RBP11.36□□□□□ -0.59
SYT1-202ENST00000393240 SH3RF3Q8TEJ3 882 aaPredicted RBP11.36□□□□□ -0.59
SYT1-202ENST00000393240 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.36□□□□□ -0.59
SYT1-202ENST00000393240 NID2Q14112 1375 aa11.36□□□□□ -0.59
SYT1-202ENST00000393240 CCDC69A6NI79 296 aa11.36□□□□□ -0.59
SYT1-202ENST00000393240 USP5P45974 858 aa11.36□□□□□ -0.59
SYT1-202ENST00000393240 METAP2P50579 478 aaKnown RBP eCLIP11.36□□□□□ -0.59
SYT1-202ENST00000393240 NFXL1Q6ZNB6 911 aa11.36□□□□□ -0.59
SYT1-202ENST00000393240 CDC37L1Q7L3B6 337 aa11.36□□□□□ -0.59
SYT1-202ENST00000393240 DDX11Q96FC9 970 aa11.36□□□□□ -0.59
SYT1-202ENST00000393240 PDGFDQ9GZP0 370 aaPredicted RBP11.36□□□□□ -0.59
SYT1-202ENST00000393240 ZSCAN16Q9H4T2 348 aaPredicted RBP11.36□□□□□ -0.59
SYT1-202ENST00000393240 C10orf71Q711Q0 1435 aa11.36□□□□□ -0.59
SYT1-202ENST00000393240 G3V3G9 751 aa11.35□□□□□ -0.59
SYT1-202ENST00000393240 CPLX1O14810 134 aa11.35□□□□□ -0.59
SYT1-202ENST00000393240 ZBTB43O43298 467 aa11.35□□□□□ -0.59
SYT1-202ENST00000393240 CDKL5O76039 1030 aa11.35□□□□□ -0.59
SYT1-202ENST00000393240 WTAPQ15007 396 aa11.35□□□□□ -0.59
SYT1-202ENST00000393240 DCAF8Q5TAQ9 597 aa11.35□□□□□ -0.59
SYT1-202ENST00000393240 C12orf60Q5U649 245 aa11.35□□□□□ -0.59
SYT1-202ENST00000393240 SYNE3Q6ZMZ3 975 aa11.35□□□□□ -0.59
SYT1-202ENST00000393240 SLC12A7Q9Y666 1083 aa11.35□□□□□ -0.59
SYT1-202ENST00000393240 CYP2D7A0A087X1C5 515 aa11.35□□□□□ -0.59
SYT1-202ENST00000393240 H3BQV1 296 aa11.35□□□□□ -0.59
SYT1-202ENST00000393240 FDPSP14324 419 aaKnown RBP11.35□□□□□ -0.59
SYT1-202ENST00000393240 BTDP43251 543 aa11.35□□□□□ -0.59
SYT1-202ENST00000393240 FKBP1AP62942 108 aaKnown RBP11.35□□□□□ -0.59
SYT1-202ENST00000393240 PDE4BQ07343 736 aa11.35□□□□□ -0.59
SYT1-202ENST00000393240 CSPP1Q1MSJ5 1256 aa11.35□□□□□ -0.59
SYT1-202ENST00000393240 IFFO2Q5TF58 517 aa11.35□□□□□ -0.59
SYT1-202ENST00000393240 CPLX2Q6PUV4 134 aaKnown RBP11.35□□□□□ -0.59
SYT1-202ENST00000393240 CHAMP1Q96JM3 812 aa11.35□□□□□ -0.59
SYT1-202ENST00000393240 UBAC1Q9BSL1 405 aa11.35□□□□□ -0.59
SYT1-202ENST00000393240 MCM9Q9NXL9 1143 aa11.35□□□□□ -0.59
SYT1-202ENST00000393240 MBD3O95983 291 aa11.34□□□□□ -0.59
SYT1-202ENST00000393240 DOK7Q18PE1 504 aa11.34□□□□□ -0.59
SYT1-202ENST00000393240 AMOTL1Q8IY63 956 aa11.34□□□□□ -0.59
SYT1-202ENST00000393240 SUPT20HQ8NEM7 779 aa11.34□□□□□ -0.59
SYT1-202ENST00000393240 SENP2Q9HC62 589 aa11.34□□□□□ -0.59
SYT1-202ENST00000393240 PPP2R5BQ15173 497 aa11.34□□□□□ -0.59
SYT1-202ENST00000393240 SEC23AQ15436 765 aa11.34□□□□□ -0.59
SYT1-202ENST00000393240 USP48Q86UV5 1035 aa11.34□□□□□ -0.59
SYT1-202ENST00000393240 ZSCAN10Q96SZ4 725 aaPredicted RBP11.34□□□□□ -0.59
SYT1-202ENST00000393240 IQCA1Q86XH1 822 aa11.34□□□□□ -0.59
SYT1-202ENST00000393240 MRIQ9BWK5 157 aa11.34□□□□□ -0.59
SYT1-202ENST00000393240 ROBO3Q96MS0 1386 aa11.33□□□□□ -0.59
SYT1-202ENST00000393240 SNED1Q8TER0 1413 aa11.33□□□□□ -0.6
SYT1-202ENST00000393240 SMIM22K7EJ46 135 aa11.33□□□□□ -0.6
SYT1-202ENST00000393240 USP17L8P0C7I0 530 aa11.33□□□□□ -0.6
SYT1-202ENST00000393240 ADD1P35611 737 aaKnown RBP11.33□□□□□ -0.6
SYT1-202ENST00000393240 RHBDL3P58872 404 aa11.33□□□□□ -0.6
SYT1-202ENST00000393240 FOXD4L6Q3SYB3 417 aaPredicted RBP11.33□□□□□ -0.6
SYT1-202ENST00000393240 FOXD4L3Q6VB84 417 aaPredicted RBP11.33□□□□□ -0.6
SYT1-202ENST00000393240 STK11IPQ8N1F8 1099 aa11.33□□□□□ -0.6
SYT1-202ENST00000393240 CERS5Q8N5B7 392 aa11.33□□□□□ -0.6
SYT1-202ENST00000393240 TGFBRAP1Q8WUH2 860 aa11.33□□□□□ -0.6
SYT1-202ENST00000393240 CNPY2Q9Y2B0 182 aa11.33□□□□□ -0.6
SYT1-202ENST00000393240 CCDC196A0A1B0GTZ2 297 aa11.33□□□□□ -0.6
SYT1-202ENST00000393240 GOLGA8AA7E2F4 631 aa11.33□□□□□ -0.6
SYT1-202ENST00000393240 RANBP6O60518 1105 aaKnown RBP11.33□□□□□ -0.6
SYT1-202ENST00000393240 DNM1Q05193 864 aaKnown RBP11.33□□□□□ -0.6
SYT1-202ENST00000393240 RESTQ13127 1097 aa11.33□□□□□ -0.6
SYT1-202ENST00000393240 NTRK3Q16288 839 aa11.33□□□□□ -0.6
SYT1-202ENST00000393240 STRIP1Q5VSL9 837 aa11.33□□□□□ -0.6
SYT1-202ENST00000393240 TTLL6Q8N841 843 aa11.33□□□□□ -0.6
SYT1-202ENST00000393240 ZKSCAN3Q9BRR0 538 aa11.33□□□□□ -0.6
SYT1-202ENST00000393240 FAM217BQ9NTX9 383 aaPredicted RBP11.33□□□□□ -0.6
SYT1-202ENST00000393240 TNKSO95271 1327 aa11.33□□□□□ -0.6
SYT1-202ENST00000393240 NCLP19338 710 aaKnown RBP11.32□□□□□ -0.6
SYT1-202ENST00000393240 CDC27P30260 824 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms