RNA–Protein interactions for RNA: ENST00000391014.1

RNU6-1228P-201, Transcript of RNA, U6 small nuclear 1228, pseudogene, humanhuman

BASIC

Gene RNU6-1228P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1228P-201ENST00000391014 PRPF40BQ6NWY9 871 aaKnown RBP3.5□□□□□ -1.85
RNU6-1228P-201ENST00000391014 PI16Q6UXB8 463 aa3.5□□□□□ -1.85
RNU6-1228P-201ENST00000391014 EPS8L3Q8TE67 593 aaKnown RBP3.5□□□□□ -1.85
RNU6-1228P-201ENST00000391014 ISL2Q96A47 359 aa3.5□□□□□ -1.85
RNU6-1228P-201ENST00000391014 HRASLS5Q96KN8 279 aa3.5□□□□□ -1.85
RNU6-1228P-201ENST00000391014 NIF3L1Q9GZT8 377 aa3.5□□□□□ -1.85
RNU6-1228P-201ENST00000391014 ATXN3LQ9H3M9 355 aa3.5□□□□□ -1.85
RNU6-1228P-201ENST00000391014 PIDD1Q9HB75 910 aa3.5□□□□□ -1.85
RNU6-1228P-201ENST00000391014 PCOLCE2Q9UKZ9 415 aa3.5□□□□□ -1.85
RNU6-1228P-201ENST00000391014 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.49□□□□□ -1.85
RNU6-1228P-201ENST00000391014 H3BRB1 525 aa3.49□□□□□ -1.85
RNU6-1228P-201ENST00000391014 EIF1AYO14602 144 aaKnown RBP3.49□□□□□ -1.85
RNU6-1228P-201ENST00000391014 PPP1R15AO75807 674 aaPredicted RBP3.49□□□□□ -1.85
RNU6-1228P-201ENST00000391014 ITIH2P19823 946 aa3.49□□□□□ -1.85
RNU6-1228P-201ENST00000391014 ZC3H12AQ5D1E8 599 aaKnown RBP3.49□□□□□ -1.85
RNU6-1228P-201ENST00000391014 FYB2Q5VWT5 728 aa3.49□□□□□ -1.85
RNU6-1228P-201ENST00000391014 UBE3DQ7Z6J8 389 aa3.49□□□□□ -1.85
RNU6-1228P-201ENST00000391014 TOP6BLQ8N6T0 577 aa3.49□□□□□ -1.85
RNU6-1228P-201ENST00000391014 KCNB2Q92953 911 aa3.49□□□□□ -1.85
RNU6-1228P-201ENST00000391014 KRTAP4-11Q9BYQ6 195 aa3.49□□□□□ -1.85
RNU6-1228P-201ENST00000391014 TNKS2Q9H2K2 1166 aa3.49□□□□□ -1.85
RNU6-1228P-201ENST00000391014 TUT1Q9H6E5 874 aaKnown RBP3.49□□□□□ -1.85
RNU6-1228P-201ENST00000391014 MKNK2Q9HBH9 465 aa3.49□□□□□ -1.85
RNU6-1228P-201ENST00000391014 EGFL7Q9UHF1 273 aa3.49□□□□□ -1.85
RNU6-1228P-201ENST00000391014 MTMR7Q9Y216 660 aa3.49□□□□□ -1.85
RNU6-1228P-201ENST00000391014 TMEM265A0A087WTH1 108 aa3.48□□□□□ -1.85
RNU6-1228P-201ENST00000391014 GADD45BO75293 160 aaPredicted RBP3.48□□□□□ -1.85
RNU6-1228P-201ENST00000391014 NTF4P34130 210 aa3.48□□□□□ -1.85
RNU6-1228P-201ENST00000391014 NKPD1Q17RQ9 610 aa3.48□□□□□ -1.85
RNU6-1228P-201ENST00000391014 SLC23A3Q6PIS1 610 aa3.48□□□□□ -1.85
RNU6-1228P-201ENST00000391014 KSR1Q8IVT5 923 aa3.48□□□□□ -1.85
RNU6-1228P-201ENST00000391014 LIN37Q96GY3 246 aaPredicted RBP3.48□□□□□ -1.85
RNU6-1228P-201ENST00000391014 KRT82Q9NSB4 513 aa3.48□□□□□ -1.85
RNU6-1228P-201ENST00000391014 CNTNAP4Q9C0A0 1308 aa3.47□□□□□ -1.85
RNU6-1228P-201ENST00000391014 LRRC10BA6NIK2 292 aa3.47□□□□□ -1.85
RNU6-1228P-201ENST00000391014 NEFLP07196 543 aa3.47□□□□□ -1.85
RNU6-1228P-201ENST00000391014 ZNF865P0CJ78 1059 aaPredicted RBP3.47□□□□□ -1.85
RNU6-1228P-201ENST00000391014 CFPP27918 469 aa3.47□□□□□ -1.85
RNU6-1228P-201ENST00000391014 FCGRTP55899 365 aa3.47□□□□□ -1.85
RNU6-1228P-201ENST00000391014 HNRNPUQ00839 825 aaKnown RBP eCLIP3.47□□□□□ -1.85
RNU6-1228P-201ENST00000391014 PKN1Q16512 942 aa3.47□□□□□ -1.85
RNU6-1228P-201ENST00000391014 MLANAQ16655 118 aa3.47□□□□□ -1.85
RNU6-1228P-201ENST00000391014 MAP1SQ66K74 1059 aaPredicted RBP3.47□□□□□ -1.85
RNU6-1228P-201ENST00000391014 C1QL4Q86Z23 238 aa3.47□□□□□ -1.85
RNU6-1228P-201ENST00000391014 GLYCTKQ8IVS8 523 aa3.47□□□□□ -1.85
RNU6-1228P-201ENST00000391014 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.47□□□□□ -1.85
RNU6-1228P-201ENST00000391014 SPACA3Q8IXA5 215 aa3.47□□□□□ -1.85
RNU6-1228P-201ENST00000391014 RNF214Q8ND24 703 aa3.47□□□□□ -1.85
RNU6-1228P-201ENST00000391014 FLAD1Q8NFF5 587 aa3.47□□□□□ -1.85
RNU6-1228P-201ENST00000391014 GRIN3AQ8TCU5 1115 aa3.47□□□□□ -1.85
RNU6-1228P-201ENST00000391014 GPBAR1Q8TDU6 330 aa3.47□□□□□ -1.85
RNU6-1228P-201ENST00000391014 DNAJC25Q9H1X3 360 aa3.47□□□□□ -1.85
RNU6-1228P-201ENST00000391014 SSU72Q9NP77 194 aaKnown RBP3.47□□□□□ -1.85
RNU6-1228P-201ENST00000391014 TMEM39AQ9NV64 488 aa3.47□□□□□ -1.85
RNU6-1228P-201ENST00000391014 CACNA2D2Q9NY47 1150 aa3.47□□□□□ -1.85
RNU6-1228P-201ENST00000391014 GPN3Q9UHW5 284 aaPredicted RBP3.47□□□□□ -1.85
RNU6-1228P-201ENST00000391014 CTNND2Q9UQB3 1225 aa3.47□□□□□ -1.85
RNU6-1228P-201ENST00000391014 CSADQ9Y600 493 aa3.47□□□□□ -1.85
RNU6-1228P-201ENST00000391014 NDUFB5O43674 189 aa3.46□□□□□ -1.86
RNU6-1228P-201ENST00000391014 KRT1P04264 644 aa3.46□□□□□ -1.86
RNU6-1228P-201ENST00000391014 ARNTP27540 789 aa3.46□□□□□ -1.86
RNU6-1228P-201ENST00000391014 ZP2Q05996 745 aa3.46□□□□□ -1.86
RNU6-1228P-201ENST00000391014 ZNF252P-AS1Q0IIN9 211 aa3.46□□□□□ -1.86
RNU6-1228P-201ENST00000391014 PDE3BQ13370 1112 aa3.46□□□□□ -1.86
RNU6-1228P-201ENST00000391014 PPM1JQ5JR12 505 aa3.46□□□□□ -1.86
RNU6-1228P-201ENST00000391014 ANGEL2Q5VTE6 544 aaKnown RBP3.46□□□□□ -1.86
RNU6-1228P-201ENST00000391014 DTHD1Q6ZMT9 781 aa3.46□□□□□ -1.86
RNU6-1228P-201ENST00000391014 LCNL1Q6ZST4 164 aa3.46□□□□□ -1.86
RNU6-1228P-201ENST00000391014 ARHGAP27Q6ZUM4 889 aa3.46□□□□□ -1.86
RNU6-1228P-201ENST00000391014 C12orf40Q86WS4 652 aa3.46□□□□□ -1.86
RNU6-1228P-201ENST00000391014 ZSWIM9Q86XI8 627 aa3.46□□□□□ -1.86
RNU6-1228P-201ENST00000391014 SULF2Q8IWU5 870 aa3.46□□□□□ -1.86
RNU6-1228P-201ENST00000391014 FAM84AQ96KN4 292 aa3.46□□□□□ -1.86
RNU6-1228P-201ENST00000391014 CSRNP1Q96S65 589 aa3.46□□□□□ -1.86
RNU6-1228P-201ENST00000391014 SNX11Q9Y5W9 270 aa3.46□□□□□ -1.86
RNU6-1228P-201ENST00000391014 DCDC2CA8MYV0 355 aa3.45□□□□□ -1.86
RNU6-1228P-201ENST00000391014 EOMESO95936 686 aa3.45□□□□□ -1.86
RNU6-1228P-201ENST00000391014 BMP6P22004 513 aa3.45□□□□□ -1.86
RNU6-1228P-201ENST00000391014 ERVK-24P63145 666 aa3.45□□□□□ -1.86
RNU6-1228P-201ENST00000391014 RING1Q06587 406 aa3.45□□□□□ -1.86
RNU6-1228P-201ENST00000391014 IKZF1Q13422 519 aa3.45□□□□□ -1.86
RNU6-1228P-201ENST00000391014 KCNMB1Q16558 191 aa3.45□□□□□ -1.86
RNU6-1228P-201ENST00000391014 RASIP1Q5U651 963 aa3.45□□□□□ -1.86
RNU6-1228P-201ENST00000391014 NXPE4Q6UWF7 544 aa3.45□□□□□ -1.86
RNU6-1228P-201ENST00000391014 PRR23BQ6ZRT6 265 aa3.45□□□□□ -1.86
RNU6-1228P-201ENST00000391014 TMC1Q8TDI8 760 aa3.45□□□□□ -1.86
RNU6-1228P-201ENST00000391014 SLC38A3Q99624 504 aa3.45□□□□□ -1.86
RNU6-1228P-201ENST00000391014 BCO2Q9BYV7 579 aa3.45□□□□□ -1.86
RNU6-1228P-201ENST00000391014 KCNK12Q9HB15 430 aa3.45□□□□□ -1.86
RNU6-1228P-201ENST00000391014 PRDM10Q9NQV6 1147 aa3.45□□□□□ -1.86
RNU6-1228P-201ENST00000391014 C19orf73Q9NVV2 129 aa3.45□□□□□ -1.86
RNU6-1228P-201ENST00000391014 TRAK1Q9UPV9 953 aa3.45□□□□□ -1.86
RNU6-1228P-201ENST00000391014 AKAP2Q9Y2D5 859 aa3.45□□□□□ -1.86
RNU6-1228P-201ENST00000391014 PRR33A8MZF0 331 aa3.44□□□□□ -1.86
RNU6-1228P-201ENST00000391014 IGF2BP3O00425 579 aaKnown RBP eCLIP3.44□□□□□ -1.86
RNU6-1228P-201ENST00000391014 PAGE1O75459 146 aa3.44□□□□□ -1.86
RNU6-1228P-201ENST00000391014 NME2P22392 152 aa3.44□□□□□ -1.86
RNU6-1228P-201ENST00000391014 PPP2R3AQ06190 1150 aa3.44□□□□□ -1.86
RNU6-1228P-201ENST00000391014 KRTAP19-4Q3LI73 84 aa3.44□□□□□ -1.86
RNU6-1228P-201ENST00000391014 TXNDC2Q86VQ3 553 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms