RNA–Protein interactions for RNA: ENST00000390687.8

SNRPN-202, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPN, Length 1,528 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-202ENST00000390687 MS4A4AQ96JQ5 239 aa18.21■□□□□ 0.51
SNRPN-202ENST00000390687 PTPN18Q99952 460 aa18.21■□□□□ 0.51
SNRPN-202ENST00000390687 R3HDMLQ9H3Y0 253 aa18.21■□□□□ 0.51
SNRPN-202ENST00000390687 NPM3O75607 178 aaKnown RBP18.2■□□□□ 0.5
SNRPN-202ENST00000390687 CAPN15O75808 1086 aa18.2■□□□□ 0.5
SNRPN-202ENST00000390687 MAP4K4O95819 1239 aaPredicted RBP18.2■□□□□ 0.5
SNRPN-202ENST00000390687 INPP5BP32019 993 aa18.2■□□□□ 0.5
SNRPN-202ENST00000390687 ADGRA1Q86SQ6 560 aa18.2■□□□□ 0.5
SNRPN-202ENST00000390687 ZSCAN29Q8IWY8 852 aaPredicted RBP18.2■□□□□ 0.5
SNRPN-202ENST00000390687 OTUD5Q96G74 571 aa18.2■□□□□ 0.5
SNRPN-202ENST00000390687 CFHR5Q9BXR6 569 aa18.2■□□□□ 0.5
SNRPN-202ENST00000390687 ANTXR1Q9H6X2 564 aa18.2■□□□□ 0.5
SNRPN-202ENST00000390687 ATRNL1Q5VV63 1379 aa18.2■□□□□ 0.5
SNRPN-202ENST00000390687 SPDYE5A6NIY4 337 aa18.19■□□□□ 0.5
SNRPN-202ENST00000390687 IGSF3O75054 1194 aa18.19■□□□□ 0.5
SNRPN-202ENST00000390687 ALDH1A1P00352 501 aa18.19■□□□□ 0.5
SNRPN-202ENST00000390687 SLURP2P0DP57 97 aa18.19■□□□□ 0.5
SNRPN-202ENST00000390687 PPP4CP60510 307 aa18.19■□□□□ 0.5
SNRPN-202ENST00000390687 MAP3K10Q02779 954 aa18.19■□□□□ 0.5
SNRPN-202ENST00000390687 ERO1BQ86YB8 467 aa18.19■□□□□ 0.5
SNRPN-202ENST00000390687 BCL11AQ9H165 835 aa18.19■□□□□ 0.5
SNRPN-202ENST00000390687 MYO5AQ9Y4I1 1855 aaKnown RBP18.19■□□□□ 0.5
SNRPN-202ENST00000390687 PHF20L1A8MW92 1017 aa18.18■□□□□ 0.5
SNRPN-202ENST00000390687 IFIT2P09913 472 aaKnown RBP18.18■□□□□ 0.5
SNRPN-202ENST00000390687 RRP1P56182 461 aaKnown RBP18.18■□□□□ 0.5
SNRPN-202ENST00000390687 SH3RF3Q8TEJ3 882 aaPredicted RBP18.18■□□□□ 0.5
SNRPN-202ENST00000390687 AATFQ9NY61 560 aaKnown RBP eCLIP18.18■□□□□ 0.5
SNRPN-202ENST00000390687 GPR25O00155 361 aa18.18■□□□□ 0.5
SNRPN-202ENST00000390687 BAG3O95817 575 aa18.18■□□□□ 0.5
SNRPN-202ENST00000390687 TEX11Q8IYF3 940 aa18.18■□□□□ 0.5
SNRPN-202ENST00000390687 ZNF296Q8WUU4 475 aaPredicted RBP18.18■□□□□ 0.5
SNRPN-202ENST00000390687 LAMB1P07942 1786 aa18.17■□□□□ 0.5
SNRPN-202ENST00000390687 IRF6O14896 467 aa18.17■□□□□ 0.5
SNRPN-202ENST00000390687 IDH1O75874 414 aaKnown RBP18.17■□□□□ 0.5
SNRPN-202ENST00000390687 GTF2A2P52657 109 aa18.17■□□□□ 0.5
SNRPN-202ENST00000390687 NOM1Q5C9Z4 860 aaKnown RBP18.17■□□□□ 0.5
SNRPN-202ENST00000390687 BRI3BPQ8WY22 251 aa18.17■□□□□ 0.5
SNRPN-202ENST00000390687 ABHD8Q96I13 439 aa18.17■□□□□ 0.5
SNRPN-202ENST00000390687 MCOLN1Q9GZU1 580 aa18.17■□□□□ 0.5
SNRPN-202ENST00000390687 CCL15-CCL14A0A0B4J2E2 113 aa18.16■□□□□ 0.5
SNRPN-202ENST00000390687 CYP7A1P22680 504 aa18.16■□□□□ 0.5
SNRPN-202ENST00000390687 PPATQ06203 517 aa18.16■□□□□ 0.5
SNRPN-202ENST00000390687 DGKZQ13574 1117 aa18.16■□□□□ 0.5
SNRPN-202ENST00000390687 CCL15Q16663 113 aa18.16■□□□□ 0.5
SNRPN-202ENST00000390687 OTUD7BQ6GQQ9 843 aa18.16■□□□□ 0.5
SNRPN-202ENST00000390687 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.16■□□□□ 0.5
SNRPN-202ENST00000390687 NOL10Q9BSC4 688 aaKnown RBP18.16■□□□□ 0.5
SNRPN-202ENST00000390687 OSBPL5Q9H0X9 879 aaPredicted RBP18.16■□□□□ 0.5
SNRPN-202ENST00000390687 DCTPP1Q9H773 170 aa18.16■□□□□ 0.5
SNRPN-202ENST00000390687 PCDHB15Q9Y5E8 787 aa18.16■□□□□ 0.5
SNRPN-202ENST00000390687 PPIL2Q13356 520 aa18.15■□□□□ 0.5
SNRPN-202ENST00000390687 NOL9Q5SY16 702 aaKnown RBP18.15■□□□□ 0.5
SNRPN-202ENST00000390687 MAGEB6Q8N7X4 407 aa18.15■□□□□ 0.5
SNRPN-202ENST00000390687 LRRCC1Q9C099 1032 aa18.15■□□□□ 0.5
SNRPN-202ENST00000390687 SMARCA5O60264 1052 aaPredicted RBP18.14■□□□□ 0.49
SNRPN-202ENST00000390687 TBC1D12O60347 775 aa18.14■□□□□ 0.49
SNRPN-202ENST00000390687 PLCG2P16885 1265 aa18.14■□□□□ 0.49
SNRPN-202ENST00000390687 DYNLL1P63167 89 aaKnown RBP18.14■□□□□ 0.49
SNRPN-202ENST00000390687 MAP3K12Q12852 859 aa18.14■□□□□ 0.49
SNRPN-202ENST00000390687 TGFBRAP1Q8WUH2 860 aa18.14■□□□□ 0.49
SNRPN-202ENST00000390687 CRHR2Q13324 411 aa18.13■□□□□ 0.49
SNRPN-202ENST00000390687 SNAPC2Q13487 334 aa18.13■□□□□ 0.49
SNRPN-202ENST00000390687 CENPFP49454 3210 aa18.13■□□□□ 0.49
SNRPN-202ENST00000390687 FKTNO75072 461 aa18.13■□□□□ 0.49
SNRPN-202ENST00000390687 CETPP11597 493 aa18.13■□□□□ 0.49
SNRPN-202ENST00000390687 TTF1Q15361 905 aaPredicted RBP18.13■□□□□ 0.49
SNRPN-202ENST00000390687 MAPKAPK5Q8IW41 473 aa18.13■□□□□ 0.49
SNRPN-202ENST00000390687 FAM43AQ8N2R8 423 aa18.13■□□□□ 0.49
SNRPN-202ENST00000390687 MIGA1Q8NAN2 632 aa18.13■□□□□ 0.49
SNRPN-202ENST00000390687 DNAJC2Q99543 621 aaKnown RBP18.13■□□□□ 0.49
SNRPN-202ENST00000390687 DOCK2Q92608 1830 aa18.12■□□□□ 0.49
SNRPN-202ENST00000390687 MAST2Q6P0Q8 1798 aa18.12■□□□□ 0.49
SNRPN-202ENST00000390687 COL2A1P02458 1487 aaPredicted RBP18.12■□□□□ 0.49
SNRPN-202ENST00000390687 FAM196BA6NMK8 535 aa18.12■□□□□ 0.49
SNRPN-202ENST00000390687 GOLIM4O00461 696 aa18.12■□□□□ 0.49
SNRPN-202ENST00000390687 ATP5JP18859 108 aa18.12■□□□□ 0.49
SNRPN-202ENST00000390687 CTU1Q7Z7A3 348 aaKnown RBP18.12■□□□□ 0.49
SNRPN-202ENST00000390687 SCYL3Q8IZE3 742 aa18.12■□□□□ 0.49
SNRPN-202ENST00000390687 EDC3Q96F86 508 aaKnown RBP18.12■□□□□ 0.49
SNRPN-202ENST00000390687 CRBNQ96SW2 442 aa18.12■□□□□ 0.49
SNRPN-202ENST00000390687 BOLA2Q9H3K6 86 aa18.12■□□□□ 0.49
SNRPN-202ENST00000390687 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.12■□□□□ 0.492e-53■■■■■ 172.3
SNRPN-202ENST00000390687 KCNH4Q9UQ05 1017 aa18.12■□□□□ 0.49
SNRPN-202ENST00000390687 FLT1P17948 1338 aa18.11■□□□□ 0.49
SNRPN-202ENST00000390687 BTBD19C9JJ37 291 aa18.11■□□□□ 0.49
SNRPN-202ENST00000390687 CTNND1O60716 968 aaKnown RBP18.11■□□□□ 0.49
SNRPN-202ENST00000390687 TMED8Q6PL24 325 aaPredicted RBP18.11■□□□□ 0.49
SNRPN-202ENST00000390687 DHX36Q9H2U1 1008 aaKnown RBP18.11■□□□□ 0.49
SNRPN-202ENST00000390687 PI4KBQ9UBF8 816 aa18.11■□□□□ 0.49
SNRPN-202ENST00000390687 PTPRAP18433 802 aa18.1■□□□□ 0.49
SNRPN-202ENST00000390687 SLC9C2Q5TAH2 1124 aa18.1■□□□□ 0.49
SNRPN-202ENST00000390687 PICK1Q9NRD5 415 aa18.1■□□□□ 0.49
SNRPN-202ENST00000390687 ZHX2Q9Y6X8 837 aa18.1■□□□□ 0.49
SNRPN-202ENST00000390687 HTTP42858 3142 aa18.1■□□□□ 0.49
SNRPN-202ENST00000390687 CXCL11O14625 94 aa18.09■□□□□ 0.49
SNRPN-202ENST00000390687 PDE6AP16499 860 aa18.09■□□□□ 0.49
SNRPN-202ENST00000390687 MOGSQ13724 837 aa18.09■□□□□ 0.49
SNRPN-202ENST00000390687 RRP1BQ14684 758 aaKnown RBP18.09■□□□□ 0.49
SNRPN-202ENST00000390687 HAUS7Q99871 368 aa18.09■□□□□ 0.49
SNRPN-202ENST00000390687 RIOK1Q9BRS2 568 aaKnown RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms