RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.13■■□□□ 1.45
COL23A1-201ENST00000390654 ZSWIM4Q9H7M6 989 aa24.13■■□□□ 1.45
COL23A1-201ENST00000390654 TUBE1Q9UJT0 475 aa24.13■■□□□ 1.45
COL23A1-201ENST00000390654 HPSEQ9Y251 543 aa24.13■■□□□ 1.45
COL23A1-201ENST00000390654 hCG_1642624A0A1W2PR95 340 aa24.12■■□□□ 1.45
COL23A1-201ENST00000390654 POLR3GO15318 223 aaPredicted RBP24.12■■□□□ 1.45
COL23A1-201ENST00000390654 POLR2DO15514 142 aaKnown RBP24.12■■□□□ 1.45
COL23A1-201ENST00000390654 PDE6AP16499 860 aa24.12■■□□□ 1.45
COL23A1-201ENST00000390654 NUP133Q8WUM0 1156 aa24.12■■□□□ 1.45
COL23A1-201ENST00000390654 ARMT1Q9H993 441 aa24.12■■□□□ 1.45
COL23A1-201ENST00000390654 FAM217BQ9NTX9 383 aaPredicted RBP24.12■■□□□ 1.45
COL23A1-201ENST00000390654 SLC12A7Q9Y666 1083 aa24.12■■□□□ 1.45
COL23A1-201ENST00000390654 IKBKBO14920 756 aa24.12■■□□□ 1.45
COL23A1-201ENST00000390654 FMR1Q06787 632 aaKnown RBP eCLIP24.12■■□□□ 1.45
COL23A1-201ENST00000390654 CCDC93Q567U6 631 aa24.12■■□□□ 1.45
COL23A1-201ENST00000390654 KRBA2Q6ZNG9 492 aa24.12■■□□□ 1.45
COL23A1-201ENST00000390654 USP49Q70CQ1 688 aa24.12■■□□□ 1.45
COL23A1-201ENST00000390654 RIPOR2Q9Y4F9 1068 aa24.12■■□□□ 1.45
COL23A1-201ENST00000390654 GABPB1Q06547 395 aaPredicted RBP24.12■■□□□ 1.45
COL23A1-201ENST00000390654 TRIM65Q6PJ69 517 aa24.12■■□□□ 1.45
COL23A1-201ENST00000390654 TACC3Q9Y6A5 838 aa24.12■■□□□ 1.45
COL23A1-201ENST00000390654 CPDO75976 1380 aa24.11■■□□□ 1.45
COL23A1-201ENST00000390654 COBLO75128 1261 aa24.11■■□□□ 1.45
COL23A1-201ENST00000390654 CASP1P29466 404 aa24.11■■□□□ 1.45
COL23A1-201ENST00000390654 KARSQ15046 597 aaKnown RBP24.11■■□□□ 1.45
COL23A1-201ENST00000390654 TTLL11Q8NHH1 800 aa24.11■■□□□ 1.45
COL23A1-201ENST00000390654 IGDCC4Q8TDY8 1250 aa24.11■■□□□ 1.45
COL23A1-201ENST00000390654 RESP18Q5W5W9 173 aa24.11■■□□□ 1.45
COL23A1-201ENST00000390654 KLHL10Q6JEL2 608 aa24.11■■□□□ 1.45
COL23A1-201ENST00000390654 CPLX3Q8WVH0 158 aa24.11■■□□□ 1.45
COL23A1-201ENST00000390654 LY9Q9HBG7 655 aa24.11■■□□□ 1.45
COL23A1-201ENST00000390654 SERTAD1Q9UHV2 236 aa24.11■■□□□ 1.45
COL23A1-201ENST00000390654 NFE2L3Q9Y4A8 694 aa24.11■■□□□ 1.45
COL23A1-201ENST00000390654 CDKL5O76039 1030 aa24.1■■□□□ 1.45
COL23A1-201ENST00000390654 GNG11P61952 73 aa24.1■■□□□ 1.45
COL23A1-201ENST00000390654 NTRK3Q16288 839 aa24.1■■□□□ 1.45
COL23A1-201ENST00000390654 VSTM4Q8IW00 320 aa24.1■■□□□ 1.45
COL23A1-201ENST00000390654 MAGEB6Q8N7X4 407 aa24.1■■□□□ 1.45
COL23A1-201ENST00000390654 WDR24Q96S15 920 aa24.1■■□□□ 1.45
COL23A1-201ENST00000390654 IRS4O14654 1257 aaPredicted RBP24.1■■□□□ 1.45
COL23A1-201ENST00000390654 MBD4O95243 580 aa24.1■■□□□ 1.45
COL23A1-201ENST00000390654 TOGARAM2Q6ZUX3 1019 aa24.1■■□□□ 1.45
COL23A1-201ENST00000390654 REXO1L1PQ8IX06 675 aa24.1■■□□□ 1.45
COL23A1-201ENST00000390654 ZBTB38Q8NAP3 1195 aaPredicted RBP24.1■■□□□ 1.45
COL23A1-201ENST00000390654 IRX2Q9BZI1 471 aaPredicted RBP24.1■■□□□ 1.45
COL23A1-201ENST00000390654 NAPBQ9H115 298 aa24.1■■□□□ 1.45
COL23A1-201ENST00000390654 ZBTB1Q9Y2K1 713 aa24.1■■□□□ 1.45
COL23A1-201ENST00000390654 DIS3L2Q8IYB7 885 aaKnown RBP24.09■■□□□ 1.45
COL23A1-201ENST00000390654 SAMSN1Q9NSI8 373 aaKnown RBP24.09■■□□□ 1.45
COL23A1-201ENST00000390654 PCCAP05165 728 aaPredicted RBP24.09■■□□□ 1.45
COL23A1-201ENST00000390654 SSRP1Q08945 709 aaKnown RBP24.09■■□□□ 1.45
COL23A1-201ENST00000390654 MIGA1Q8NAN2 632 aa24.09■■□□□ 1.45
COL23A1-201ENST00000390654 SMIM22K7EJ46 135 aa24.09■■□□□ 1.45
COL23A1-201ENST00000390654 PPP6R2O75170 966 aa24.09■■□□□ 1.45
COL23A1-201ENST00000390654 H2AFXP16104 143 aaPredicted RBP24.09■■□□□ 1.45
COL23A1-201ENST00000390654 STX17P56962 302 aa24.09■■□□□ 1.45
COL23A1-201ENST00000390654 EPB41L4AQ9HCS5 686 aaPredicted RBP24.09■■□□□ 1.45
COL23A1-201ENST00000390654 PPP2R2CQ9Y2T4 447 aa24.09■■□□□ 1.45
COL23A1-201ENST00000390654 PCDHB6Q9Y5E3 794 aa24.09■■□□□ 1.45
COL23A1-201ENST00000390654 FHOD1Q9Y613 1164 aa24.09■■□□□ 1.45
COL23A1-201ENST00000390654 ALS2Q96Q42 1657 aa24.08■■□□□ 1.45
COL23A1-201ENST00000390654 ZBTB22O15209 634 aa24.08■■□□□ 1.45
COL23A1-201ENST00000390654 CBFA2T2O43439 604 aa24.08■■□□□ 1.45
COL23A1-201ENST00000390654 MTF1Q14872 753 aa24.08■■□□□ 1.45
COL23A1-201ENST00000390654 SEC31BQ9NQW1 1179 aa24.08■■□□□ 1.45
COL23A1-201ENST00000390654 KCND1Q9NSA2 647 aa24.08■■□□□ 1.45
COL23A1-201ENST00000390654 ANKRD18BA2A2Z9 1011 aa24.08■■□□□ 1.45
COL23A1-201ENST00000390654 TEX35Q5T0J7 233 aa24.08■■□□□ 1.45
COL23A1-201ENST00000390654 KRI1Q8N9T8 703 aaKnown RBP24.08■■□□□ 1.45
COL23A1-201ENST00000390654 OXER1Q8TDS5 423 aa24.08■■□□□ 1.45
COL23A1-201ENST00000390654 TOB1P50616 345 aaPredicted RBP24.07■■□□□ 1.44
COL23A1-201ENST00000390654 TRERF1Q96PN7 1200 aa24.07■■□□□ 1.44
COL23A1-201ENST00000390654 MAN1B1Q9UKM7 699 aa24.07■■□□□ 1.44
COL23A1-201ENST00000390654 VWA3AA6NCI4 1184 aa24.07■■□□□ 1.44
COL23A1-201ENST00000390654 TIGD1Q96MW7 591 aa24.07■■□□□ 1.44
COL23A1-201ENST00000390654 STRBPQ96SI9 672 aaKnown RBP24.07■■□□□ 1.44
COL23A1-201ENST00000390654 BAG1Q99933 345 aaPredicted RBP24.07■■□□□ 1.44
COL23A1-201ENST00000390654 BTG4Q9NY30 223 aa24.07■■□□□ 1.44
COL23A1-201ENST00000390654 A0A0U1RQG5 324 aaPredicted RBP24.07■■□□□ 1.44
COL23A1-201ENST00000390654 STARD3NLO95772 234 aa24.07■■□□□ 1.44
COL23A1-201ENST00000390654 CSF1RP07333 972 aa24.07■■□□□ 1.44
COL23A1-201ENST00000390654 PNMA6AP0CW24 399 aaPredicted RBP24.07■■□□□ 1.44
COL23A1-201ENST00000390654 AFMP43652 599 aa24.07■■□□□ 1.44
COL23A1-201ENST00000390654 BMS1Q14692 1282 aaKnown RBP24.07■■□□□ 1.44
COL23A1-201ENST00000390654 CREBRFQ8IUR6 639 aa24.07■■□□□ 1.44
COL23A1-201ENST00000390654 NOSTRINQ8IVI9 506 aa24.07■■□□□ 1.44
COL23A1-201ENST00000390654 FAM205CA6NFA0 338 aa24.06■■□□□ 1.44
COL23A1-201ENST00000390654 NLRP10Q86W26 655 aa24.06■■□□□ 1.44
COL23A1-201ENST00000390654 IFNL3Q8IZI9 196 aa24.06■■□□□ 1.44
COL23A1-201ENST00000390654 A0A0U1RQJ8 604 aa24.06■■□□□ 1.44
COL23A1-201ENST00000390654 CUTAO60888 179 aa24.06■■□□□ 1.44
COL23A1-201ENST00000390654 ATRIPQ8WXE1 791 aa24.06■■□□□ 1.44
COL23A1-201ENST00000390654 CCDC34Q96HJ3 373 aa24.06■■□□□ 1.44
COL23A1-201ENST00000390654 ZCCHC17Q9NP64 241 aaKnown RBP24.06■■□□□ 1.44
COL23A1-201ENST00000390654 PARP3Q9Y6F1 533 aa24.06■■□□□ 1.44
COL23A1-201ENST00000390654 RIC1Q4ADV7 1423 aa24.05■■□□□ 1.44
COL23A1-201ENST00000390654 POSTNQ15063 836 aa24.05■■□□□ 1.44
COL23A1-201ENST00000390654 TMCO3Q6UWJ1 677 aa24.05■■□□□ 1.44
COL23A1-201ENST00000390654 STAMQ92783 540 aa24.05■■□□□ 1.44
COL23A1-201ENST00000390654 NOL10Q9BSC4 688 aaKnown RBP24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms