RNA–Protein interactions for RNA: ENST00000390498.1

TRAJ39-201, Transcript of T cell receptor alpha joining 39, humanhuman

APPRIS P1 BASIC

Gene TRAJ39, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ39-201ENST00000390498 MYO1HQ8N1T3 1032 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 AFAP1L2Q8N4X5 818 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 RIN3Q8TB24 985 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 RNF217Q8TC41 542 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 ASAP3Q8TDY4 903 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 PNISRQ8TF01 805 aaKnown RBP2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 FBXO41Q8TF61 875 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 TMEM40Q8WWA1 233 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 KISS1RQ969F8 398 aaPredicted RBP2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 FAM163AQ96GL9 167 aaPredicted RBP2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 SLC39A13Q96H72 371 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 IPO9Q96P70 1041 aaKnown RBP2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 PNMA5Q96PV4 448 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 CAMKK2Q96RR4 588 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 DHRS4Q9BTZ2 278 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 MRPL4Q9BYD3 311 aaKnown RBP2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 PBX4Q9BYU1 374 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 ASPSCR1Q9BZE9 553 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 CLEC4MQ9H2X3 399 aaPredicted RBP2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 ARNT2Q9HBZ2 717 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 NCOA5Q9HCD5 579 aaKnown RBP2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 ZFATQ9P243 1243 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 POLR3KQ9Y2Y1 108 aaPredicted RBP2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 SPEF1Q9Y4P9 236 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 SHTN1A0MZ66 631 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 GOLGA6CA6NDK9 693 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 GOLGA6BA6NDN3 693 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 METTL12A8MUP2 240 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 EFSO43281 561 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 AKAP10O43572 662 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 SH3BP5O60239 455 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 SUSD5O60279 629 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 PPFIA4O75335 1185 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 RAPGEF3O95398 923 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 NPTXRO95502 500 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 EYA4O95677 639 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 SCGB1D2O95969 90 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 LDHAP00338 332 aaKnown RBP2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 F11P03951 625 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 GOLGA6DP0CG33 693 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 ARAFP10398 606 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 NAT2P11245 290 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 ACPPP15309 386 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 ATF3P18847 181 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 NFKB1P19838 968 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 POU3F2P20265 443 aaPredicted RBP2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 CCNFP41002 786 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 ZNF143P52747 638 aaPredicted RBP2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 NRLP54845 237 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 PCDH1Q08174 1060 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 ZNF252P-AS1Q0IIN9 211 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 SFSWAPQ12872 951 aaKnown RBP2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 MAP7Q14244 749 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 CBX2Q14781 532 aaPredicted RBP2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 BRD3Q15059 726 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 ZRSR2Q15696 482 aaKnown RBP2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 SLC10A6Q3KNW5 377 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 AXDND1Q5T1B0 1012 aaPredicted RBP2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 RNF219Q5W0B1 726 aaPredicted RBP2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 SPRYD7Q5W111 196 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 NXNQ6DKJ4 435 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 PPP4R4Q6NUP7 873 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 UNC5AQ6ZN44 842 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 DHX32Q7L7V1 743 aaKnown RBP2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 LRRTM3Q86VH5 581 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 SULF2Q8IWU5 870 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 SCUBE1Q8IWY4 988 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 LINC00528Q8N1L1 170 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 PPM1KQ8N3J5 372 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 UBR7Q8N806 425 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 TTC8Q8TAM2 541 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 DDX54Q8TDD1 881 aaKnown RBP2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 BSNDQ8WZ55 320 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 DDX1Q92499 740 aaKnown RBP2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 GAL3ST3Q96A11 431 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 IL17RAQ96F46 866 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 HHIPQ96QV1 700 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 CDC6Q99741 560 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 TARS2Q9BW92 718 aaKnown RBP2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 MAF1Q9H063 256 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 MUC3BQ9H195 1237 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 RUBCNLQ9H714 662 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 CBX8Q9HC52 389 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 GOLGA6AQ9NYA3 693 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 TERF2IPQ9NYB0 399 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 GMIPQ9P107 970 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 DACH1Q9UI36 760 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 DYRK1BQ9Y463 629 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 PCDHGC4Q9Y5F7 938 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 TACC3Q9Y6A5 838 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 PHLDB1Q86UU1 1377 aa2.18□□□□□ -2.06
TRAJ39-201ENST00000390498 LTBP3Q9NS15 1303 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 TRAV20A0A0B4J274 112 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 LOC102724428A0A0B4J2F2 783 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 TTC24A2A3L6 582 aaPredicted RBP2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 SLC22A31A6NKX4 558 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 J3QL48 77 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 GFRA2O00451 464 aa2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 IFRD1O00458 451 aaPredicted RBP2.17□□□□□ -2.06
TRAJ39-201ENST00000390498 TNFRSF10CO14798 259 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms