RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 PLAURQ03405 335 aa3.23□□□□□ -1.89
TRAV41-201ENST00000390468 OS9Q13438 667 aaPredicted RBP3.23□□□□□ -1.89
TRAV41-201ENST00000390468 BECN1Q14457 450 aa3.23□□□□□ -1.89
TRAV41-201ENST00000390468 HSP90AB3PQ58FF7 597 aa3.23□□□□□ -1.89
TRAV41-201ENST00000390468 C1orf53Q5VUE5 145 aa3.23□□□□□ -1.89
TRAV41-201ENST00000390468 MCTP1Q6DN14 999 aa3.23□□□□□ -1.89
TRAV41-201ENST00000390468 EDC4Q6P2E9 1401 aaKnown RBP3.23□□□□□ -1.89
TRAV41-201ENST00000390468 ELMSAN1Q6PJG2 1045 aa3.23□□□□□ -1.89
TRAV41-201ENST00000390468 HFE2Q6ZVN8 426 aa3.23□□□□□ -1.89
TRAV41-201ENST00000390468 NLRP13Q86W25 1043 aa3.23□□□□□ -1.89
TRAV41-201ENST00000390468 TRIM50Q86XT4 487 aa3.23□□□□□ -1.89
TRAV41-201ENST00000390468 WFDC8Q8IUA0 241 aa3.23□□□□□ -1.89
TRAV41-201ENST00000390468 AEBP1Q8IUX7 1158 aa3.23□□□□□ -1.89
TRAV41-201ENST00000390468 MEGF10Q96KG7 1140 aa3.23□□□□□ -1.89
TRAV41-201ENST00000390468 SLC12A5Q9H2X9 1139 aa3.23□□□□□ -1.89
TRAV41-201ENST00000390468 MYH16Q9H6N6 1097 aa3.23□□□□□ -1.89
TRAV41-201ENST00000390468 GOLGA2P5Q9HBQ8 144 aa3.23□□□□□ -1.89
TRAV41-201ENST00000390468 RBM28Q9NW13 759 aaKnown RBP3.23□□□□□ -1.89
TRAV41-201ENST00000390468 FAM13BQ9NYF5 915 aa3.23□□□□□ -1.89
TRAV41-201ENST00000390468 USP6P35125 1406 aa3.22□□□□□ -1.89
TRAV41-201ENST00000390468 USP17L3A6NCW0 530 aa3.22□□□□□ -1.89
TRAV41-201ENST00000390468 USP17L4A6NCW7 530 aa3.22□□□□□ -1.89
TRAV41-201ENST00000390468 COBLO75128 1261 aa3.22□□□□□ -1.89
TRAV41-201ENST00000390468 ALX3O95076 343 aa3.22□□□□□ -1.89
TRAV41-201ENST00000390468 KCNA6P17658 529 aa3.22□□□□□ -1.89
TRAV41-201ENST00000390468 PPP2R1AP30153 589 aa3.22□□□□□ -1.89
TRAV41-201ENST00000390468 TNNT3P45378 269 aaPredicted RBP3.22□□□□□ -1.89
TRAV41-201ENST00000390468 ATP1A2P50993 1020 aa3.22□□□□□ -1.89
TRAV41-201ENST00000390468 KCNQ4P56696 695 aa3.22□□□□□ -1.89
TRAV41-201ENST00000390468 CLDN10P78369 228 aa3.22□□□□□ -1.89
TRAV41-201ENST00000390468 CCINQ13939 588 aa3.22□□□□□ -1.89
TRAV41-201ENST00000390468 WDR43Q15061 677 aaKnown RBP eCLIP3.22□□□□□ -1.89
TRAV41-201ENST00000390468 MSL1Q68DK7 614 aa3.22□□□□□ -1.89
TRAV41-201ENST00000390468 CTR9Q6PD62 1173 aa3.22□□□□□ -1.89
TRAV41-201ENST00000390468 USP17L2Q6R6M4 530 aa3.22□□□□□ -1.89
TRAV41-201ENST00000390468 USP17L1Q7RTZ2 530 aa3.22□□□□□ -1.89
TRAV41-201ENST00000390468 MORC1Q86VD1 984 aa3.22□□□□□ -1.89
TRAV41-201ENST00000390468 OGFOD1Q8N543 542 aa3.22□□□□□ -1.89
TRAV41-201ENST00000390468 GPATCH11Q8N954 259 aa3.22□□□□□ -1.89
TRAV41-201ENST00000390468 SCG3Q8WXD2 468 aaKnown RBP3.22□□□□□ -1.89
TRAV41-201ENST00000390468 GLMNQ92990 594 aa3.22□□□□□ -1.89
TRAV41-201ENST00000390468 NUDT16Q96DE0 195 aaKnown RBP3.22□□□□□ -1.89
TRAV41-201ENST00000390468 KRTAP9-9Q9BYP9 154 aa3.22□□□□□ -1.89
TRAV41-201ENST00000390468 KRTAP9-4Q9BYQ2 154 aa3.22□□□□□ -1.89
TRAV41-201ENST00000390468 GSX2Q9BZM3 304 aa3.22□□□□□ -1.89
TRAV41-201ENST00000390468 RNF112Q9ULX5 631 aa3.22□□□□□ -1.89
TRAV41-201ENST00000390468 ROBO1Q9Y6N7 1651 aa3.22□□□□□ -1.89
TRAV41-201ENST00000390468 SCN11AQ9UI33 1791 aa3.22□□□□□ -1.89
TRAV41-201ENST00000390468 CDK12Q9NYV4 1490 aaPredicted RBP3.22□□□□□ -1.89
TRAV41-201ENST00000390468 PARP4Q9UKK3 1724 aaKnown RBP3.22□□□□□ -1.89
TRAV41-201ENST00000390468 DCCP43146 1447 aa3.21□□□□□ -1.9
TRAV41-201ENST00000390468 BLMP54132 1417 aaPredicted RBP3.21□□□□□ -1.9
TRAV41-201ENST00000390468 CPSF1Q10570 1443 aaKnown RBP3.21□□□□□ -1.9
TRAV41-201ENST00000390468 NCOA3Q9Y6Q9 1424 aa3.21□□□□□ -1.9
TRAV41-201ENST00000390468 POM121CA8CG34 1229 aa3.21□□□□□ -1.9
TRAV41-201ENST00000390468 E9PSI1 815 aa3.21□□□□□ -1.9
TRAV41-201ENST00000390468 ZBTB7BO15156 539 aaPredicted RBP3.21□□□□□ -1.9
TRAV41-201ENST00000390468 PAX4O43316 350 aa3.21□□□□□ -1.9
TRAV41-201ENST00000390468 LZTS3O60299 673 aaPredicted RBP3.21□□□□□ -1.9
TRAV41-201ENST00000390468 EIF2AK2P19525 551 aaKnown RBP3.21□□□□□ -1.9
TRAV41-201ENST00000390468 FSTP19883 344 aa3.21□□□□□ -1.9
TRAV41-201ENST00000390468 ANAPC15P60006 121 aa3.21□□□□□ -1.9
TRAV41-201ENST00000390468 LMOD3Q0VAK6 560 aa3.21□□□□□ -1.9
TRAV41-201ENST00000390468 CCDC184Q52MB2 194 aa3.21□□□□□ -1.9
TRAV41-201ENST00000390468 PERM1Q5SV97 790 aa3.21□□□□□ -1.9
TRAV41-201ENST00000390468 CASC1Q6TDU7 716 aa3.21□□□□□ -1.9
TRAV41-201ENST00000390468 PRR23CQ6ZRP0 262 aa3.21□□□□□ -1.9
TRAV41-201ENST00000390468 ZNF771Q7L3S4 317 aaPredicted RBP3.21□□□□□ -1.9
TRAV41-201ENST00000390468 FBXO11Q86XK2 927 aa3.21□□□□□ -1.9
TRAV41-201ENST00000390468 KRTAP19-1Q8IUB9 90 aa3.21□□□□□ -1.9
TRAV41-201ENST00000390468 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.21□□□□□ -1.9
TRAV41-201ENST00000390468 RETREG2Q8NC44 543 aa3.21□□□□□ -1.9
TRAV41-201ENST00000390468 CFAP53Q96M91 514 aa3.21□□□□□ -1.9
TRAV41-201ENST00000390468 HINFPQ9BQA5 517 aa3.21□□□□□ -1.9
TRAV41-201ENST00000390468 SSBP4Q9BWG4 385 aaPredicted RBP3.21□□□□□ -1.9
TRAV41-201ENST00000390468 SMG9Q9H0W8 520 aaKnown RBP3.21□□□□□ -1.9
TRAV41-201ENST00000390468 ALG2Q9H553 416 aa3.21□□□□□ -1.9
TRAV41-201ENST00000390468 EFCC1Q9HA90 598 aa3.21□□□□□ -1.9
TRAV41-201ENST00000390468 CGNQ9P2M7 1197 aaKnown RBP3.21□□□□□ -1.9
TRAV41-201ENST00000390468 MKRN1Q9UHC7 482 aaKnown RBP3.21□□□□□ -1.9
TRAV41-201ENST00000390468 KIF3AQ9Y496 699 aa3.21□□□□□ -1.9
TRAV41-201ENST00000390468 POLR3AO14802 1390 aaPredicted RBP3.21□□□□□ -1.9
TRAV41-201ENST00000390468 MSH6P52701 1360 aa3.21□□□□□ -1.9
TRAV41-201ENST00000390468 COL3A1P02461 1466 aaPredicted RBP3.21□□□□□ -1.9
TRAV41-201ENST00000390468 ITGB4P16144 1822 aa3.21□□□□□ -1.9
TRAV41-201ENST00000390468 PLCH1Q4KWH8 1693 aa3.2□□□□□ -1.9
TRAV41-201ENST00000390468 LMO7Q8WWI1 1683 aa3.2□□□□□ -1.9
TRAV41-201ENST00000390468 CAMTA1Q9Y6Y1 1673 aa3.2□□□□□ -1.9
TRAV41-201ENST00000390468 ACEP12821 1306 aa3.2□□□□□ -1.9
TRAV41-201ENST00000390468 ZBED9Q6R2W3 1325 aa3.2□□□□□ -1.9
TRAV41-201ENST00000390468 TTC21AQ8NDW8 1320 aa3.2□□□□□ -1.9
TRAV41-201ENST00000390468 PRR36Q9H6K5 1346 aa3.2□□□□□ -1.9
TRAV41-201ENST00000390468 SIPA1L3O60292 1781 aaPredicted RBP3.2□□□□□ -1.9
TRAV41-201ENST00000390468 COL18A1P39060 1754 aa3.2□□□□□ -1.9
TRAV41-201ENST00000390468 OVOS2A0A0J9YW53 1432 aa3.2□□□□□ -1.9
TRAV41-201ENST00000390468 OVOS2Q6IE36 1432 aa3.2□□□□□ -1.9
TRAV41-201ENST00000390468 SMG6Q86US8 1419 aaKnown RBP3.2□□□□□ -1.9
TRAV41-201ENST00000390468 UQCRHLA0A096LP55 91 aa3.2□□□□□ -1.9
TRAV41-201ENST00000390468 PALM3A6NDB9 673 aaPredicted RBP3.2□□□□□ -1.9
TRAV41-201ENST00000390468 TTC36A6NLP5 189 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms