RNA–Protein interactions for RNA: ENST00000390427.3

TRAV5-201, Transcript of T cell receptor alpha variable 5, humanhuman

APPRIS P1 BASIC

Gene TRAV5, Length 352 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5-201ENST00000390427 CFAP45Q9UL16 551 aa8.28□□□□□ -1.08
TRAV5-201ENST00000390427 TCHHQ07283 1943 aa8.28□□□□□ -1.08
TRAV5-201ENST00000390427 PASKQ96RG2 1323 aa8.28□□□□□ -1.08
TRAV5-201ENST00000390427 DICER1Q9UPY3 1922 aaKnown RBP8.27□□□□□ -1.09
TRAV5-201ENST00000390427 TMEM88BA6NKF7 163 aa8.27□□□□□ -1.09
TRAV5-201ENST00000390427 KIF2AO00139 706 aaPredicted RBP8.27□□□□□ -1.09
TRAV5-201ENST00000390427 CYP19A1P11511 503 aaPredicted RBP8.27□□□□□ -1.09
TRAV5-201ENST00000390427 LIG1P18858 919 aa8.27□□□□□ -1.09
TRAV5-201ENST00000390427 FECHP22830 423 aa8.27□□□□□ -1.09
TRAV5-201ENST00000390427 PTGS1P23219 599 aa8.27□□□□□ -1.09
TRAV5-201ENST00000390427 GABPB1Q06547 395 aaPredicted RBP8.27□□□□□ -1.09
TRAV5-201ENST00000390427 G3BP1Q13283 466 aaKnown RBP eCLIP8.27□□□□□ -1.09
TRAV5-201ENST00000390427 NAA16Q6N069 864 aaPredicted RBP8.27□□□□□ -1.09
TRAV5-201ENST00000390427 ZSCAN25Q6NSZ9 544 aa8.27□□□□□ -1.09
TRAV5-201ENST00000390427 AACSQ86V21 672 aa8.27□□□□□ -1.09
TRAV5-201ENST00000390427 CREBRFQ8IUR6 639 aa8.27□□□□□ -1.09
TRAV5-201ENST00000390427 C17orf53Q8N3J3 647 aaPredicted RBP8.27□□□□□ -1.09
TRAV5-201ENST00000390427 NECTIN2Q92692 538 aa8.27□□□□□ -1.09
TRAV5-201ENST00000390427 ZNF622Q969S3 477 aaKnown RBP eCLIP8.27□□□□□ -1.09
TRAV5-201ENST00000390427 BRIP1Q9BX63 1249 aa8.27□□□□□ -1.09
TRAV5-201ENST00000390427 DACT1Q9NYF0 836 aa8.27□□□□□ -1.09
TRAV5-201ENST00000390427 PLA2G2EQ9NZK7 142 aa8.27□□□□□ -1.09
TRAV5-201ENST00000390427 CHPF2Q9P2E5 772 aa8.27□□□□□ -1.09
TRAV5-201ENST00000390427 CARMIL3Q8ND23 1372 aa8.26□□□□□ -1.09
TRAV5-201ENST00000390427 SCN11AQ9UI33 1791 aa8.26□□□□□ -1.09
TRAV5-201ENST00000390427 A0A087WZG4 1122 aa8.26□□□□□ -1.09
TRAV5-201ENST00000390427 C21orf2O43822 256 aa8.26□□□□□ -1.09
TRAV5-201ENST00000390427 DDNO94850 711 aaPredicted RBP8.26□□□□□ -1.09
TRAV5-201ENST00000390427 DDX58O95786 925 aaKnown RBP8.26□□□□□ -1.09
TRAV5-201ENST00000390427 HMGB1P09429 215 aaKnown RBP8.26□□□□□ -1.09
TRAV5-201ENST00000390427 KCNJ4P48050 445 aa8.26□□□□□ -1.09
TRAV5-201ENST00000390427 VEGFBP49765 207 aa8.26□□□□□ -1.09
TRAV5-201ENST00000390427 LBX1P52954 281 aa8.26□□□□□ -1.09
TRAV5-201ENST00000390427 RESTQ13127 1097 aa8.26□□□□□ -1.09
TRAV5-201ENST00000390427 NMIQ13287 307 aaPredicted RBP8.26□□□□□ -1.09
TRAV5-201ENST00000390427 ATP2B3Q16720 1220 aa8.26□□□□□ -1.09
TRAV5-201ENST00000390427 SLFNL1Q499Z3 407 aa8.26□□□□□ -1.09
TRAV5-201ENST00000390427 ANO6Q4KMQ2 910 aa8.26□□□□□ -1.09
TRAV5-201ENST00000390427 CDC37L1Q7L3B6 337 aa8.26□□□□□ -1.09
TRAV5-201ENST00000390427 CCDC186Q7Z3E2 898 aa8.26□□□□□ -1.09
TRAV5-201ENST00000390427 NECAB1Q8N987 351 aa8.26□□□□□ -1.09
TRAV5-201ENST00000390427 GTF3C6Q969F1 213 aa8.26□□□□□ -1.09
TRAV5-201ENST00000390427 CNKSR1Q969H4 720 aa8.26□□□□□ -1.09
TRAV5-201ENST00000390427 ABHD8Q96I13 439 aa8.26□□□□□ -1.09
TRAV5-201ENST00000390427 SLC52A2Q9HAB3 445 aa8.26□□□□□ -1.09
TRAV5-201ENST00000390427 C9orf78Q9NZ63 289 aaPredicted RBP8.26□□□□□ -1.09
TRAV5-201ENST00000390427 RCOR1Q9UKL0 485 aa8.26□□□□□ -1.09
TRAV5-201ENST00000390427 ZBTB1Q9Y2K1 713 aa8.26□□□□□ -1.09
TRAV5-201ENST00000390427 FER1L6Q2WGJ9 1857 aa8.26□□□□□ -1.09
TRAV5-201ENST00000390427 SCN4AP35499 1836 aa8.25□□□□□ -1.09
TRAV5-201ENST00000390427 BTBD11A6QL63 1104 aa8.25□□□□□ -1.09
TRAV5-201ENST00000390427 GRM8O00222 908 aa8.25□□□□□ -1.09
TRAV5-201ENST00000390427 TAF5LO75529 589 aa8.25□□□□□ -1.09
TRAV5-201ENST00000390427 SASH1O94885 1247 aa8.25□□□□□ -1.09
TRAV5-201ENST00000390427 TNNT1P13805 278 aa8.25□□□□□ -1.09
TRAV5-201ENST00000390427 CPA1P15085 419 aa8.25□□□□□ -1.09
TRAV5-201ENST00000390427 ATP5JP18859 108 aa8.25□□□□□ -1.09
TRAV5-201ENST00000390427 EIF2S2P20042 333 aaKnown RBP8.25□□□□□ -1.09
TRAV5-201ENST00000390427 KCNJ6P48051 423 aa8.25□□□□□ -1.09
TRAV5-201ENST00000390427 ZNF165P49910 485 aa8.25□□□□□ -1.09
TRAV5-201ENST00000390427 MAP2K1Q02750 393 aaPredicted RBP8.25□□□□□ -1.09
TRAV5-201ENST00000390427 MLLT1Q03111 559 aaPredicted RBP8.25□□□□□ -1.09
TRAV5-201ENST00000390427 NCBP1Q09161 790 aaKnown RBP8.25□□□□□ -1.09
TRAV5-201ENST00000390427 TOB2Q14106 344 aaPredicted RBP8.25□□□□□ -1.09
TRAV5-201ENST00000390427 IQCB1Q15051 598 aa8.25□□□□□ -1.09
TRAV5-201ENST00000390427 STX1AQ16623 288 aa8.25□□□□□ -1.09
TRAV5-201ENST00000390427 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.25□□□□□ -1.09
TRAV5-201ENST00000390427 LUZP1Q86V48 1076 aa8.25□□□□□ -1.09
TRAV5-201ENST00000390427 SPC24Q8NBT2 197 aa8.25□□□□□ -1.09
TRAV5-201ENST00000390427 CCDC112Q8NEF3 446 aa8.25□□□□□ -1.09
TRAV5-201ENST00000390427 SMARCC2Q8TAQ2 1214 aa8.25□□□□□ -1.09
TRAV5-201ENST00000390427 TRIM5Q9C035 493 aa8.25□□□□□ -1.09
TRAV5-201ENST00000390427 TAF1DQ9H5J8 278 aaPredicted RBP8.25□□□□□ -1.09
TRAV5-201ENST00000390427 CTNNA3Q9UI47 895 aa8.25□□□□□ -1.09
TRAV5-201ENST00000390427 DDX41Q9UJV9 622 aaKnown RBP8.25□□□□□ -1.09
TRAV5-201ENST00000390427 HPS5Q9UPZ3 1129 aa8.25□□□□□ -1.09
TRAV5-201ENST00000390427 MAP3K2Q9Y2U5 619 aa8.25□□□□□ -1.09
TRAV5-201ENST00000390427 MORC2Q9Y6X9 1032 aaPredicted RBP8.25□□□□□ -1.09
TRAV5-201ENST00000390427 RASSF10A6NK89 507 aa8.24□□□□□ -1.09
TRAV5-201ENST00000390427 GOLGA6L19H0YKK7 550 aa8.24□□□□□ -1.09
TRAV5-201ENST00000390427 RNMTO43148 476 aaKnown RBP8.24□□□□□ -1.09
TRAV5-201ENST00000390427 PFKFB2O60825 505 aa8.24□□□□□ -1.09
TRAV5-201ENST00000390427 STARD3NLO95772 234 aa8.24□□□□□ -1.09
TRAV5-201ENST00000390427 HSPA8P11142 646 aaKnown RBP8.24□□□□□ -1.09
TRAV5-201ENST00000390427 GSDMDP57764 484 aa8.24□□□□□ -1.09
TRAV5-201ENST00000390427 CBX1P83916 185 aa8.24□□□□□ -1.09
TRAV5-201ENST00000390427 TEFQ10587 303 aa8.24□□□□□ -1.09
TRAV5-201ENST00000390427 STYK1Q6J9G0 422 aa8.24□□□□□ -1.09
TRAV5-201ENST00000390427 BICDL1Q6ZP65 573 aa8.24□□□□□ -1.09
TRAV5-201ENST00000390427 DRC7Q8IY82 874 aa8.24□□□□□ -1.09
TRAV5-201ENST00000390427 PXYLP1Q8TE99 480 aa8.24□□□□□ -1.09
TRAV5-201ENST00000390427 TSC1Q92574 1164 aa8.24□□□□□ -1.09
TRAV5-201ENST00000390427 EAF2Q96CJ1 260 aaPredicted RBP8.24□□□□□ -1.09
TRAV5-201ENST00000390427 PGBD1Q96JS3 809 aa8.24□□□□□ -1.09
TRAV5-201ENST00000390427 ZNF396Q96N95 335 aaPredicted RBP8.24□□□□□ -1.09
TRAV5-201ENST00000390427 COPRSQ9NQ92 184 aa8.24□□□□□ -1.09
TRAV5-201ENST00000390427 DDX21Q9NR30 783 aaKnown RBP eCLIP8.24□□□□□ -1.09
TRAV5-201ENST00000390427 ANO10Q9NW15 660 aa8.24□□□□□ -1.09
TRAV5-201ENST00000390427 FAM53CQ9NYF3 392 aa8.24□□□□□ -1.09
TRAV5-201ENST00000390427 IMPACTQ9P2X3 320 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms